RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 GOLGA8DPQ0D2H9 430 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 POTEAQ6S8J7 498 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 COA7Q96BR5 231 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 C21orf2O43822 256 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 SERPINC1P01008 464 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 TOP1P11387 765 aaKnown RBP14.12□□□□□ -0.15
RNF4-201ENST00000314289 FANCCQ00597 558 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 MYL5Q02045 173 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 LRRC8AQ8IWT6 810 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 BARHL2Q9NY43 387 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 MTMR4Q9NYA4 1195 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 SLX4Q8IY92 1834 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 LRRC37AA6NMS7 1700 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 ZBTB22O15209 634 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 GNAQP50148 359 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 JAKMIP3Q5VZ66 844 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 TTBK2Q6IQ55 1244 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 FLAD1Q8NFF5 587 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 UIMC1Q96RL1 719 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 TMEM260Q9NX78 707 aa14.12□□□□□ -0.15
RNF4-201ENST00000314289 BIN2Q9UBW5 565 aaPredicted RBP14.12□□□□□ -0.15
RNF4-201ENST00000314289 SMCO2A6NFE2 343 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 PDHBP11177 359 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 CALML3P27482 149 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 KARSQ15046 597 aaKnown RBP14.11□□□□□ -0.15
RNF4-201ENST00000314289 PAGE5Q96GU1 130 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 GTPBP4Q9BZE4 634 aaKnown RBP14.11□□□□□ -0.15
RNF4-201ENST00000314289 OSBPL5Q9H0X9 879 aaPredicted RBP14.11□□□□□ -0.15
RNF4-201ENST00000314289 RGS17Q9UGC6 210 aaPredicted RBP14.11□□□□□ -0.15
RNF4-201ENST00000314289 DDTLA6NHG4 134 aaPredicted RBP14.11□□□□□ -0.15
RNF4-201ENST00000314289 SMTNL1A8MU46 457 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 TMEM232C9JQI7 657 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 GABPAQ06546 454 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 NAA30Q147X3 362 aaPredicted RBP14.11□□□□□ -0.15
RNF4-201ENST00000314289 SLC15A2Q16348 729 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 LETM2Q2VYF4 491 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 CFAP100Q494V2 611 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 KCTD1Q719H9 257 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 ANKRD7Q92527 254 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 BPIFA3Q9BQP9 254 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 HOOK1Q9UJC3 728 aaKnown RBP14.11□□□□□ -0.15
RNF4-201ENST00000314289 SCN9AQ15858 1988 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 USP27XA6NNY8 438 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 SHMT1P34896 483 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 CCDC178Q5BJE1 867 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 DEFB132Q7Z7B7 95 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 CERS3Q8IU89 383 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 RASSF8Q8NHQ8 419 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 ZNF592Q92610 1267 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 FERMT2Q96AC1 680 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 RRP36Q96EU6 259 aaKnown RBP14.11□□□□□ -0.15
RNF4-201ENST00000314289 MED15Q96RN5 788 aa14.11□□□□□ -0.15
RNF4-201ENST00000314289 TRMT1Q9NXH9 659 aaKnown RBP14.11□□□□□ -0.15
RNF4-201ENST00000314289 SEC63Q9UGP8 760 aaKnown RBP14.11□□□□□ -0.15
RNF4-201ENST00000314289 SKILP12757 684 aa14.1□□□□□ -0.15
RNF4-201ENST00000314289 CDC25BP30305 580 aa14.1□□□□□ -0.15
RNF4-201ENST00000314289 TPM4P67936 248 aa14.1□□□□□ -0.15
RNF4-201ENST00000314289 NCBP1Q09161 790 aaKnown RBP14.1□□□□□ -0.15
RNF4-201ENST00000314289 MAPK8IP1Q9UQF2 711 aa14.1□□□□□ -0.15
RNF4-201ENST00000314289 SLFN14P0C7P3 912 aa14.1□□□□□ -0.15
RNF4-201ENST00000314289 UBASH3AP57075 661 aa14.1□□□□□ -0.15
RNF4-201ENST00000314289 TDRD3Q9H7E2 651 aaKnown RBP14.1□□□□□ -0.15
RNF4-201ENST00000314289 DNAJC18Q9H819 358 aa14.1□□□□□ -0.15
RNF4-201ENST00000314289 SAMSN1Q9NSI8 373 aaKnown RBP14.1□□□□□ -0.15
RNF4-201ENST00000314289 NFE2L3Q9Y4A8 694 aa14.1□□□□□ -0.15
RNF4-201ENST00000314289 M0R2N6 131 aa14.09□□□□□ -0.15
RNF4-201ENST00000314289 TNNT1P13805 278 aa14.09□□□□□ -0.15
RNF4-201ENST00000314289 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
RNF4-201ENST00000314289 SARSP49591 514 aaKnown RBP14.09□□□□□ -0.15
RNF4-201ENST00000314289 PODNQ7Z5L7 613 aa14.09□□□□□ -0.15
RNF4-201ENST00000314289 MTRQ99707 1265 aa14.09□□□□□ -0.15
RNF4-201ENST00000314289 CTIFO43310 598 aaKnown RBP14.09□□□□□ -0.15
RNF4-201ENST00000314289 CCNT1O60563 726 aaKnown RBP14.09□□□□□ -0.15
RNF4-201ENST00000314289 MORC3Q14149 939 aa14.09□□□□□ -0.15
RNF4-201ENST00000314289 CCDC96Q2M329 555 aa14.09□□□□□ -0.15
RNF4-201ENST00000314289 DACT2Q5SW24 774 aa14.09□□□□□ -0.15
RNF4-201ENST00000314289 C4orf32Q8N8J7 132 aa14.09□□□□□ -0.15
RNF4-201ENST00000314289 IKBKBO14920 756 aa14.09□□□□□ -0.15
RNF4-201ENST00000314289 GDF11O95390 407 aa14.09□□□□□ -0.15
RNF4-201ENST00000314289 CUL4BQ13620 913 aa14.09□□□□□ -0.15
RNF4-201ENST00000314289 CREBRFQ8IUR6 639 aa14.09□□□□□ -0.15
RNF4-201ENST00000314289 CCDC148Q8NFR7 591 aa14.09□□□□□ -0.15
RNF4-201ENST00000314289 CDK11BP21127 795 aaKnown RBP14.08□□□□□ -0.16
RNF4-201ENST00000314289 TPD52L1Q16890 204 aaPredicted RBP14.08□□□□□ -0.16
RNF4-201ENST00000314289 SPZ1Q9BXG8 430 aa14.08□□□□□ -0.16
RNF4-201ENST00000314289 SH3GLB2Q9NR46 395 aa14.08□□□□□ -0.16
RNF4-201ENST00000314289 HLA-DOAP06340 250 aa14.08□□□□□ -0.16
RNF4-201ENST00000314289 SNAP25P60880 206 aa14.08□□□□□ -0.16
RNF4-201ENST00000314289 SOGA3Q5TF21 947 aa14.08□□□□□ -0.16
RNF4-201ENST00000314289 ARMCX5Q6P1M9 558 aa14.08□□□□□ -0.16
RNF4-201ENST00000314289 HHIPL2Q6UWX4 724 aa14.08□□□□□ -0.16
RNF4-201ENST00000314289 SH3BP5LQ7L8J4 393 aa14.08□□□□□ -0.16
RNF4-201ENST00000314289 FAM198AQ9UFP1 575 aa14.08□□□□□ -0.16
RNF4-201ENST00000314289 SCAF8Q9UPN6 1271 aaKnown RBP14.08□□□□□ -0.16
RNF4-201ENST00000314289 PPIP5K2O43314 1243 aa14.07□□□□□ -0.16
RNF4-201ENST00000314289 TTLL1O95922 423 aa14.07□□□□□ -0.16
RNF4-201ENST00000314289 BMP15O95972 392 aa14.07□□□□□ -0.16
RNF4-201ENST00000314289 TRAPPC10P48553 1259 aa14.07□□□□□ -0.16
RNF4-201ENST00000314289 ZNF771Q7L3S4 317 aaPredicted RBP14.07□□□□□ -0.16
RNF4-201ENST00000314289 SUGT1Q9Y2Z0 365 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms