RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 NELFBQ8WX92 580 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 ERO1AQ96HE7 468 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 BIN2Q9UBW5 565 aaPredicted RBP13.05□□□□□ -0.32
PTPN2-201ENST00000309660 SCN7AQ01118 1682 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 SMCO2A6NFE2 343 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 MYO1BO43795 1136 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 IGSF3O75054 1194 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 RPN1P04843 607 aaKnown RBP13.05□□□□□ -0.32
PTPN2-201ENST00000309660 ATP2B4P23634 1241 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 NR1I3Q14994 352 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 PIGSQ96S52 555 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 IRX2Q9BZI1 471 aaPredicted RBP13.05□□□□□ -0.32
PTPN2-201ENST00000309660 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
PTPN2-201ENST00000309660 MPHOSPH10O00566 681 aaKnown RBP13.04□□□□□ -0.32
PTPN2-201ENST00000309660 SLURP2P0DP57 97 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 CASP14P31944 242 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 PAK1Q13153 545 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 TBC1D16Q8TBP0 767 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 CGNQ9P2M7 1197 aaKnown RBP13.04□□□□□ -0.32
PTPN2-201ENST00000309660 IRS2Q9Y4H2 1338 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 GTPBP6O43824 516 aaPredicted RBP13.04□□□□□ -0.32
PTPN2-201ENST00000309660 E2F4Q16254 413 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 PDXDC2PQ6P474 469 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 REXO1L1PQ8IX06 675 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 ZSWIM4Q9H7M6 989 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 BARHL2Q9NY43 387 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 A0A1B0GTH6 734 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 USP17L5A8MUK1 530 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 STXBP3O00186 592 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 TMEM139Q8IV31 216 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 ANKRD20A12PQ8NF67 263 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 RRP36Q96EU6 259 aaKnown RBP13.04□□□□□ -0.32
PTPN2-201ENST00000309660 NUP88Q99567 741 aaPredicted RBP13.04□□□□□ -0.32
PTPN2-201ENST00000309660 CARD6Q9BX69 1037 aa13.04□□□□□ -0.32
PTPN2-201ENST00000309660 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.04□□□□□ -0.321e-6■■□□□ 12.1
PTPN2-201ENST00000309660 TPM1P09493 284 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 LONP1P36776 959 aaKnown RBP13.03□□□□□ -0.32
PTPN2-201ENST00000309660 TECP42680 631 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 PPP4CP60510 307 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 CCDC178Q5BJE1 867 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 WDR24Q96S15 920 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 BTAF1O14981 1849 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 A0A1B0GUL6 1792 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 STX10O60499 249 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 CASQ1P31415 396 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 PRCPP42785 496 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 KRT31Q15323 416 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 FBXO38Q6PIJ6 1188 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 COA7Q96BR5 231 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 TCP11L1Q9NUJ3 509 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 TMEM260Q9NX78 707 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 RGL2O15211 777 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 DDR1Q08345 913 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 TBX2Q13207 712 aaPredicted RBP13.03□□□□□ -0.32
PTPN2-201ENST00000309660 KMT5BQ4FZB7 885 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 ARHGAP29Q52LW3 1261 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 UBXN4Q92575 508 aa13.03□□□□□ -0.32
PTPN2-201ENST00000309660 ADD3Q9UEY8 706 aaKnown RBP13.03□□□□□ -0.32
PTPN2-201ENST00000309660 GPR75-ASB3A0A0A6YYF3 556 aa13.02□□□□□ -0.32
PTPN2-201ENST00000309660 A0A0U1RQJ8 604 aa13.02□□□□□ -0.32
PTPN2-201ENST00000309660 PALM3A6NDB9 673 aaPredicted RBP13.02□□□□□ -0.32
PTPN2-201ENST00000309660 TXKP42681 527 aa13.02□□□□□ -0.32
PTPN2-201ENST00000309660 DPP8Q6V1X1 898 aaPredicted RBP13.02□□□□□ -0.32
PTPN2-201ENST00000309660 CCDC12Q8WUD4 166 aaPredicted RBP13.02□□□□□ -0.32
PTPN2-201ENST00000309660 ATRIPQ8WXE1 791 aa13.02□□□□□ -0.32
PTPN2-201ENST00000309660 TRIM47Q96LD4 638 aa13.02□□□□□ -0.32
PTPN2-201ENST00000309660 CTAGE1Q96RT6 745 aa13.02□□□□□ -0.32
PTPN2-201ENST00000309660 ZC3H12CQ9C0D7 883 aaKnown RBP13.02□□□□□ -0.32
PTPN2-201ENST00000309660 EPC1Q9H2F5 836 aa13.02□□□□□ -0.32
PTPN2-201ENST00000309660 C6orf50Q9HD87 102 aa13.02□□□□□ -0.32
PTPN2-201ENST00000309660 TTF2Q9UNY4 1162 aaKnown RBP13.02□□□□□ -0.32
PTPN2-201ENST00000309660 TNRC6CQ9HCJ0 1690 aaKnown RBP13.02□□□□□ -0.33
PTPN2-201ENST00000309660 PLCG2P16885 1265 aa13.02□□□□□ -0.33
PTPN2-201ENST00000309660 NONOQ15233 471 aaKnown RBP eCLIP13.02□□□□□ -0.339e-6■■■□□ 19
PTPN2-201ENST00000309660 ARL6IP4Q66PJ3 421 aaKnown RBP13.02□□□□□ -0.33
PTPN2-201ENST00000309660 TRIM65Q6PJ69 517 aa13.02□□□□□ -0.33
PTPN2-201ENST00000309660 ZMYND15Q9H091 742 aa13.02□□□□□ -0.33
PTPN2-201ENST00000309660 KCNJ18B7U540 433 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 FANCGO15287 622 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 ERCC3P19447 782 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 KCNJ6P48051 423 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 FXR1P51114 621 aaKnown RBP eCLIP13.01□□□□□ -0.33
PTPN2-201ENST00000309660 UBXN1Q04323 297 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 KCNJ12Q14500 433 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 C16orf86Q6ZW13 317 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 C4orf32Q8N8J7 132 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 TBCKQ8TEA7 893 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 SH3GLB2Q9NR46 395 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 RMND1Q9NWS8 449 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 DAGLAQ9Y4D2 1042 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 BBOX1O75936 387 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 CCDC175P0C221 793 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 RHBDL3P58872 404 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 TXNRD1Q16881 649 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 ZNF658Q5TYW1 1059 aaPredicted RBP13.01□□□□□ -0.33
PTPN2-201ENST00000309660 CABP7Q86V35 215 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
PTPN2-201ENST00000309660 NEDD1Q8NHV4 660 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms