RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 BRF1Q92994 677 aa20.86■□□□□ 0.93
SSSCA1-201ENST00000309328 KLF18A0A0U1RQI7 1052 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 PALM3A6NDB9 673 aaPredicted RBP20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 GPR25O00155 361 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 VWA5AO00534 786 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 ATP2A1O14983 1001 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 CPA1P15085 419 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 NEK4P51957 841 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 SP3Q02447 781 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 TRAF1Q13077 416 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 SYDE2Q5VT97 1194 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 NUP133Q8WUM0 1156 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 KIFC2Q96AC6 838 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 TCEANC2Q96MN5 208 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 SLC38A10Q9HBR0 1119 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 SENP2Q9HC62 589 aa20.85■□□□□ 0.93
SSSCA1-201ENST00000309328 FKTNO75072 461 aa20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 ERVK-9P63128 1117 aa20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 ERVK-24P63145 666 aa20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 COL9A3Q14050 684 aaPredicted RBP20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 FANCBQ8NB91 859 aa20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 CHMP4CQ96CF2 233 aa20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 ATG4CQ96DT6 458 aa20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 ZNF274Q96GC6 653 aaPredicted RBP20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 ERO1AQ96HE7 468 aa20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 GPCPD1Q9NPB8 672 aa20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 GPHNQ9NQX3 736 aaPredicted RBP20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 FBXO28Q9NVF7 368 aa20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 MAD2L2Q9UI95 211 aa20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 NID2Q14112 1375 aa20.84■□□□□ 0.93
SSSCA1-201ENST00000309328 FRMPD2Q68DX3 1309 aaPredicted RBP20.83■□□□□ 0.93
SSSCA1-201ENST00000309328 KLRF2D3W0D1 207 aa20.83■□□□□ 0.93
SSSCA1-201ENST00000309328 ST18O60284 1047 aa20.83■□□□□ 0.93
SSSCA1-201ENST00000309328 GNRH1P01148 92 aa20.83■□□□□ 0.93
SSSCA1-201ENST00000309328 MICU3Q86XE3 530 aa20.83■□□□□ 0.93
SSSCA1-201ENST00000309328 ANKRD13CQ8N6S4 541 aa20.83■□□□□ 0.93
SSSCA1-201ENST00000309328 TEX13BQ9BXU2 312 aa20.83■□□□□ 0.93
SSSCA1-201ENST00000309328 RBPJLQ9UBG7 517 aa20.83■□□□□ 0.93
SSSCA1-201ENST00000309328 CPA4Q9UI42 421 aa20.83■□□□□ 0.93
SSSCA1-201ENST00000309328 PRR12Q9ULL5 1215 aa20.83■□□□□ 0.93
SSSCA1-201ENST00000309328 GOLGA8BA8MQT2 603 aa20.82■□□□□ 0.92
SSSCA1-201ENST00000309328 SLC25A27O95847 323 aa20.82■□□□□ 0.92
SSSCA1-201ENST00000309328 MAPK4P31152 587 aa20.82■□□□□ 0.92
SSSCA1-201ENST00000309328 METAP2P50579 478 aaKnown RBP eCLIP20.82■□□□□ 0.92
SSSCA1-201ENST00000309328 TOB2Q14106 344 aaPredicted RBP20.82■□□□□ 0.92
SSSCA1-201ENST00000309328 RTN1Q16799 776 aa20.82■□□□□ 0.92
SSSCA1-201ENST00000309328 CCAR1Q8IX12 1150 aaKnown RBP20.82■□□□□ 0.92
SSSCA1-201ENST00000309328 SHCBP1Q8NEM2 672 aa20.82■□□□□ 0.92
SSSCA1-201ENST00000309328 PAGR1Q9BTK6 254 aa20.82■□□□□ 0.92
SSSCA1-201ENST00000309328 SPZ1Q9BXG8 430 aa20.82■□□□□ 0.92
SSSCA1-201ENST00000309328 SPATC1LQ9H0A9 340 aa20.82■□□□□ 0.92
SSSCA1-201ENST00000309328 RANBP17Q9H2T7 1088 aaKnown RBP20.82■□□□□ 0.92
SSSCA1-201ENST00000309328 GOLGA8AA7E2F4 631 aa20.81■□□□□ 0.92
SSSCA1-201ENST00000309328 FOXN1O15353 648 aa20.81■□□□□ 0.92
SSSCA1-201ENST00000309328 DHX16O60231 1041 aaKnown RBP20.81■□□□□ 0.92
SSSCA1-201ENST00000309328 HSPA8P11142 646 aaKnown RBP20.81■□□□□ 0.92
SSSCA1-201ENST00000309328 APOBRQ0VD83 1088 aa20.81■□□□□ 0.92
SSSCA1-201ENST00000309328 KIF2CQ99661 725 aa20.81■□□□□ 0.92
SSSCA1-201ENST00000309328 BRPF3Q9ULD4 1205 aa20.81■□□□□ 0.92
SSSCA1-201ENST00000309328 NAP1L2Q9ULW6 460 aaPredicted RBP20.81■□□□□ 0.92
SSSCA1-201ENST00000309328 GOLGA8HP0CJ92 632 aa20.8■□□□□ 0.92
SSSCA1-201ENST00000309328 MCM2P49736 904 aa20.8■□□□□ 0.92
SSSCA1-201ENST00000309328 LACTBP83111 547 aaPredicted RBP20.8■□□□□ 0.92
SSSCA1-201ENST00000309328 TKFCQ3LXA3 575 aa20.8■□□□□ 0.92
SSSCA1-201ENST00000309328 TTBK2Q6IQ55 1244 aa20.8■□□□□ 0.92
SSSCA1-201ENST00000309328 SAMD1Q6SPF0 538 aaPredicted RBP20.8■□□□□ 0.92
SSSCA1-201ENST00000309328 RIOX2Q8IUF8 465 aa20.8■□□□□ 0.92
SSSCA1-201ENST00000309328 REPS2Q8NFH8 660 aa20.8■□□□□ 0.92
SSSCA1-201ENST00000309328 MROH8Q9H579 483 aa20.8■□□□□ 0.92
SSSCA1-201ENST00000309328 RBM27Q9P2N5 1060 aaKnown RBP20.8■□□□□ 0.92
SSSCA1-201ENST00000309328 SLC16A2P36021 539 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 STAT3P40763 770 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 AK2P54819 239 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 FCGRTP55899 365 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 TMEM132BQ14DG7 1078 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 CPLX2Q6PUV4 134 aaKnown RBP20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 RASGRP2Q7LDG7 609 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 ZNF296Q8WUU4 475 aaPredicted RBP20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 MYL10Q9BUA6 226 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 MAF1Q9H063 256 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 R3HDMLQ9H3Y0 253 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 RIOX1Q9H6W3 641 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 TXNRD2Q9NNW7 524 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 PRDM10Q9NQV6 1147 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 BTBD7Q9P203 1132 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 FBXO40Q9UH90 709 aa20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 ZNF214Q9UL59 606 aaPredicted RBP20.79■□□□□ 0.92
SSSCA1-201ENST00000309328 CNMDO75829 334 aa20.78■□□□□ 0.92
SSSCA1-201ENST00000309328 ICAM1P05362 532 aa20.78■□□□□ 0.92
SSSCA1-201ENST00000309328 HOXD10P28358 340 aa20.78■□□□□ 0.92
SSSCA1-201ENST00000309328 PDIA3P30101 505 aaKnown RBP20.78■□□□□ 0.92
SSSCA1-201ENST00000309328 PLS1Q14651 629 aa20.78■□□□□ 0.92
SSSCA1-201ENST00000309328 TMTC3Q6ZXV5 915 aa20.78■□□□□ 0.92
SSSCA1-201ENST00000309328 ADGRF4Q8IZF3 695 aa20.78■□□□□ 0.92
SSSCA1-201ENST00000309328 STAG2Q8N3U4 1231 aa20.78■□□□□ 0.92
SSSCA1-201ENST00000309328 CWC22Q9HCG8 908 aaKnown RBP20.78■□□□□ 0.92
SSSCA1-201ENST00000309328 STRNO43815 780 aa20.77■□□□□ 0.92
SSSCA1-201ENST00000309328 PRMT2P55345 433 aa20.77■□□□□ 0.92
SSSCA1-201ENST00000309328 SNRNP48Q6IEG0 339 aaKnown RBP20.77■□□□□ 0.92
SSSCA1-201ENST00000309328 CHST13Q8NET6 341 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms