RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 USP4Q13107 963 aa11.66□□□□□ -0.54
MSRB3-201ENST00000308259 TMEM67Q5HYA8 995 aa11.66□□□□□ -0.54
MSRB3-201ENST00000308259 FOXP4Q8IVH2 680 aaPredicted RBP11.66□□□□□ -0.54
MSRB3-201ENST00000308259 FAXDC2Q96IV6 333 aa11.66□□□□□ -0.54
MSRB3-201ENST00000308259 SPAG5Q96R06 1193 aa11.66□□□□□ -0.54
MSRB3-201ENST00000308259 HSD3B7Q9H2F3 369 aa11.66□□□□□ -0.54
MSRB3-201ENST00000308259 GOLGA8AA7E2F4 631 aa11.65□□□□□ -0.54
MSRB3-201ENST00000308259 GNPATO15228 680 aa11.65□□□□□ -0.54
MSRB3-201ENST00000308259 IRAK1P51617 712 aa11.65□□□□□ -0.54
MSRB3-201ENST00000308259 HIBCHQ6NVY1 386 aaPredicted RBP11.65□□□□□ -0.54
MSRB3-201ENST00000308259 IRX2Q9BZI1 471 aaPredicted RBP11.65□□□□□ -0.54
MSRB3-201ENST00000308259 ARMT1Q9H993 441 aa11.65□□□□□ -0.54
MSRB3-201ENST00000308259 BTBD18B2RXH4 712 aa11.65□□□□□ -0.54
MSRB3-201ENST00000308259 TUBBP07437 444 aa11.65□□□□□ -0.54
MSRB3-201ENST00000308259 GGCXP38435 758 aa11.65□□□□□ -0.54
MSRB3-201ENST00000308259 SLC39A14Q15043 492 aa11.65□□□□□ -0.54
MSRB3-201ENST00000308259 APOA5Q6Q788 366 aa11.65□□□□□ -0.54
MSRB3-201ENST00000308259 MCM8Q9UJA3 840 aa11.65□□□□□ -0.54
MSRB3-201ENST00000308259 CPDO75976 1380 aa11.65□□□□□ -0.54
MSRB3-201ENST00000308259 ARFGEF2Q9Y6D5 1785 aa11.65□□□□□ -0.54
MSRB3-201ENST00000308259 MEFVO15553 781 aaPredicted RBP11.65□□□□□ -0.55
MSRB3-201ENST00000308259 CIAO1O76071 339 aa11.65□□□□□ -0.55
MSRB3-201ENST00000308259 PYGLP06737 847 aa11.65□□□□□ -0.55
MSRB3-201ENST00000308259 CMA1P23946 247 aa11.65□□□□□ -0.55
MSRB3-201ENST00000308259 TPP2P29144 1249 aaPredicted RBP11.65□□□□□ -0.55
MSRB3-201ENST00000308259 TBC1D8BQ0IIM8 1120 aa11.65□□□□□ -0.55
MSRB3-201ENST00000308259 ATL3Q6DD88 541 aa11.65□□□□□ -0.55
MSRB3-201ENST00000308259 MIGA1Q8NAN2 632 aa11.65□□□□□ -0.55
MSRB3-201ENST00000308259 C3orf20Q8ND61 904 aa11.65□□□□□ -0.55
MSRB3-201ENST00000308259 ZNF483Q8TF39 744 aaPredicted RBP11.65□□□□□ -0.55
MSRB3-201ENST00000308259 IARSP41252 1262 aaKnown RBP11.64□□□□□ -0.55
MSRB3-201ENST00000308259 SEPT14Q6ZU15 432 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 BRAPQ7Z569 592 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 CPLX4Q7Z7G2 160 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 AIDAQ96BJ3 306 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 CDC23Q9UJX2 597 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 PCDHA5Q9Y5H7 936 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 IFIT3O14879 490 aaKnown RBP11.64□□□□□ -0.55
MSRB3-201ENST00000308259 FANCGO15287 622 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 ZBTB43O43298 467 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 CASP1P29466 404 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 BEND6Q5SZJ8 279 aaPredicted RBP11.64□□□□□ -0.55
MSRB3-201ENST00000308259 METTL16Q86W50 562 aaKnown RBP11.64□□□□□ -0.55
MSRB3-201ENST00000308259 LMBR1Q8WVP7 490 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 NLRP3Q96P20 1036 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 ISCA1Q9BUE6 129 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 OSBPL5Q9H0X9 879 aaPredicted RBP11.64□□□□□ -0.55
MSRB3-201ENST00000308259 TACC3Q9Y6A5 838 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 NR5A1Q13285 461 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 DIXDC1Q155Q3 683 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 PREPLQ4J6C6 727 aaPredicted RBP11.64□□□□□ -0.55
MSRB3-201ENST00000308259 GSPT2Q8IYD1 628 aaKnown RBP11.64□□□□□ -0.55
MSRB3-201ENST00000308259 MAGEB6Q8N7X4 407 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 MIPOL1Q8TD10 442 aa11.64□□□□□ -0.55
MSRB3-201ENST00000308259 SH2B2O14492 632 aaPredicted RBP11.63□□□□□ -0.55
MSRB3-201ENST00000308259 ADD2P35612 726 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 RPS6KA3P51812 740 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.63□□□□□ -0.55
MSRB3-201ENST00000308259 GUCA1BQ9UMX6 200 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 ZFYP08048 801 aaPredicted RBP11.63□□□□□ -0.55
MSRB3-201ENST00000308259 PDE6AP16499 860 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 BMP6P22004 513 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 TRIM29Q14134 588 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 CCDC102BQ68D86 513 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 USP49Q70CQ1 688 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 ZCWPW1Q9H0M4 648 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 JADE2Q9NQC1 790 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 PFDN1O60925 122 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 MBD4O95243 580 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 DNA2P51530 1060 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 CCDC152Q4G0S7 254 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 CCDC93Q567U6 631 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 TTLL11Q8NHH1 800 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 PNKPQ96T60 521 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 SLC40A1Q9NP59 571 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 ZSWIM5Q9P217 1185 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 KCNH3Q9ULD8 1083 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 LRRD1A4D1F6 860 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 IRS4O14654 1257 aaPredicted RBP11.63□□□□□ -0.55
MSRB3-201ENST00000308259 KLHL10Q6JEL2 608 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 BARGINQ6ZT62 677 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 CCDC170Q8IYT3 715 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 WDR66Q8TBY9 1149 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 NAPGQ99747 312 aaPredicted RBP11.63□□□□□ -0.55
MSRB3-201ENST00000308259 NIP7Q9Y221 180 aaKnown RBP eCLIP11.63□□□□□ -0.55
MSRB3-201ENST00000308259 ZMYM6O95789 1325 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 UBN2Q6ZU65 1347 aa11.63□□□□□ -0.55
MSRB3-201ENST00000308259 PECAM1P16284 738 aaPredicted RBP11.62□□□□□ -0.55
MSRB3-201ENST00000308259 USP5P45974 858 aa11.62□□□□□ -0.55
MSRB3-201ENST00000308259 NSMCE1Q8WV22 266 aa11.62□□□□□ -0.55
MSRB3-201ENST00000308259 TCHPQ9BT92 498 aa11.62□□□□□ -0.55
MSRB3-201ENST00000308259 HAUS2Q9NVX0 235 aa11.62□□□□□ -0.55
MSRB3-201ENST00000308259 POLR2DO15514 142 aaKnown RBP11.62□□□□□ -0.55
MSRB3-201ENST00000308259 PTPAQ15257 358 aa11.62□□□□□ -0.55
MSRB3-201ENST00000308259 PIGBQ92521 554 aa11.62□□□□□ -0.55
MSRB3-201ENST00000308259 PCMTD1Q96MG8 357 aaPredicted RBP11.62□□□□□ -0.55
MSRB3-201ENST00000308259 SLC12A7Q9Y666 1083 aa11.62□□□□□ -0.55
MSRB3-201ENST00000308259 FAM205CA6NFA0 338 aa11.62□□□□□ -0.55
MSRB3-201ENST00000308259 CUTAO60888 179 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms