RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 ATG3Q9NT62 314 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 SAMM50Q9Y512 469 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 WDR17Q8IZU2 1322 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 TRIM66O15016 1216 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 MFAP3LO75121 409 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 ERCC5P28715 1186 aaPredicted RBP12.66□□□□□ -0.38
PHTF2-203ENST00000307305 GTF2A1P52655 376 aaPredicted RBP12.66□□□□□ -0.38
PHTF2-203ENST00000307305 CASP8Q14790 479 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 GSDMAQ96QA5 445 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 ISCA1Q9BUE6 129 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 NDUFAB1O14561 156 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 FGFR1OPO95684 399 aaKnown RBP12.66□□□□□ -0.38
PHTF2-203ENST00000307305 CRKLP46109 303 aaKnown RBP12.66□□□□□ -0.38
PHTF2-203ENST00000307305 CFAP58Q5T655 872 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 SMCR8Q8TEV9 937 aaPredicted RBP12.66□□□□□ -0.38
PHTF2-203ENST00000307305 PYM1Q9BRP8 204 aaKnown RBP12.66□□□□□ -0.38
PHTF2-203ENST00000307305 RNF26Q9BY78 433 aaPredicted RBP12.66□□□□□ -0.38
PHTF2-203ENST00000307305 FBXO2Q9UK22 296 aaPredicted RBP12.66□□□□□ -0.38
PHTF2-203ENST00000307305 CTDP1Q9Y5B0 961 aaPredicted RBP12.66□□□□□ -0.38
PHTF2-203ENST00000307305 WTIPA6NIX2 430 aaPredicted RBP12.66□□□□□ -0.38
PHTF2-203ENST00000307305 KRT26Q7Z3Y9 468 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 REXO1L1PQ8IX06 675 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 LRRC47Q8N1G4 583 aaKnown RBP12.66□□□□□ -0.38
PHTF2-203ENST00000307305 TRIML1Q8N9V2 468 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 PKD2L1Q9P0L9 805 aa12.66□□□□□ -0.38
PHTF2-203ENST00000307305 KLRF2D3W0D1 207 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 GTPBP6O43824 516 aaPredicted RBP12.65□□□□□ -0.38
PHTF2-203ENST00000307305 PRCPP42785 496 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 PLA2G4AP47712 749 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 GNAQP50148 359 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 VAV2P52735 878 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 RPS8P62241 208 aaKnown RBP12.65□□□□□ -0.38
PHTF2-203ENST00000307305 VSNL1P62760 191 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 TTC31Q49AM3 519 aaPredicted RBP12.65□□□□□ -0.38
PHTF2-203ENST00000307305 HERC4Q5GLZ8 1057 aaPredicted RBP12.65□□□□□ -0.38
PHTF2-203ENST00000307305 USP17L2Q6R6M4 530 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 PLCD4Q9BRC7 762 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 PALLDQ8WX93 1383 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 BICDL2A1A5D9 508 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 CCDC151A5D8V7 595 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 NDUFA10O95299 355 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 LDHCP07864 332 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 CCT5P48643 541 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 ERFEQ4G0M1 354 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 MAEAQ7L5Y9 396 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 PXDNLA1KZ92 1463 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 ITSN1Q15811 1721 aa12.65□□□□□ -0.38
PHTF2-203ENST00000307305 RASSF7Q02833 373 aa12.65□□□□□ -0.39
PHTF2-203ENST00000307305 ZNF622Q969S3 477 aaKnown RBP eCLIP12.65□□□□□ -0.394e-10■□□□□ 8.7
PHTF2-203ENST00000307305 CNOT6LQ96LI5 555 aaKnown RBP12.65□□□□□ -0.39
PHTF2-203ENST00000307305 TTC26A0AVF1 554 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 RNF40O75150 1001 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 NAA15Q9BXJ9 866 aaKnown RBP12.64□□□□□ -0.39
PHTF2-203ENST00000307305 NONOQ15233 471 aaKnown RBP eCLIP12.64□□□□□ -0.39
PHTF2-203ENST00000307305 TPTE2Q6XPS3 522 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 DYDC1Q8WWB3 177 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 CTNNBL1Q8WYA6 563 aaPredicted RBP12.64□□□□□ -0.39
PHTF2-203ENST00000307305 GOLGA6L7A0A1B0GV03 622 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 ZNF185O15231 689 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 ERLIN2O94905 339 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 PTPAQ15257 358 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 NAA35Q5VZE5 725 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 FCHSD1Q86WN1 690 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 NOA1Q8NC60 698 aaKnown RBP12.64□□□□□ -0.39
PHTF2-203ENST00000307305 ZNF446Q9NWS9 450 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 SMARCAL1Q9NZC9 954 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 TUBE1Q9UJT0 475 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 CHMP2AO43633 222 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 MOCS3O95396 460 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 GNA11P29992 359 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 UHMK1Q8TAS1 419 aaKnown RBP12.64□□□□□ -0.39
PHTF2-203ENST00000307305 BCAS4Q8TDM0 211 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 MRFAP1Q9Y605 127 aa12.64□□□□□ -0.39
PHTF2-203ENST00000307305 NEURL4Q96JN8 1562 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 CEP104O60308 925 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 CD44P16070 742 aaKnown RBP12.63□□□□□ -0.39
PHTF2-203ENST00000307305 TOB1P50616 345 aaPredicted RBP12.63□□□□□ -0.39
PHTF2-203ENST00000307305 TCP10Q12799 353 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 RDH13Q8NBN7 331 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 UBLCP1Q8WVY7 318 aaPredicted RBP12.63□□□□□ -0.39
PHTF2-203ENST00000307305 BPIFA3Q9BQP9 254 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 RRP15Q9Y3B9 282 aaKnown RBP12.63□□□□□ -0.39
PHTF2-203ENST00000307305 LOC102724428A0A0B4J2F2 783 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 SIK1P57059 783 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 FAM98CQ17RN3 349 aaKnown RBP12.63□□□□□ -0.39
PHTF2-203ENST00000307305 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 OTUD6BQ8N6M0 293 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 COA7Q96BR5 231 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 C8orf37Q96NL8 207 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 FHOD1Q9Y613 1164 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 IFT172Q9UG01 1749 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 H7C1D1 291 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 WHAMMP3Q1A5X7 153 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 CCDC25Q86WR0 208 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 DIP2AQ14689 1571 aa12.63□□□□□ -0.39
PHTF2-203ENST00000307305 GNGT1P63211 74 aa12.62□□□□□ -0.39
PHTF2-203ENST00000307305 KCTD19Q17RG1 926 aaPredicted RBP12.62□□□□□ -0.39
PHTF2-203ENST00000307305 TCP11X2Q5H9J9 407 aa12.62□□□□□ -0.39
PHTF2-203ENST00000307305 CEP57Q86XR8 500 aa12.62□□□□□ -0.39
PHTF2-203ENST00000307305 STAG2Q8N3U4 1231 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms