RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 EXT2Q93063 718 aa13.9□□□□□ -0.19
USP38-201ENST00000307017 EYA1Q99502 592 aa13.9□□□□□ -0.19
USP38-201ENST00000307017 SFMBT1Q9UHJ3 866 aa13.9□□□□□ -0.19
USP38-201ENST00000307017 AMFRQ9UKV5 643 aa13.9□□□□□ -0.19
USP38-201ENST00000307017 NUB1Q9Y5A7 615 aa13.9□□□□□ -0.19
USP38-201ENST00000307017 STK10O94804 968 aaKnown RBP13.89□□□□□ -0.19
USP38-201ENST00000307017 APOEP02649 317 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 YARSP54577 528 aaKnown RBP13.89□□□□□ -0.19
USP38-201ENST00000307017 SNCBQ16143 134 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 DOK7Q18PE1 504 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 FAM47CQ5HY64 1035 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 TRMT10CQ7L0Y3 403 aaKnown RBP13.89□□□□□ -0.19
USP38-201ENST00000307017 CCDC117Q8IWD4 279 aaPredicted RBP13.89□□□□□ -0.19
USP38-201ENST00000307017 PANK4Q9NVE7 773 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 ANGEL1Q9UNK9 670 aaKnown RBP13.89□□□□□ -0.19
USP38-201ENST00000307017 USP19O94966 1318 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 SCAF11Q99590 1463 aaKnown RBP13.89□□□□□ -0.19
USP38-201ENST00000307017 FTCDO95954 541 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 ECE1P42892 770 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 PPFIA1Q13136 1202 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 WHAMMP3Q1A5X7 153 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 ACRBPQ8NEB7 543 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 AP1M1Q9BXS5 423 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 MEIS1O00470 390 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 CYP4F22Q6NT55 531 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 SLC35F6Q8N357 371 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 NUCKS1Q9H1E3 243 aaKnown RBP13.89□□□□□ -0.19
USP38-201ENST00000307017 MLXIPLQ9NP71 852 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 RTCBQ9Y3I0 505 aaKnown RBP13.89□□□□□ -0.19
USP38-201ENST00000307017 TCP10L2B9ZVM9 353 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 CLIC2O15247 247 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 ADD1P35611 737 aaKnown RBP13.89□□□□□ -0.19
USP38-201ENST00000307017 ADCY7P51828 1080 aa13.89□□□□□ -0.19
USP38-201ENST00000307017 A0A0D9SFI3 127 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 INPP1P49441 399 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 EAPPQ56P03 285 aaPredicted RBP13.88□□□□□ -0.19
USP38-201ENST00000307017 RBL2Q08999 1139 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 ZBTB22O15209 634 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 CFLARO15519 480 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 GNAT2P19087 354 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 SCYL3Q8IZE3 742 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 CARD14Q9BXL6 1004 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 CSRNP2Q9H175 543 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 POLD4Q9HCU8 107 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 PICK1Q9NRD5 415 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 CUTAO60888 179 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 ARID5BQ14865 1188 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 SPICE1Q8N0Z3 855 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 PPP4R1Q8TF05 950 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 SMCO2A6NFE2 343 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 KCNQ3O43525 872 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 GSPT1P15170 499 aaKnown RBP13.88□□□□□ -0.19
USP38-201ENST00000307017 TFAP4Q01664 338 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 ATP8A1Q9Y2Q0 1164 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 K7ENM7 598 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 RNMTO43148 476 aaKnown RBP13.88□□□□□ -0.19
USP38-201ENST00000307017 DDB1Q16531 1140 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 NBPF14Q5TI25 921 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 PPM1KQ8N3J5 372 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 EPC1Q9H2F5 836 aa13.88□□□□□ -0.19
USP38-201ENST00000307017 HIBADHP31937 336 aaKnown RBP13.87□□□□□ -0.19
USP38-201ENST00000307017 OSTNP61366 133 aa13.87□□□□□ -0.19
USP38-201ENST00000307017 DBN1Q16643 649 aa13.87□□□□□ -0.19
USP38-201ENST00000307017 SUGCTQ9HAC7 445 aa13.87□□□□□ -0.19
USP38-201ENST00000307017 GIGYF1O75420 1035 aaPredicted RBP13.87□□□□□ -0.19
USP38-201ENST00000307017 STAM2O75886 525 aa13.87□□□□□ -0.19
USP38-201ENST00000307017 MKRN3Q13064 507 aaKnown RBP13.87□□□□□ -0.19
USP38-201ENST00000307017 RYBPQ8N488 228 aaPredicted RBP13.87□□□□□ -0.19
USP38-201ENST00000307017 ARPP21Q9UBL0 812 aaPredicted RBP13.87□□□□□ -0.19
USP38-201ENST00000307017 CD2BP2O95400 341 aaKnown RBP13.87□□□□□ -0.19
USP38-201ENST00000307017 RAB3IPQ96QF0 476 aaPredicted RBP13.87□□□□□ -0.19
USP38-201ENST00000307017 PLCB1Q9NQ66 1216 aa13.87□□□□□ -0.19
USP38-201ENST00000307017 PDHA1P08559 390 aa13.87□□□□□ -0.19
USP38-201ENST00000307017 CASP14P31944 242 aa13.87□□□□□ -0.19
USP38-201ENST00000307017 ARHGAP25P42331 645 aa13.87□□□□□ -0.19
USP38-201ENST00000307017 DPP8Q6V1X1 898 aaPredicted RBP13.87□□□□□ -0.19
USP38-201ENST00000307017 RUFY4Q6ZNE9 571 aa13.87□□□□□ -0.19
USP38-201ENST00000307017 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.87□□□□□ -0.19
USP38-201ENST00000307017 PPP1R36Q96LQ0 422 aa13.87□□□□□ -0.19
USP38-201ENST00000307017 KLHL14Q9P2G3 628 aa13.87□□□□□ -0.19
USP38-201ENST00000307017 SLC1A4P43007 532 aa13.87□□□□□ -0.19
USP38-201ENST00000307017 PHEXP78562 749 aa13.87□□□□□ -0.19
USP38-201ENST00000307017 YWHAGP61981 247 aaKnown RBP eCLIP13.86□□□□□ -0.19
USP38-201ENST00000307017 C11orf57Q6ZUT1 292 aaPredicted RBP13.86□□□□□ -0.19
USP38-201ENST00000307017 PPWD1Q96BP3 646 aaKnown RBP13.86□□□□□ -0.19
USP38-201ENST00000307017 KIF14Q15058 1648 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 TROVE2P10155 538 aaKnown RBP eCLIP13.86□□□□□ -0.19
USP38-201ENST00000307017 KCNQ4P56696 695 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 ZNF710Q8N1W2 664 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 EPB41L5Q9HCM4 733 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 RRP15Q9Y3B9 282 aaKnown RBP13.86□□□□□ -0.19
USP38-201ENST00000307017 SPDYE2BA6NHP3 402 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 SPDYE6P0CI01 402 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 SLC8A3P57103 927 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 SLFNL1Q499Z3 407 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 GJA10Q969M2 543 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 RIOK1Q9BRS2 568 aaKnown RBP13.86□□□□□ -0.19
USP38-201ENST00000307017 RAB20Q9NX57 234 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 CCDC195A0A1B0GUA6 201 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 SRGAP2O75044 1071 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms