RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 FBXO46Q6PJ61 603 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 BLOC1S2Q6QNY1 142 aa12.86□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 RASGRP2Q7LDG7 609 aa12.86□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 TMTC2Q8N394 836 aa12.86□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 RAET1EQ8TD07 263 aa12.86□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 JAKMIP1Q96N16 626 aaKnown RBP12.86□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 GPCPD1Q9NPB8 672 aa12.86□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 WDR19Q8NEZ3 1342 aa12.86□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 SH2B2O14492 632 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 PEX10O60683 326 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 SLC25A27O95847 323 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 PARP1P09874 1014 aaKnown RBP12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 SNHG28P0DPA3 235 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 Q3C1V9 767 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 ADCK5Q3MIX3 580 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 SYDE2Q5VT97 1194 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 GPR142Q7Z601 462 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 NCAPG2Q86XI2 1143 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 RASEFQ8IZ41 740 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 SOCS4Q8WXH5 440 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 TEX13BQ9BXU2 312 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 USP26Q9BXU7 913 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 SRRDQ9UH36 339 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 SNX14Q9Y5W7 946 aa12.85□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 DHX16O60231 1041 aaKnown RBP12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 CASTP20810 708 aaKnown RBP12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 CTGFP29279 349 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 STAT3P40763 770 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 SLC4A3P48751 1232 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 PRKCZQ05513 592 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 TMEM132BQ14DG7 1078 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 SNRNP48Q6IEG0 339 aaKnown RBP12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 SYNE3Q6ZMZ3 975 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 DHX32Q7L7V1 743 aaKnown RBP12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 PLEKHH3Q7Z736 793 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 CPXCR1Q8N123 301 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 SHCBP1Q8NEM2 672 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 IGDCC4Q8TDY8 1250 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 NUP133Q8WUM0 1156 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 KCNB2Q92953 911 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 NUDT12Q9BQG2 462 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 MOV10L1Q9BXT6 1211 aaKnown RBP12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 LRRC2Q9BYS8 371 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 PORCNQ9H237 461 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 MROH8Q9H579 483 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 LY9Q9HBG7 655 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 SLC38A10Q9HBR0 1119 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 PRR12Q9ULL5 1215 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 ADAMTS5Q9UNA0 930 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 PTPN22Q9Y2R2 807 aa12.84□□□□□ -0.35
CSPG4P1Y-201ENST00000306641 DDAH1O94760 285 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 GOLGA8HP0CJ92 632 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CALM1P0DP23 149 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CALM2P0DP24 149 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CALM3P0DP25 149 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ERCC3P19447 782 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 SLC16A2P36021 539 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 LIFRP42702 1097 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 OAZ1P54368 228 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CAP1Q01518 475 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 TTBK2Q6IQ55 1244 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CCDC174Q6PII3 467 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 BTNL9Q6UXG8 535 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 RIOX2Q8IUF8 465 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ZNF654Q8IZM8 581 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 REPS2Q8NFH8 660 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CTCFLQ8NI51 663 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 RAVER2Q9HCJ3 691 aaKnown RBP12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ZNF214Q9UL59 606 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 PTCH2Q9Y6C5 1203 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 SMCHD1A6NHR9 2005 aa12.83□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 BAZ2BQ9UIF8 2168 aaKnown RBP12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ATP2A1O14983 1001 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 KIF5BP33176 963 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 RGS2P41220 211 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 FLT3LGP49771 235 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 GRM4Q14833 912 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 C8orf34Q49A92 452 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 SLC9C1Q4G0N8 1177 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 NBPF11Q86T75 865 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 TCEANC2Q96MN5 208 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 RANBP17Q9H2T7 1088 aaKnown RBP12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 PNMA2Q9UL42 364 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 GABRQQ9UN88 632 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 SLC12A7Q9Y666 1083 aa12.82□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 SLC15A5A6NIM6 579 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 FCER1AP12319 257 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 RPS6KB1P23443 525 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ANAPC15P60006 121 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 TKFCQ3LXA3 575 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 MICU3Q86XE3 530 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 MMP19Q99542 508 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 MAP3K14Q99558 947 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 APBA2Q99767 749 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 UBA5Q9GZZ9 404 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 UPF2Q9HAU5 1272 aaKnown RBP12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 SENP2Q9HC62 589 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 SLC5A4Q9NY91 659 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms