RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 EIF3HO15372 352 aaKnown RBP eCLIP14.52□□□□□ -0.09
TRIM35-201ENST00000305364 PHKG2P15735 406 aa14.52□□□□□ -0.09
TRIM35-201ENST00000305364 LIFRP42702 1097 aa14.52□□□□□ -0.09
TRIM35-201ENST00000305364 E2F5Q15329 346 aa14.52□□□□□ -0.09
TRIM35-201ENST00000305364 TUBGCP2Q9BSJ2 902 aa14.52□□□□□ -0.09
TRIM35-201ENST00000305364 RTL9Q8NET4 1388 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 KAT6BQ8WYB5 2073 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 PTPRUQ92729 1446 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 BICDL2A1A5D9 508 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 FAM205CA6NFA0 338 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 SPATS2Q86XZ4 545 aaKnown RBP14.51□□□□□ -0.09
TRIM35-201ENST00000305364 ODF2LQ9ULJ1 636 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 RPS6KA5O75582 802 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 CIAO1O76071 339 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 MOCS3O95396 460 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 FOXO4P98177 505 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 MB21D1Q8N884 522 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 UBLCP1Q8WVY7 318 aaPredicted RBP14.51□□□□□ -0.09
TRIM35-201ENST00000305364 A0A1B0GUA9 196 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 TARSL2A2RTX5 802 aaKnown RBP14.51□□□□□ -0.09
TRIM35-201ENST00000305364 MYO1FO00160 1098 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 NEDD9Q14511 834 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 CCDC40Q4G0X9 1142 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 NOX5Q96PH1 765 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 PLCD4Q9BRC7 762 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 LRRC1Q9BTT6 524 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 EPB41L5Q9HCM4 733 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 CPDO75976 1380 aa14.51□□□□□ -0.09
TRIM35-201ENST00000305364 SF3B2Q13435 895 aaKnown RBP14.5□□□□□ -0.09
TRIM35-201ENST00000305364 ZNF658Q5TYW1 1059 aaPredicted RBP14.5□□□□□ -0.09
TRIM35-201ENST00000305364 RRAGAQ7L523 313 aa14.5□□□□□ -0.09
TRIM35-201ENST00000305364 ORAI2Q96SN7 254 aa14.5□□□□□ -0.09
TRIM35-201ENST00000305364 VEZTQ9HBM0 779 aa14.5□□□□□ -0.09
TRIM35-201ENST00000305364 NEBLO76041 1014 aa14.5□□□□□ -0.09
TRIM35-201ENST00000305364 MCAMP43121 646 aa14.5□□□□□ -0.09
TRIM35-201ENST00000305364 ACTN3Q08043 901 aaPredicted RBP14.5□□□□□ -0.09
TRIM35-201ENST00000305364 SMCR8Q8TEV9 937 aaPredicted RBP14.5□□□□□ -0.09
TRIM35-201ENST00000305364 N4BP2L2Q92802 583 aaPredicted RBP14.5□□□□□ -0.09
TRIM35-201ENST00000305364 FGFR1OPO95684 399 aaKnown RBP14.5□□□□□ -0.09
TRIM35-201ENST00000305364 SYF2O95926 243 aaKnown RBP14.5□□□□□ -0.09
TRIM35-201ENST00000305364 PHKA1P46020 1223 aa14.5□□□□□ -0.09
TRIM35-201ENST00000305364 SPATA31D1Q6ZQQ2 1576 aa14.5□□□□□ -0.09
TRIM35-201ENST00000305364 WDR19Q8NEZ3 1342 aa14.5□□□□□ -0.09
TRIM35-201ENST00000305364 GCOM1H8Y6P7 765 aaPredicted RBP14.49□□□□□ -0.09
TRIM35-201ENST00000305364 MYZAPP0CAP1 466 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 TOB1P50616 345 aaPredicted RBP14.49□□□□□ -0.09
TRIM35-201ENST00000305364 UBE3CQ15386 1083 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 RPAINQ86UA6 219 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 FNBP4Q8N3X1 1017 aaPredicted RBP14.49□□□□□ -0.09
TRIM35-201ENST00000305364 STIM2Q9P246 746 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 BAIAP2L1Q9UHR4 511 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 NFU1Q9UMS0 254 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 TNKSO95271 1327 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 PRKAB2O43741 272 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 STARD3NLO95772 234 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 NR1D1P20393 614 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 TNNC1P63316 161 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 AMPD3Q01432 767 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 GUCY1A3Q02108 690 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 ALS2CLQ60I27 953 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 TRAPPC11Q7Z392 1133 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 JCADQ9P266 1359 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 CHUKO15111 745 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 HEXIM1O94992 359 aaKnown RBP14.49□□□□□ -0.09
TRIM35-201ENST00000305364 PRCPP42785 496 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 PIH1D3Q9NQM4 214 aaKnown RBP14.49□□□□□ -0.09
TRIM35-201ENST00000305364 ESYT3A0FGR9 886 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 TSPY2A6NKD2 308 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 GNAT2P19087 354 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 EMBQ6PCB8 327 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 DYDC1Q8WWB3 177 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 TSG101Q99816 390 aa14.49□□□□□ -0.09
TRIM35-201ENST00000305364 PSMD14O00487 310 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 RPSAP08865 295 aaKnown RBP14.48□□□□□ -0.09
TRIM35-201ENST00000305364 KRT26Q7Z3Y9 468 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 TEX2Q8IWB9 1127 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 IGDCC4Q8TDY8 1250 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 ITIH6Q6UXX5 1313 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 TLDC2A0PJX2 215 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 MEFVO15553 781 aaPredicted RBP14.48□□□□□ -0.09
TRIM35-201ENST00000305364 EEF1GP26641 437 aaKnown RBP14.48□□□□□ -0.09
TRIM35-201ENST00000305364 MDM2Q00987 491 aaPredicted RBP14.48□□□□□ -0.09
TRIM35-201ENST00000305364 PRPF4BQ13523 1007 aaKnown RBP14.48□□□□□ -0.09
TRIM35-201ENST00000305364 PNMA8AQ86V59 439 aaPredicted RBP14.48□□□□□ -0.09
TRIM35-201ENST00000305364 CABLES1Q8TDN4 633 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.48□□□□□ -0.09
TRIM35-201ENST00000305364 RRP36Q96EU6 259 aaKnown RBP14.48□□□□□ -0.09
TRIM35-201ENST00000305364 NLRC4Q9NPP4 1024 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 LIMA1Q9UHB6 759 aaKnown RBP14.48□□□□□ -0.09
TRIM35-201ENST00000305364 CEP83Q9Y592 693 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 SMIM23A6NLE4 172 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 KRT14P02533 472 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 FAM212AQ96EL1 285 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 CALML4Q96GE6 196 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 MLXIPQ9HAP2 919 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 ATG3Q9NT62 314 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 STK36Q9NRP7 1315 aa14.48□□□□□ -0.09
TRIM35-201ENST00000305364 ANO9A1A5B4 782 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 LGALS16A8MUM7 142 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 PPP1R3GB7ZBB8 358 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms