RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CCNA1P78396 465 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 ATP2B2Q01814 1243 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 PTH1RQ03431 593 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 COL9A3Q14050 684 aaPredicted RBP13.35□□□□□ -0.27
CLCC1-201ENST00000302500 OLFML2BQ68BL8 750 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 BTNL9Q6UXG8 535 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 MROH8Q9H579 483 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 OGDHLQ9ULD0 1010 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 SLC3A2P08195 630 aaKnown RBP13.34□□□□□ -0.27
CLCC1-201ENST00000302500 CYBAP13498 195 aa13.34□□□□□ -0.27
CLCC1-201ENST00000302500 PRKAR2AP13861 404 aaKnown RBP13.34□□□□□ -0.27
CLCC1-201ENST00000302500 CCND3P30281 292 aaPredicted RBP13.34□□□□□ -0.27
CLCC1-201ENST00000302500 ZNF792Q3KQV3 632 aa13.34□□□□□ -0.27
CLCC1-201ENST00000302500 SLFN13Q68D06 897 aa13.34□□□□□ -0.27
CLCC1-201ENST00000302500 PRPF38AQ8NAV1 312 aaKnown RBP13.34□□□□□ -0.27
CLCC1-201ENST00000302500 TMEM47Q9BQJ4 181 aa13.34□□□□□ -0.27
CLCC1-201ENST00000302500 ASTN1O14525 1302 aa13.33□□□□□ -0.27
CLCC1-201ENST00000302500 TSPY2A6NKD2 308 aa13.33□□□□□ -0.28
CLCC1-201ENST00000302500 COL6A1P12109 1028 aa13.33□□□□□ -0.28
CLCC1-201ENST00000302500 BMP3P12645 472 aa13.33□□□□□ -0.28
CLCC1-201ENST00000302500 STAT3P40763 770 aa13.33□□□□□ -0.28
CLCC1-201ENST00000302500 NT5C2P49902 561 aa13.33□□□□□ -0.28
CLCC1-201ENST00000302500 OAZ1P54368 228 aa13.33□□□□□ -0.28
CLCC1-201ENST00000302500 TRMT44Q8IYL2 757 aaKnown RBP13.33□□□□□ -0.28
CLCC1-201ENST00000302500 MAML3Q96JK9 1138 aa13.33□□□□□ -0.28
CLCC1-201ENST00000302500 DEFB118Q96PH6 123 aa13.33□□□□□ -0.28
CLCC1-201ENST00000302500 DIAPH3Q9NSV4 1193 aa13.33□□□□□ -0.28
CLCC1-201ENST00000302500 FEM1BQ9UK73 627 aa13.33□□□□□ -0.28
CLCC1-201ENST00000302500 RANBP6O60518 1105 aaKnown RBP13.32□□□□□ -0.28
CLCC1-201ENST00000302500 SLC25A27O95847 323 aa13.32□□□□□ -0.28
CLCC1-201ENST00000302500 CYP21A2P08686 494 aa13.32□□□□□ -0.28
CLCC1-201ENST00000302500 PDHBP11177 359 aa13.32□□□□□ -0.28
CLCC1-201ENST00000302500 CAPN2P17655 700 aa13.32□□□□□ -0.28
CLCC1-201ENST00000302500 MFAP1P55081 439 aaKnown RBP13.32□□□□□ -0.28
CLCC1-201ENST00000302500 SEC23AQ15436 765 aa13.32□□□□□ -0.28
CLCC1-201ENST00000302500 STOX1Q6ZVD7 989 aa13.32□□□□□ -0.28
CLCC1-201ENST00000302500 CENPQQ7L2Z9 268 aaPredicted RBP13.32□□□□□ -0.28
CLCC1-201ENST00000302500 DIS3LQ8TF46 1054 aaKnown RBP13.32□□□□□ -0.28
CLCC1-201ENST00000302500 MAP4K1Q92918 833 aa13.32□□□□□ -0.28
CLCC1-201ENST00000302500 TTC14Q96N46 770 aa13.32□□□□□ -0.28
CLCC1-201ENST00000302500 TEX13BQ9BXU2 312 aa13.32□□□□□ -0.28
CLCC1-201ENST00000302500 PFASO15067 1338 aa13.32□□□□□ -0.28
CLCC1-201ENST00000302500 TOP1P11387 765 aaKnown RBP13.31□□□□□ -0.28
CLCC1-201ENST00000302500 ZKSCAN1P17029 563 aaPredicted RBP13.31□□□□□ -0.28
CLCC1-201ENST00000302500 MCCP23508 829 aa13.31□□□□□ -0.28
CLCC1-201ENST00000302500 CYP2C19P33261 490 aa13.31□□□□□ -0.28
CLCC1-201ENST00000302500 PRPF38BQ5VTL8 546 aaKnown RBP13.31□□□□□ -0.28
CLCC1-201ENST00000302500 ANKLE1Q8NAG6 615 aa13.31□□□□□ -0.28
CLCC1-201ENST00000302500 KATNBL1Q9H079 304 aa13.31□□□□□ -0.28
CLCC1-201ENST00000302500 RANBP17Q9H2T7 1088 aaKnown RBP13.31□□□□□ -0.28
CLCC1-201ENST00000302500 PRO3102Q9H379 93 aa13.31□□□□□ -0.28
CLCC1-201ENST00000302500 HMX1Q9NP08 348 aaPredicted RBP13.31□□□□□ -0.28
CLCC1-201ENST00000302500 ZSWIM5Q9P217 1185 aa13.31□□□□□ -0.28
CLCC1-201ENST00000302500 PRR12Q9ULL5 1215 aa13.31□□□□□ -0.28
CLCC1-201ENST00000302500 STX8Q9UNK0 236 aa13.31□□□□□ -0.28
CLCC1-201ENST00000302500 DIS3Q9Y2L1 958 aaKnown RBP13.31□□□□□ -0.28
CLCC1-201ENST00000302500 TMEM232C9JQI7 657 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 ZNF213O14771 459 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 STAT2P52630 851 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 SLC35G1Q2M3R5 365 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 BMP2KLQ5H9B9 411 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 TTBK2Q6IQ55 1244 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 MAMDC4Q6UXC1 1216 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 MFSD6Q6ZSS7 791 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 KCTD1Q719H9 257 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 CYB5R4Q7L1T6 521 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 NCAPG2Q86XI2 1143 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 DGKHQ86XP1 1220 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 ENAHQ8N8S7 591 aaPredicted RBP13.3□□□□□ -0.28
CLCC1-201ENST00000302500 DCAF4Q8WV16 495 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 LSG1Q9H089 658 aaKnown RBP13.3□□□□□ -0.28
CLCC1-201ENST00000302500 MYH6P13533 1939 aa13.3□□□□□ -0.28
CLCC1-201ENST00000302500 B4E1Z4 1266 aa13.29□□□□□ -0.28
CLCC1-201ENST00000302500 KDM4AO75164 1064 aa13.29□□□□□ -0.28
CLCC1-201ENST00000302500 PGK2P07205 417 aa13.29□□□□□ -0.28
CLCC1-201ENST00000302500 TAL1P17542 331 aaPredicted RBP13.29□□□□□ -0.28
CLCC1-201ENST00000302500 SLC1A4P43007 532 aa13.29□□□□□ -0.28
CLCC1-201ENST00000302500 ZNF543Q08ER8 600 aa13.29□□□□□ -0.28
CLCC1-201ENST00000302500 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
CLCC1-201ENST00000302500 SNRNP48Q6IEG0 339 aaKnown RBP13.29□□□□□ -0.28
CLCC1-201ENST00000302500 FAM160B2Q86V87 743 aa13.29□□□□□ -0.28
CLCC1-201ENST00000302500 KIFC2Q96AC6 838 aa13.29□□□□□ -0.28
CLCC1-201ENST00000302500 RNF41Q9H4P4 317 aaPredicted RBP13.29□□□□□ -0.28
CLCC1-201ENST00000302500 RAVER2Q9HCJ3 691 aaKnown RBP13.29□□□□□ -0.28
CLCC1-201ENST00000302500 BIN2Q9UBW5 565 aaPredicted RBP13.29□□□□□ -0.28
CLCC1-201ENST00000302500 TRIOBPQ9H2D6 2365 aa13.29□□□□□ -0.28
CLCC1-201ENST00000302500 CDH23Q9H251 3354 aa13.28□□□□□ -0.28
CLCC1-201ENST00000302500 ADCY6O43306 1168 aa13.28□□□□□ -0.28
CLCC1-201ENST00000302500 FARP2O94887 1054 aaPredicted RBP13.28□□□□□ -0.28
CLCC1-201ENST00000302500 ZNF865P0CJ78 1059 aaPredicted RBP13.28□□□□□ -0.28
CLCC1-201ENST00000302500 FDX1P10109 184 aa13.28□□□□□ -0.28
CLCC1-201ENST00000302500 FCER1AP12319 257 aa13.28□□□□□ -0.28
CLCC1-201ENST00000302500 COPB2P35606 906 aa13.28□□□□□ -0.28
CLCC1-201ENST00000302500 ANTXR2P58335 489 aa13.28□□□□□ -0.28
CLCC1-201ENST00000302500 ZNF467Q7Z7K2 595 aaPredicted RBP13.28□□□□□ -0.28
CLCC1-201ENST00000302500 FAM133AQ8N9E0 248 aa13.28□□□□□ -0.28
CLCC1-201ENST00000302500 ESR2Q92731 530 aa13.28□□□□□ -0.28
CLCC1-201ENST00000302500 AGBL1Q96MI9 1066 aa13.28□□□□□ -0.28
CLCC1-201ENST00000302500 ZKSCAN3Q9BRR0 538 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms