RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 NCOA5Q9HCD5 579 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 SLURP2P0DP57 97 aa9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 ZBTB48P10074 688 aaPredicted RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 SLC1A4P43007 532 aa9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 PFKFB3Q16875 520 aaPredicted RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 GALNT17Q6IS24 598 aa9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 SRBD1Q8N5C6 995 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 ZKSCAN4Q969J2 545 aaPredicted RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 LARP6Q9BRS8 491 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 WDR33Q9C0J8 1336 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 KLRF2D3W0D1 207 aa9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 FDPSP14324 419 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 RRP36Q96EU6 259 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 SCAF8Q9UPN6 1271 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 PLEKHA8P1O95397 391 aa9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 XBP1P17861 261 aa9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 ADD1P35611 737 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 PRAMEF18Q5VWM3 479 aa9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 CHURC1Q8WUH1 139 aa9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 PCMTD1Q96MG8 357 aaPredicted RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 GTF3C2Q8WUA4 911 aaPredicted RBP9.71□□□□□ -0.85
PTPDC1-201ENST00000288976 CCDC12Q8WUD4 166 aaPredicted RBP9.71□□□□□ -0.85
PTPDC1-201ENST00000288976 TMOD4Q9NZQ9 345 aa9.71□□□□□ -0.85
PTPDC1-201ENST00000288976 ECE1P42892 770 aa9.71□□□□□ -0.85
PTPDC1-201ENST00000288976 STAT2P52630 851 aa9.71□□□□□ -0.85
PTPDC1-201ENST00000288976 ZFYVE27Q5T4F4 411 aa9.71□□□□□ -0.85
PTPDC1-201ENST00000288976 SYDE2Q5VT97 1194 aa9.71□□□□□ -0.85
PTPDC1-201ENST00000288976 CLEC10AQ8IUN9 316 aa9.71□□□□□ -0.85
PTPDC1-201ENST00000288976 DAGLBQ8NCG7 672 aa9.71□□□□□ -0.85
PTPDC1-201ENST00000288976 ACER1Q8TDN7 264 aa9.71□□□□□ -0.85
PTPDC1-201ENST00000288976 RANBP17Q9H2T7 1088 aaKnown RBP9.71□□□□□ -0.85
PTPDC1-201ENST00000288976 ZNF408Q9H9D4 720 aa9.71□□□□□ -0.85
PTPDC1-201ENST00000288976 ORC3Q9UBD5 711 aaPredicted RBP9.71□□□□□ -0.85
PTPDC1-201ENST00000288976 VPS37CA5D8V6 355 aaPredicted RBP9.71□□□□□ -0.86
PTPDC1-201ENST00000288976 CELF2O95319 508 aaKnown RBP9.71□□□□□ -0.86
PTPDC1-201ENST00000288976 RXRAP19793 462 aa9.71□□□□□ -0.86
PTPDC1-201ENST00000288976 MTMR2Q13614 643 aa9.71□□□□□ -0.86
PTPDC1-201ENST00000288976 CCDC96Q2M329 555 aa9.71□□□□□ -0.86
PTPDC1-201ENST00000288976 STAG2Q8N3U4 1231 aa9.71□□□□□ -0.86
PTPDC1-201ENST00000288976 CCDC148Q8NFR7 591 aa9.71□□□□□ -0.86
PTPDC1-201ENST00000288976 FEZ1Q99689 392 aa9.71□□□□□ -0.86
PTPDC1-201ENST00000288976 EMILIN3Q9NT22 766 aa9.71□□□□□ -0.86
PTPDC1-201ENST00000288976 SEC63Q9UGP8 760 aaKnown RBP9.71□□□□□ -0.86
PTPDC1-201ENST00000288976 PNMA6FA0A0J9YX94 578 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 ESYT2A0FGR8 921 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 JAK2O60674 1132 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 TOMM70O94826 608 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 SCG2P13521 617 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 PKN1Q16512 942 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 ARID3AQ99856 593 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 SLC26A6Q9BXS9 759 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 GLT8D2Q9H1C3 349 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 ZCCHC17Q9NP64 241 aaKnown RBP9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 TLL2Q9Y6L7 1015 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 ZHX2Q9Y6X8 837 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 TRAF5O00463 557 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 BRD1O95696 1058 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 HOXA7P31268 230 aaPredicted RBP9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 OAZ1P54368 228 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 LBX2Q6XYB7 198 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 FASTKD5Q7L8L6 764 aaKnown RBP9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 CCDC144CPQ8IYA2 1237 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 SAMD3Q8N6K7 520 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 STX6O43752 255 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 VCAM1P19320 739 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 CLEC17AQ6ZS10 378 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 WNK4Q96J92 1243 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 SLF1Q9BQI6 1058 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 A0A0U1RQG5 324 aaPredicted RBP9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 ZBTB5O15062 677 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 PABPC4Q13310 644 aaKnown RBP eCLIP9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 MCTP2Q6DN12 878 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 ADGRF4Q8IZF3 695 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 ELP3Q9H9T3 547 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 JMJD4Q9H9V9 463 aa9.7□□□□□ -0.86
PTPDC1-201ENST00000288976 IRF6O14896 467 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 GTF2A2P52657 109 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 SNAPC2Q13487 334 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 ALG1Q9BT22 464 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 ZSCAN16Q9H4T2 348 aaPredicted RBP9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 BARHL2Q9NY43 387 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 FRMPD2Q68DX3 1309 aaPredicted RBP9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 TESPA1A2RU30 521 aaPredicted RBP9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 USP17L15C9J2P7 530 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 USP17L13C9JLJ4 530 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 USP17L11C9JVI0 530 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 USP17L18D6R9N7 530 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 USP17L22D6RA61 530 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 USP17L17D6RBQ6 530 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 USP17L19D6RCP7 530 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 USP17L20D6RJB6 530 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 CYTH3O43739 400 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 SYT1P21579 422 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 USP17L24Q0WX57 530 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 SLC35G1Q2M3R5 365 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 KIAA1755Q5JYT7 1200 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 FAM83BQ5T0W9 1011 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 LARP1BQ659C4 914 aaKnown RBP9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 TMEM87AQ8NBN3 555 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 OPTNQ96CV9 577 aa9.69□□□□□ -0.86
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