RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 SEPT12Q8IYM1 358 aa14.68□□□□□ -0.06
SMG9-201ENST00000270066 PIGBQ92521 554 aa14.68□□□□□ -0.06
SMG9-201ENST00000270066 MAP4K1Q92918 833 aa14.68□□□□□ -0.06
SMG9-201ENST00000270066 IQGAP3Q86VI3 1631 aa14.68□□□□□ -0.06
SMG9-201ENST00000270066 TTLL1O95922 423 aa14.68□□□□□ -0.06
SMG9-201ENST00000270066 ADD1P35611 737 aaKnown RBP14.68□□□□□ -0.06
SMG9-201ENST00000270066 MAGEA1P43355 309 aa14.68□□□□□ -0.06
SMG9-201ENST00000270066 ZBTB16Q05516 673 aa14.68□□□□□ -0.06
SMG9-201ENST00000270066 PNOCQ13519 176 aa14.68□□□□□ -0.06
SMG9-201ENST00000270066 METTL13Q8N6R0 699 aa14.68□□□□□ -0.06
SMG9-201ENST00000270066 OSBPL3Q9H4L5 887 aa14.68□□□□□ -0.06
SMG9-201ENST00000270066 NPR1P16066 1061 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 SMC6Q96SB8 1091 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 SEC31BQ9NQW1 1179 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 NRBP2Q9NSY0 501 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 UTP11Q9Y3A2 253 aaKnown RBP14.67□□□□□ -0.06
SMG9-201ENST00000270066 ARHGAP6O43182 974 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 LONP1P36776 959 aaKnown RBP14.67□□□□□ -0.06
SMG9-201ENST00000270066 LIG4P49917 911 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 C8orf74Q6P047 294 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 CCDC125Q86Z20 511 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 UBLCP1Q8WVY7 318 aaPredicted RBP14.67□□□□□ -0.06
SMG9-201ENST00000270066 GPKOWQ92917 476 aaPredicted RBP eCLIP14.67□□□□□ -0.06
SMG9-201ENST00000270066 LSG1Q9H089 658 aaKnown RBP14.67□□□□□ -0.06
SMG9-201ENST00000270066 hCG_1984214I3L0E3 225 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 GADD45BO75293 160 aaPredicted RBP14.67□□□□□ -0.06
SMG9-201ENST00000270066 ZNF853P0CG23 659 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 OSBPP22059 807 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 ADD2P35612 726 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 ZNF713Q8N859 430 aaPredicted RBP14.67□□□□□ -0.06
SMG9-201ENST00000270066 TRIML1Q8N9V2 468 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 CCDC51Q96ER9 411 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 NACA2Q9H009 215 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 DHX36Q9H2U1 1008 aaKnown RBP14.67□□□□□ -0.06
SMG9-201ENST00000270066 MAGEF1Q9HAY2 307 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 PCDHA1Q9Y5I3 950 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 LAD1O00515 517 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 XRCC5P13010 732 aaKnown RBP14.67□□□□□ -0.06
SMG9-201ENST00000270066 PDIA3P30101 505 aaKnown RBP14.67□□□□□ -0.06
SMG9-201ENST00000270066 GRAPQ13588 217 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 GRAPLQ8TC17 118 aaPredicted RBP14.67□□□□□ -0.06
SMG9-201ENST00000270066 TLDC2A0PJX2 215 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 SMIM23A6NLE4 172 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 ADPGKQ9BRR6 497 aa14.67□□□□□ -0.06
SMG9-201ENST00000270066 ARHGEF6Q15052 776 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 CLEC4GQ6UXB4 293 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 GBP6Q6ZN66 633 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 CCDC121Q6ZUS5 278 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 MAIP1Q8WWC4 291 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 STAMQ92783 540 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 PANK4Q9NVE7 773 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 COL4A3BPQ9Y5P4 624 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 CMA1P23946 247 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 KCTD2Q14681 263 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 HDXQ7Z353 690 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 NSMCE1Q8WV22 266 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 KCNK9Q9NPC2 374 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 ATF7P17544 494 aaPredicted RBP14.66□□□□□ -0.06
SMG9-201ENST00000270066 POLA2Q14181 598 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 RASA3Q14644 834 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 FAM47CQ5HY64 1035 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 PROCA1Q8NCQ7 364 aaPredicted RBP14.66□□□□□ -0.06
SMG9-201ENST00000270066 LMBRD1Q9NUN5 540 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 ODF2LQ9ULJ1 636 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 K7ENM7 598 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 GTPBP6O43824 516 aaPredicted RBP14.66□□□□□ -0.06
SMG9-201ENST00000270066 NR1I2O75469 434 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 TNNC2P02585 160 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 SPOUT1Q5T280 376 aaKnown RBP14.66□□□□□ -0.06
SMG9-201ENST00000270066 KANSL2Q9H9L4 492 aa14.66□□□□□ -0.06
SMG9-201ENST00000270066 CLRN2A0PK11 232 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 PALM3A6NDB9 673 aaPredicted RBP14.65□□□□□ -0.06
SMG9-201ENST00000270066 TMOD1P28289 359 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 RTKN2Q8IZC4 609 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 RNF26Q9BY78 433 aaPredicted RBP14.65□□□□□ -0.06
SMG9-201ENST00000270066 PRAMEF22A3QJZ6 481 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 M0R2C6 588 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 TRAPPC10P48553 1259 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 SLC17A8Q8NDX2 589 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 KIAA1468Q9P260 1216 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 DTNBO60941 627 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 LSM14BQ9BX40 385 aaKnown RBP14.65□□□□□ -0.06
SMG9-201ENST00000270066 DBNDD1Q9H9R9 158 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 TLR7Q9NYK1 1049 aaKnown RBP14.65□□□□□ -0.06
SMG9-201ENST00000270066 NT5C2P49902 561 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 CYP2J2P51589 502 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 CFAP157Q5JU67 520 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 RABEP2Q9H5N1 569 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 NKIRAS1Q9NYS0 192 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 LARSQ9P2J5 1176 aaKnown RBP14.65□□□□□ -0.06
SMG9-201ENST00000270066 PALD1Q9ULE6 856 aa14.65□□□□□ -0.06
SMG9-201ENST00000270066 DMP1Q13316 513 aaPredicted RBP14.64□□□□□ -0.07
SMG9-201ENST00000270066 USP28Q96RU2 1077 aa14.64□□□□□ -0.07
SMG9-201ENST00000270066 FMNL1O95466 1100 aaPredicted RBP14.64□□□□□ -0.07
SMG9-201ENST00000270066 YARSP54577 528 aaKnown RBP14.64□□□□□ -0.07
SMG9-201ENST00000270066 UTP14CQ5TAP6 766 aaKnown RBP14.64□□□□□ -0.07
SMG9-201ENST00000270066 FAM178BQ8IXR5 827 aa14.64□□□□□ -0.07
SMG9-201ENST00000270066 TRIM7Q9C029 511 aa14.64□□□□□ -0.07
SMG9-201ENST00000270066 BSDC1Q9NW68 430 aaPredicted RBP14.64□□□□□ -0.07
SMG9-201ENST00000270066 USTQ9Y2C2 406 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms