RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 NHSQ6T4R5 1651 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 VWA3AA6NCI4 1184 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 POTEB2H3BUK9 544 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 WDR46O15213 610 aaKnown RBP9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 TXKP42681 527 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 MTMR2Q13614 643 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 COA7Q96BR5 231 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 NUP88Q99567 741 aaPredicted RBP9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 VCPKMTQ9H867 229 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 GBA2Q9HCG7 927 aaPredicted RBP9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 STK24Q9Y6E0 443 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 YDJCA8MPS7 323 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 UBE2Q2LH0YL09 131 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 NOP56O00567 594 aaKnown RBP9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 SOCS7O14512 581 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 ZBTB5O15062 677 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 MYSM1Q5VVJ2 828 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 NEK8Q86SG6 692 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 PCDHA4Q9UN74 947 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 AFDNP55196 1824 aaKnown RBP9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 NDUFB10O96000 172 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 PDE4DQ08499 809 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 CALCRLQ16602 461 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 FAM173BQ6P4H8 233 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 SMARCE1Q969G3 411 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 RPAP3Q9H6T3 665 aaPredicted RBP9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 ANO10Q9NW15 660 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 LTBP3Q9NS15 1303 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 TESPA1A2RU30 521 aaPredicted RBP9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 HAUS3Q68CZ6 603 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 IGDCC4Q8TDY8 1250 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 ZC3H15Q8WU90 426 aaKnown RBP9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 LARGE1O95461 756 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 RHBDL3P58872 404 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 COG2Q14746 738 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 INF2Q27J81 1249 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 IQUBQ8NA54 791 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 TSG101Q99816 390 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 GLIS2Q9BZE0 524 aaPredicted RBP9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 THSD7AQ9UPZ6 1657 aa9.37□□□□□ -0.91
GTF3C3-201ENST00000263956 NEMFO60524 1076 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 CD2BP2O95400 341 aaKnown RBP9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 BRD1O95696 1058 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 ERO1BQ86YB8 467 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 FERMT2Q96AC1 680 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 FOXP1Q9H334 677 aaPredicted RBP9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 SPC25Q9HBM1 224 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 DDX4Q9NQI0 724 aaKnown RBP9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 MTMR6Q9Y217 621 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 LAMB4A4D0S4 1761 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 ITGB4P16144 1822 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 SMTNL1A8MU46 457 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 CHMP2AO43633 222 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 CCT6AP40227 531 aaKnown RBP9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 ZNF543Q08ER8 600 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 CLEC10AQ8IUN9 316 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 DHX58Q96C10 678 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 LRWD1Q9UFC0 647 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 RABGAP1Q9Y3P9 1069 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 C10orf71Q711Q0 1435 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 CUTAO60888 179 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 YEATS4O95619 227 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 CETPP11597 493 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 COPB2P35606 906 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 ZKSCAN4Q969J2 545 aaPredicted RBP9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 SH3GLB2Q9NR46 395 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 RMND1Q9NWS8 449 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 ZNF541Q9H0D2 1346 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 ADM5C9JUS6 153 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 GAS7O60861 476 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 NPM3O75607 178 aaKnown RBP9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 MSNP26038 577 aaKnown RBP9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 SNAP25P60880 206 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 PRR16Q569H4 304 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 PLA2G4DQ86XP0 818 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 CPVLQ9H3G5 476 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 RAVER2Q9HCJ3 691 aaKnown RBP9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 STK36Q9NRP7 1315 aa9.36□□□□□ -0.91
GTF3C3-201ENST00000263956 C5P01031 1676 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 AFMP43652 599 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 TRAPPC10P48553 1259 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 NCAPH2Q6IBW4 605 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 SNRNP48Q6IEG0 339 aaKnown RBP9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 AZI2Q9H6S1 392 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 EXOC1Q9NV70 894 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 ABCB11O95342 1321 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 IPO7O95373 1038 aaKnown RBP9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 FGFR1OPO95684 399 aaKnown RBP9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 INPP5BP32019 993 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 ANTXR2P58335 489 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 PFKFB3Q16875 520 aaPredicted RBP9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 KLHL10Q6JEL2 608 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 CCDC84Q86UT8 332 aaPredicted RBP9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 MLXIPQ9HAP2 919 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 FAM198AQ9UFP1 575 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 CCL15-CCL14A0A0B4J2E2 113 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 DDX39AO00148 427 aaKnown RBP9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 MMP1P03956 469 aa9.35□□□□□ -0.91
GTF3C3-201ENST00000263956 LIG1P18858 919 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms