RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 TTBK2Q6IQ55 1244 aa18.08■□□□□ 0.48
VPS26A-201ENST00000263559 FAM177A1Q8N128 213 aaPredicted RBP18.08■□□□□ 0.48
VPS26A-201ENST00000263559 DNAJC25Q9H1X3 360 aa18.08■□□□□ 0.48
VPS26A-201ENST00000263559 VEZTQ9HBM0 779 aa18.08■□□□□ 0.48
VPS26A-201ENST00000263559 KCTD1Q719H9 257 aa18.07■□□□□ 0.48
VPS26A-201ENST00000263559 CSRNP2Q9H175 543 aa18.07■□□□□ 0.48
VPS26A-201ENST00000263559 A0A087WWV3 80 aa18.07■□□□□ 0.48
VPS26A-201ENST00000263559 SHTN1A0MZ66 631 aa18.07■□□□□ 0.48
VPS26A-201ENST00000263559 BMP15O95972 392 aa18.07■□□□□ 0.48
VPS26A-201ENST00000263559 CCDC96Q2M329 555 aa18.07■□□□□ 0.48
VPS26A-201ENST00000263559 CCDC12Q8WUD4 166 aaPredicted RBP18.07■□□□□ 0.48
VPS26A-201ENST00000263559 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.07■□□□□ 0.48
VPS26A-201ENST00000263559 CBX8Q9HC52 389 aa18.07■□□□□ 0.48
VPS26A-201ENST00000263559 KIAA1468Q9P260 1216 aa18.07■□□□□ 0.48
VPS26A-201ENST00000263559 SMCO2A6NFE2 343 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 ICA1Q05084 483 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 PTGDRQ13258 359 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 GPATCH4Q5T3I0 446 aaKnown RBP18.06■□□□□ 0.48
VPS26A-201ENST00000263559 RBM26Q5T8P6 1007 aaKnown RBP18.06■□□□□ 0.48
VPS26A-201ENST00000263559 ADGRF4Q8IZF3 695 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 ZBED3Q96IU2 234 aaPredicted RBP18.06■□□□□ 0.48
VPS26A-201ENST00000263559 JMJD4Q9H9V9 463 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 FAM13BQ9NYF5 915 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 USP25Q9UHP3 1055 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 HERC5Q9UII4 1024 aaKnown RBP18.06■□□□□ 0.48
VPS26A-201ENST00000263559 CCDC194A0A1B0GVG4 234 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 WNT10BO00744 389 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 GH2P01242 217 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 SLC16A2P36021 539 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 STX1AQ16623 288 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 NBPF9Q3BBW0 867 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 LONRF3Q496Y0 759 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 LUZP1Q86V48 1076 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 RAD21O60216 631 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 MCM7P33993 719 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 ZNF165P49910 485 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 ATP2C1P98194 919 aaPredicted RBP18.06■□□□□ 0.48
VPS26A-201ENST00000263559 RASSF7Q02833 373 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 TNIP1Q15025 636 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 FKBP1CQ5VVH2 108 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 USP49Q70CQ1 688 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 C6orf50Q9HD87 102 aa18.06■□□□□ 0.48
VPS26A-201ENST00000263559 C11orf57Q6ZUT1 292 aaPredicted RBP18.05■□□□□ 0.48
VPS26A-201ENST00000263559 NLGN2Q8NFZ4 835 aa18.05■□□□□ 0.48
VPS26A-201ENST00000263559 TMEM39BQ9GZU3 492 aa18.05■□□□□ 0.48
VPS26A-201ENST00000263559 MYOZ2Q9NPC6 264 aa18.05■□□□□ 0.48
VPS26A-201ENST00000263559 GNA11P29992 359 aa18.05■□□□□ 0.48
VPS26A-201ENST00000263559 PRELPP51888 382 aa18.05■□□□□ 0.48
VPS26A-201ENST00000263559 SLFN13Q68D06 897 aa18.05■□□□□ 0.48
VPS26A-201ENST00000263559 CDAN1Q8IWY9 1227 aa18.05■□□□□ 0.48
VPS26A-201ENST00000263559 FERMT2Q96AC1 680 aa18.05■□□□□ 0.48
VPS26A-201ENST00000263559 COA7Q96BR5 231 aa18.05■□□□□ 0.48
VPS26A-201ENST00000263559 TRIM44Q96DX7 344 aaPredicted RBP18.05■□□□□ 0.48
VPS26A-201ENST00000263559 hCG_1984214I3L0E3 225 aa18.04■□□□□ 0.48
VPS26A-201ENST00000263559 MYO1BO43795 1136 aa18.04■□□□□ 0.48
VPS26A-201ENST00000263559 KRBA2Q6ZNG9 492 aa18.04■□□□□ 0.48
VPS26A-201ENST00000263559 ZNF713Q8N859 430 aaPredicted RBP18.04■□□□□ 0.48
VPS26A-201ENST00000263559 PNMA6FA0A0J9YX94 578 aa18.04■□□□□ 0.48
VPS26A-201ENST00000263559 CAVIN2O95810 425 aa18.04■□□□□ 0.48
VPS26A-201ENST00000263559 SLC1A4P43007 532 aa18.04■□□□□ 0.48
VPS26A-201ENST00000263559 INF2Q27J81 1249 aa18.04■□□□□ 0.48
VPS26A-201ENST00000263559 DCAF4Q8WV16 495 aa18.04■□□□□ 0.48
VPS26A-201ENST00000263559 ANO10Q9NW15 660 aa18.04■□□□□ 0.48
VPS26A-201ENST00000263559 LTBP3Q9NS15 1303 aa18.03■□□□□ 0.48
VPS26A-201ENST00000263559 USP17L10C9JJH3 530 aa18.03■□□□□ 0.48
VPS26A-201ENST00000263559 F5H6K3 240 aa18.03■□□□□ 0.48
VPS26A-201ENST00000263559 POLR2DO15514 142 aaKnown RBP18.03■□□□□ 0.48
VPS26A-201ENST00000263559 AP5Z1O43299 807 aa18.03■□□□□ 0.48
VPS26A-201ENST00000263559 KLRC3Q07444 240 aa18.03■□□□□ 0.48
VPS26A-201ENST00000263559 FAM83AQ86UY5 434 aa18.03■□□□□ 0.48
VPS26A-201ENST00000263559 CNNM3Q8NE01 707 aa18.03■□□□□ 0.48
VPS26A-201ENST00000263559 ARFGEF1Q9Y6D6 1849 aa18.03■□□□□ 0.48
VPS26A-201ENST00000263559 ESYT2A0FGR8 921 aa18.03■□□□□ 0.48
VPS26A-201ENST00000263559 C4orf32Q8N8J7 132 aa18.03■□□□□ 0.48
VPS26A-201ENST00000263559 EPSTI1Q96J88 318 aa18.03■□□□□ 0.48
VPS26A-201ENST00000263559 VWA3AA6NCI4 1184 aa18.02■□□□□ 0.48
VPS26A-201ENST00000263559 PPP1R11O60927 126 aaPredicted RBP18.02■□□□□ 0.48
VPS26A-201ENST00000263559 ADCY5O95622 1261 aa18.02■□□□□ 0.48
VPS26A-201ENST00000263559 PLCB2Q00722 1185 aa18.02■□□□□ 0.48
VPS26A-201ENST00000263559 EGFRP00533 1210 aa18.02■□□□□ 0.47
VPS26A-201ENST00000263559 PNOCQ13519 176 aa18.02■□□□□ 0.47
VPS26A-201ENST00000263559 IL17AQ16552 155 aa18.02■□□□□ 0.47
VPS26A-201ENST00000263559 PDILTQ8N807 584 aa18.02■□□□□ 0.47
VPS26A-201ENST00000263559 GMCL1P1Q8NEA9 526 aa18.02■□□□□ 0.47
VPS26A-201ENST00000263559 MTMR8Q96EF0 704 aa18.02■□□□□ 0.47
VPS26A-201ENST00000263559 PGAP2Q9UHJ9 254 aa18.02■□□□□ 0.47
VPS26A-201ENST00000263559 SERTAD1Q9UHV2 236 aa18.02■□□□□ 0.47
VPS26A-201ENST00000263559 BIN1O00499 593 aa18.01■□□□□ 0.47
VPS26A-201ENST00000263559 ZBTB5O15062 677 aa18.01■□□□□ 0.47
VPS26A-201ENST00000263559 ZNF280AP59817 542 aaPredicted RBP18.01■□□□□ 0.47
VPS26A-201ENST00000263559 IQCB1Q15051 598 aa18.01■□□□□ 0.47
VPS26A-201ENST00000263559 MIGA2Q7L4E1 593 aa18.01■□□□□ 0.47
VPS26A-201ENST00000263559 KRT25Q7Z3Z0 450 aa18.01■□□□□ 0.47
VPS26A-201ENST00000263559 SYMPKQ92797 1274 aaKnown RBP18.01■□□□□ 0.47
VPS26A-201ENST00000263559 BIN2Q9UBW5 565 aaPredicted RBP18.01■□□□□ 0.47
VPS26A-201ENST00000263559 SCAF8Q9UPN6 1271 aaKnown RBP18.01■□□□□ 0.47
VPS26A-201ENST00000263559 A0A1W2PRG0 241 aa18.01■□□□□ 0.47
VPS26A-201ENST00000263559 RPS12P25398 132 aaKnown RBP18.01■□□□□ 0.47
VPS26A-201ENST00000263559 FOXN1O15353 648 aa18■□□□□ 0.47
VPS26A-201ENST00000263559 MDM2Q00987 491 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms