RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 HPS5Q9UPZ3 1129 aa19.38■□□□□ 0.69
CHCHD3-201ENST00000262570 GOLGA8BA8MQT2 603 aa19.37■□□□□ 0.69
CHCHD3-201ENST00000262570 KLRF2D3W0D1 207 aa19.37■□□□□ 0.69
CHCHD3-201ENST00000262570 TLR2O60603 784 aa19.37■□□□□ 0.69
CHCHD3-201ENST00000262570 SLC16A2P36021 539 aa19.37■□□□□ 0.69
CHCHD3-201ENST00000262570 IKQ13123 557 aaPredicted RBP19.37■□□□□ 0.69
CHCHD3-201ENST00000262570 CCDC144CPQ8IYA2 1237 aa19.37■□□□□ 0.69
CHCHD3-201ENST00000262570 ATG4CQ96DT6 458 aa19.37■□□□□ 0.69
CHCHD3-201ENST00000262570 UBA5Q9GZZ9 404 aa19.37■□□□□ 0.69
CHCHD3-201ENST00000262570 SAGE1Q9NXZ1 904 aa19.37■□□□□ 0.69
CHCHD3-201ENST00000262570 NAP1L2Q9ULW6 460 aaPredicted RBP19.37■□□□□ 0.69
CHCHD3-201ENST00000262570 ADGRA2Q96PE1 1338 aa19.37■□□□□ 0.69
CHCHD3-201ENST00000262570 ST18O60284 1047 aa19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 PPP2R5BQ15173 497 aa19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 GTF3C2Q8WUA4 911 aaPredicted RBP19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 KIFC2Q96AC6 838 aa19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 BEGAINQ9BUH8 593 aa19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 CPVLQ9H3G5 476 aa19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 R3HDMLQ9H3Y0 253 aa19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 FAM217BQ9NTX9 383 aaPredicted RBP19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 PRR12Q9ULL5 1215 aa19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 RLFQ13129 1914 aa19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 NID2Q14112 1375 aa19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 GOLGA8AA7E2F4 631 aa19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 VWA5AO00534 786 aa19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 TBC1D8O95759 1140 aa19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 GCLCP48506 637 aaPredicted RBP19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 METAP2P50579 478 aaKnown RBP eCLIP19.36■□□□□ 0.692e-6■■■□□ 16.2
CHCHD3-201ENST00000262570 SYDE2Q5VT97 1194 aa19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 SAMD1Q6SPF0 538 aaPredicted RBP19.36■□□□□ 0.69
CHCHD3-201ENST00000262570 CDC27P30260 824 aa19.35■□□□□ 0.69
CHCHD3-201ENST00000262570 GNAQP50148 359 aa19.35■□□□□ 0.69
CHCHD3-201ENST00000262570 RTN1Q16799 776 aa19.35■□□□□ 0.69
CHCHD3-201ENST00000262570 C17orf99Q6UX52 265 aa19.35■□□□□ 0.69
CHCHD3-201ENST00000262570 NOL8Q76FK4 1167 aaKnown RBP19.35■□□□□ 0.69
CHCHD3-201ENST00000262570 NBPF11Q86T75 865 aa19.35■□□□□ 0.69
CHCHD3-201ENST00000262570 MB21D1Q8N884 522 aa19.35■□□□□ 0.69
CHCHD3-201ENST00000262570 LZTS2Q9BRK4 669 aa19.35■□□□□ 0.69
CHCHD3-201ENST00000262570 RBM28Q9NW13 759 aaKnown RBP19.35■□□□□ 0.69
CHCHD3-201ENST00000262570 RBPJLQ9UBG7 517 aa19.35■□□□□ 0.69
CHCHD3-201ENST00000262570 PLEKHA8P1O95397 391 aa19.34■□□□□ 0.69
CHCHD3-201ENST00000262570 FDX1P10109 184 aa19.34■□□□□ 0.69
CHCHD3-201ENST00000262570 BCRP11274 1271 aa19.34■□□□□ 0.69
CHCHD3-201ENST00000262570 SMARCA1P28370 1054 aa19.34■□□□□ 0.69
CHCHD3-201ENST00000262570 ADD1P35611 737 aaKnown RBP19.34■□□□□ 0.69
CHCHD3-201ENST00000262570 SLC35G1Q2M3R5 365 aa19.34■□□□□ 0.69
CHCHD3-201ENST00000262570 ADGRF4Q8IZF3 695 aa19.34■□□□□ 0.69
CHCHD3-201ENST00000262570 RIOX1Q9H6W3 641 aa19.34■□□□□ 0.69
CHCHD3-201ENST00000262570 SLC38A10Q9HBR0 1119 aa19.34■□□□□ 0.69
CHCHD3-201ENST00000262570 TXNRD2Q9NNW7 524 aa19.34■□□□□ 0.69
CHCHD3-201ENST00000262570 LIMCH1Q9UPQ0 1083 aa19.34■□□□□ 0.69
CHCHD3-201ENST00000262570 RABGAP1Q9Y3P9 1069 aa19.34■□□□□ 0.69
CHCHD3-201ENST00000262570 CCDC196A0A1B0GTZ2 297 aa19.33■□□□□ 0.69
CHCHD3-201ENST00000262570 CYTH3O43739 400 aa19.33■□□□□ 0.69
CHCHD3-201ENST00000262570 CNMDO75829 334 aa19.33■□□□□ 0.69
CHCHD3-201ENST00000262570 CD2BP2O95400 341 aaKnown RBP19.33■□□□□ 0.69
CHCHD3-201ENST00000262570 ME3Q16798 604 aa19.33■□□□□ 0.69
CHCHD3-201ENST00000262570 TMTC3Q6ZXV5 915 aa19.33■□□□□ 0.69
CHCHD3-201ENST00000262570 SRBD1Q8N5C6 995 aaKnown RBP19.33■□□□□ 0.69
CHCHD3-201ENST00000262570 REPS2Q8NFH8 660 aa19.33■□□□□ 0.69
CHCHD3-201ENST00000262570 JMJD4Q9H9V9 463 aa19.33■□□□□ 0.69
CHCHD3-201ENST00000262570 BTBD7Q9P203 1132 aa19.33■□□□□ 0.69
CHCHD3-201ENST00000262570 CPA4Q9UI42 421 aa19.33■□□□□ 0.69
CHCHD3-201ENST00000262570 PARP14Q460N5 1801 aa19.33■□□□□ 0.68
CHCHD3-201ENST00000262570 PEX10O60683 326 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 PFKFB2O60825 505 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 CCT2P78371 535 aaKnown RBP19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 STK3Q13188 491 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 TMEM132BQ14DG7 1078 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 FAM110CQ1W6H9 321 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 CMTR1Q8N1G2 835 aaKnown RBP19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 ANKRD13CQ8N6S4 541 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 SPZ1Q9BXG8 430 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 SLKQ9H2G2 1235 aaPredicted RBP19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 RANBP17Q9H2T7 1088 aaKnown RBP19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 MORF4L1Q9UBU8 362 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 ZBED4O75132 1171 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 LARGE1O95461 756 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 FUT2Q10981 343 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 Q3C1V9 767 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 MTMR8Q96EF0 704 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 PAGR1Q9BTK6 254 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 NCOA5Q9HCD5 579 aaKnown RBP19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 VAT1LQ9HCJ6 419 aa19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 ZNF214Q9UL59 606 aaPredicted RBP19.32■□□□□ 0.68
CHCHD3-201ENST00000262570 ATP2A1O14983 1001 aa19.31■□□□□ 0.68
CHCHD3-201ENST00000262570 DHX16O60231 1041 aaKnown RBP19.31■□□□□ 0.68
CHCHD3-201ENST00000262570 MCM2P49736 904 aa19.31■□□□□ 0.68
CHCHD3-201ENST00000262570 SNAP25P60880 206 aa19.31■□□□□ 0.68
CHCHD3-201ENST00000262570 ERVK-9P63128 1117 aa19.31■□□□□ 0.68
CHCHD3-201ENST00000262570 ERVK-24P63145 666 aa19.31■□□□□ 0.68
CHCHD3-201ENST00000262570 SCRN1Q12765 414 aa19.31■□□□□ 0.68
CHCHD3-201ENST00000262570 NTRK3Q16288 839 aa19.31■□□□□ 0.68
CHCHD3-201ENST00000262570 CCDC82Q8N4S0 544 aa19.31■□□□□ 0.68
CHCHD3-201ENST00000262570 GPRC5AQ8NFJ5 357 aa19.31■□□□□ 0.68
CHCHD3-201ENST00000262570 ZSCAN31Q96LW9 406 aaPredicted RBP19.31■□□□□ 0.68
CHCHD3-201ENST00000262570 OAZ1P54368 228 aa19.3■□□□□ 0.68
CHCHD3-201ENST00000262570 NOM1Q5C9Z4 860 aaKnown RBP19.3■□□□□ 0.68
CHCHD3-201ENST00000262570 CTDP1Q9Y5B0 961 aaPredicted RBP19.3■□□□□ 0.68
CHCHD3-201ENST00000262570 ZNF536O15090 1300 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms