RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 FSTL1Q12841 308 aa31.84■■■□□ 2.69
SMARCD3-201ENST00000262188 LPAR1Q92633 364 aa31.84■■■□□ 2.69
SMARCD3-201ENST00000262188 TMOD4Q9NZQ9 345 aa31.84■■■□□ 2.69
SMARCD3-201ENST00000262188 KCNH4Q9UQ05 1017 aa31.84■■■□□ 2.69
SMARCD3-201ENST00000262188 A0A0G2JLL6 359 aaPredicted RBP31.83■■■□□ 2.69
SMARCD3-201ENST00000262188 ZNF157P51786 506 aaPredicted RBP31.83■■■□□ 2.69
SMARCD3-201ENST00000262188 PRRT2Q7Z6L0 340 aaPredicted RBP31.83■■■□□ 2.69
SMARCD3-201ENST00000262188 PIGSQ96S52 555 aa31.83■■■□□ 2.69
SMARCD3-201ENST00000262188 WDR46O15213 610 aaKnown RBP31.83■■■□□ 2.69
SMARCD3-201ENST00000262188 SH3D19Q5HYK7 790 aa31.83■■■□□ 2.69
SMARCD3-201ENST00000262188 JMJD4Q9H9V9 463 aa31.83■■■□□ 2.69
SMARCD3-201ENST00000262188 TLL2Q9Y6L7 1015 aa31.83■■■□□ 2.69
SMARCD3-201ENST00000262188 UNCXA6NJT0 531 aa31.82■■■□□ 2.68
SMARCD3-201ENST00000262188 TMEM88BA6NKF7 163 aa31.82■■■□□ 2.68
SMARCD3-201ENST00000262188 PKP1Q13835 747 aa31.82■■■□□ 2.68
SMARCD3-201ENST00000262188 KIFC2Q96AC6 838 aa31.82■■■□□ 2.68
SMARCD3-201ENST00000262188 C12orf42Q96LP6 360 aa31.82■■■□□ 2.68
SMARCD3-201ENST00000262188 MOGSQ13724 837 aa31.81■■■□□ 2.68
SMARCD3-201ENST00000262188 PKN1Q16512 942 aa31.81■■■□□ 2.68
SMARCD3-201ENST00000262188 SPRYD7Q5W111 196 aa31.81■■■□□ 2.68
SMARCD3-201ENST00000262188 SPZ1Q9BXG8 430 aa31.81■■■□□ 2.68
SMARCD3-201ENST00000262188 CXCL11O14625 94 aa31.81■■■□□ 2.68
SMARCD3-201ENST00000262188 TAL1P17542 331 aaPredicted RBP31.81■■■□□ 2.68
SMARCD3-201ENST00000262188 STAT2P52630 851 aa31.81■■■□□ 2.68
SMARCD3-201ENST00000262188 OTUD7BQ6GQQ9 843 aa31.81■■■□□ 2.68
SMARCD3-201ENST00000262188 FAM184AQ8NB25 1140 aa31.81■■■□□ 2.68
SMARCD3-201ENST00000262188 RIOX1Q9H6W3 641 aa31.81■■■□□ 2.68
SMARCD3-201ENST00000262188 SYDE2Q5VT97 1194 aa31.8■■■□□ 2.68
SMARCD3-201ENST00000262188 RASAL3Q86YV0 1011 aa31.8■■■□□ 2.68
SMARCD3-201ENST00000262188 TRIM22Q8IYM9 498 aa31.8■■■□□ 2.68
SMARCD3-201ENST00000262188 LZTS2Q9BRK4 669 aa31.8■■■□□ 2.68
SMARCD3-201ENST00000262188 RNF26Q9BY78 433 aaPredicted RBP31.8■■■□□ 2.68
SMARCD3-201ENST00000262188 PRR12Q9ULL5 1215 aa31.8■■■□□ 2.68
SMARCD3-201ENST00000262188 PRPF3O43395 683 aaKnown RBP31.79■■■□□ 2.68
SMARCD3-201ENST00000262188 HMGN5P82970 282 aaKnown RBP31.79■■■□□ 2.68
SMARCD3-201ENST00000262188 GUCY1B3Q02153 619 aa31.79■■■□□ 2.68
SMARCD3-201ENST00000262188 GPKOWQ92917 476 aaPredicted RBP eCLIP31.79■■■□□ 2.68
SMARCD3-201ENST00000262188 SHISA4Q96DD7 197 aa31.79■■■□□ 2.68
SMARCD3-201ENST00000262188 MYH6P13533 1939 aa31.79■■■□□ 2.68
SMARCD3-201ENST00000262188 FLOT1O75955 427 aa31.79■■■□□ 2.68
SMARCD3-201ENST00000262188 RGMBQ6NW40 437 aa31.79■■■□□ 2.68
SMARCD3-201ENST00000262188 DDIT3P35638 169 aa31.78■■■□□ 2.68
SMARCD3-201ENST00000262188 AKAP17AQ02040 695 aaKnown RBP31.78■■■□□ 2.68
SMARCD3-201ENST00000262188 GRM1Q13255 1194 aa31.78■■■□□ 2.68
SMARCD3-201ENST00000262188 MS4A4AQ96JQ5 239 aa31.78■■■□□ 2.68
SMARCD3-201ENST00000262188 ALG1Q9BT22 464 aa31.78■■■□□ 2.68
SMARCD3-201ENST00000262188 SNAPC2Q13487 334 aa31.77■■■□□ 2.68
SMARCD3-201ENST00000262188 BTNL9Q6UXG8 535 aa31.77■■■□□ 2.68
SMARCD3-201ENST00000262188 STK36Q9NRP7 1315 aa31.77■■■□□ 2.68
SMARCD3-201ENST00000262188 FOXD4L5Q5VV16 416 aaPredicted RBP31.77■■■□□ 2.68
SMARCD3-201ENST00000262188 FOXD4L4Q8WXT5 416 aaPredicted RBP31.77■■■□□ 2.68
SMARCD3-201ENST00000262188 FEM1BQ9UK73 627 aa31.77■■■□□ 2.68
SMARCD3-201ENST00000262188 PRDM4Q9UKN5 801 aa31.77■■■□□ 2.68
SMARCD3-201ENST00000262188 LOC285556D6RIA3 1793 aa31.76■■■□□ 2.68
SMARCD3-201ENST00000262188 PPP1R11O60927 126 aaPredicted RBP31.76■■■□□ 2.68
SMARCD3-201ENST00000262188 DEXIO95424 95 aa31.76■■■□□ 2.68
SMARCD3-201ENST00000262188 RRP36Q96EU6 259 aaKnown RBP31.76■■■□□ 2.68
SMARCD3-201ENST00000262188 SYT1P21579 422 aa31.76■■■□□ 2.67
SMARCD3-201ENST00000262188 LARP1BQ659C4 914 aaKnown RBP31.76■■■□□ 2.67
SMARCD3-201ENST00000262188 VPS54Q9P1Q0 977 aa31.76■■■□□ 2.67
SMARCD3-201ENST00000262188 GPAT2Q6NUI2 795 aa31.75■■■□□ 2.67
SMARCD3-201ENST00000262188 PAXIP1Q6ZW49 1069 aaPredicted RBP31.75■■■□□ 2.67
SMARCD3-201ENST00000262188 SLF1Q9BQI6 1058 aa31.75■■■□□ 2.67
SMARCD3-201ENST00000262188 CWC22Q9HCG8 908 aaKnown RBP31.75■■■□□ 2.67
SMARCD3-201ENST00000262188 HTRA3P83110 453 aa31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 CDC37Q16543 378 aaPredicted RBP31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 QRICH1Q2TAL8 776 aa31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 CATSPERGQ6ZRH7 1159 aa31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 CHURC1Q8WUH1 139 aa31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 BRI3BPQ8WY22 251 aa31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 CCL15-CCL14A0A0B4J2E2 113 aa31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 PEX10O60683 326 aa31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 SCG2P13521 617 aa31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 SMARCA1P28370 1054 aa31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 CCL15Q16663 113 aa31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 PFKFB3Q16875 520 aaPredicted RBP31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 CCDC174Q6PII3 467 aa31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 HEATR3Q7Z4Q2 680 aa31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 PROCA1Q8NCQ7 364 aaPredicted RBP31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 ATG4CQ96DT6 458 aa31.74■■■□□ 2.67
SMARCD3-201ENST00000262188 ZBTB48P10074 688 aaPredicted RBP31.73■■■□□ 2.67
SMARCD3-201ENST00000262188 WWC2Q6AWC2 1192 aa31.73■■■□□ 2.67
SMARCD3-201ENST00000262188 TYW1BQ6NUM6 668 aa31.73■■■□□ 2.67
SMARCD3-201ENST00000262188 COA7Q96BR5 231 aa31.73■■■□□ 2.67
SMARCD3-201ENST00000262188 MTMR8Q96EF0 704 aa31.73■■■□□ 2.67
SMARCD3-201ENST00000262188 CYP4F22Q6NT55 531 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 FAM160B2Q86V87 743 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 ZIC5Q96T25 663 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 SEC63Q9UGP8 760 aaKnown RBP31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 PPP1R9AQ9ULJ8 1098 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 KCNJ14Q9UNX9 436 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 RLFQ13129 1914 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 PARP14Q460N5 1801 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 FAM155AB1AL88 458 aaPredicted RBP31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 USP17L15C9J2P7 530 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 USP17L13C9JLJ4 530 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 USP17L11C9JVI0 530 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 USP17L18D6R9N7 530 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 USP17L22D6RA61 530 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 USP17L17D6RBQ6 530 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms