RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 MYH4Q9Y623 1939 aa13.59□□□□□ -0.23
PFDN1-201ENST00000261813 F5H6K3 240 aa13.58□□□□□ -0.23
PFDN1-201ENST00000261813 NDUFB10O96000 172 aa13.58□□□□□ -0.23
PFDN1-201ENST00000261813 KLRC3Q07444 240 aa13.58□□□□□ -0.23
PFDN1-201ENST00000261813 KRT32Q14532 448 aa13.58□□□□□ -0.23
PFDN1-201ENST00000261813 ADCK5Q3MIX3 580 aa13.58□□□□□ -0.23
PFDN1-201ENST00000261813 PPP4R3BQ5MIZ7 849 aa13.58□□□□□ -0.23
PFDN1-201ENST00000261813 CATSPERGQ6ZRH7 1159 aa13.58□□□□□ -0.23
PFDN1-201ENST00000261813 ZSCAN10Q96SZ4 725 aaPredicted RBP13.58□□□□□ -0.23
PFDN1-201ENST00000261813 PARK7Q99497 189 aaKnown RBP13.58□□□□□ -0.23
PFDN1-201ENST00000261813 TMEM47Q9BQJ4 181 aa13.58□□□□□ -0.23
PFDN1-201ENST00000261813 ASCC2Q9H1I8 757 aaPredicted RBP13.58□□□□□ -0.23
PFDN1-201ENST00000261813 RPAP3Q9H6T3 665 aaPredicted RBP13.58□□□□□ -0.23
PFDN1-201ENST00000261813 ZFYVE28Q9HCC9 887 aa13.58□□□□□ -0.23
PFDN1-201ENST00000261813 GOPCQ9HD26 462 aa13.58□□□□□ -0.23
PFDN1-201ENST00000261813 SNX14Q9Y5W7 946 aa13.58□□□□□ -0.23
PFDN1-201ENST00000261813 USP17L15C9J2P7 530 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 USP17L13C9JLJ4 530 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 USP17L11C9JVI0 530 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 USP17L18D6R9N7 530 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 USP17L22D6RA61 530 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 USP17L17D6RBQ6 530 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 USP17L19D6RCP7 530 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 USP17L20D6RJB6 530 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 WDR46O15213 610 aaKnown RBP13.58□□□□□ -0.24
PFDN1-201ENST00000261813 RAD21O60216 631 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 TLR2O60603 784 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 TOP1P11387 765 aaKnown RBP13.58□□□□□ -0.24
PFDN1-201ENST00000261813 USP17L24Q0WX57 530 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 PABPC4Q13310 644 aaKnown RBP eCLIP13.58□□□□□ -0.24
PFDN1-201ENST00000261813 SEC23AQ15436 765 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 SLFN13Q68D06 897 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 RASGRP2Q7LDG7 609 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 CHST3Q7LGC8 479 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 DGKHQ86XP1 1220 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 ENAHQ8N8S7 591 aaPredicted RBP13.58□□□□□ -0.24
PFDN1-201ENST00000261813 GMCL1P1Q8NEA9 526 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 IL17RAQ96F46 866 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 TTC14Q96N46 770 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 NUP88Q99567 741 aaPredicted RBP13.58□□□□□ -0.24
PFDN1-201ENST00000261813 PNMA3Q9UL41 463 aa13.58□□□□□ -0.24
PFDN1-201ENST00000261813 OSBPP22059 807 aa13.57□□□□□ -0.24
PFDN1-201ENST00000261813 PSMA5P28066 241 aa13.57□□□□□ -0.24
PFDN1-201ENST00000261813 FOSBP53539 338 aa13.57□□□□□ -0.24
PFDN1-201ENST00000261813 SOX10P56693 466 aa13.57□□□□□ -0.24
PFDN1-201ENST00000261813 IRX3P78415 501 aaPredicted RBP13.57□□□□□ -0.24
PFDN1-201ENST00000261813 RABEP1Q15276 862 aa13.57□□□□□ -0.24
PFDN1-201ENST00000261813 CCDC178Q5BJE1 867 aa13.57□□□□□ -0.24
PFDN1-201ENST00000261813 FAM83BQ5T0W9 1011 aa13.57□□□□□ -0.24
PFDN1-201ENST00000261813 C17orf99Q6UX52 265 aa13.57□□□□□ -0.24
PFDN1-201ENST00000261813 CTU1Q7Z7A3 348 aaKnown RBP13.57□□□□□ -0.24
PFDN1-201ENST00000261813 ANKS1AQ92625 1134 aa13.57□□□□□ -0.24
PFDN1-201ENST00000261813 NEK1Q96PY6 1258 aa13.57□□□□□ -0.24
PFDN1-201ENST00000261813 P2RX7Q99572 595 aaKnown RBP13.57□□□□□ -0.24
PFDN1-201ENST00000261813 UBAC1Q9BSL1 405 aa13.57□□□□□ -0.24
PFDN1-201ENST00000261813 GPR25O00155 361 aa13.56□□□□□ -0.24
PFDN1-201ENST00000261813 POTEEQ6S8J3 1075 aa13.56□□□□□ -0.24
PFDN1-201ENST00000261813 CHMP4CQ96CF2 233 aa13.56□□□□□ -0.24
PFDN1-201ENST00000261813 TANGO6Q9C0B7 1094 aa13.56□□□□□ -0.24
PFDN1-201ENST00000261813 SENP2Q9HC62 589 aa13.56□□□□□ -0.24
PFDN1-201ENST00000261813 CPA4Q9UI42 421 aa13.56□□□□□ -0.24
PFDN1-201ENST00000261813 MTMR7Q9Y216 660 aa13.56□□□□□ -0.24
PFDN1-201ENST00000261813 IFIT3O14879 490 aaKnown RBP13.55□□□□□ -0.24
PFDN1-201ENST00000261813 PRC1O43663 620 aa13.55□□□□□ -0.24
PFDN1-201ENST00000261813 PEX10O60683 326 aa13.55□□□□□ -0.24
PFDN1-201ENST00000261813 HMGB1P09429 215 aaKnown RBP13.55□□□□□ -0.24
PFDN1-201ENST00000261813 BCRP11274 1271 aa13.55□□□□□ -0.24
PFDN1-201ENST00000261813 MCM5P33992 734 aa13.55□□□□□ -0.24
PFDN1-201ENST00000261813 PBX2P40425 430 aa13.55□□□□□ -0.24
PFDN1-201ENST00000261813 HERVK_113P62684 666 aa13.55□□□□□ -0.24
PFDN1-201ENST00000261813 NOM1Q5C9Z4 860 aaKnown RBP13.55□□□□□ -0.24
PFDN1-201ENST00000261813 IGDCC4Q8TDY8 1250 aa13.55□□□□□ -0.24
PFDN1-201ENST00000261813 SMCR8Q8TEV9 937 aaPredicted RBP13.55□□□□□ -0.24
PFDN1-201ENST00000261813 GMCL1Q96IK5 515 aa13.55□□□□□ -0.24
PFDN1-201ENST00000261813 TM6SF1Q9BZW5 370 aa13.55□□□□□ -0.24
PFDN1-201ENST00000261813 FBXO28Q9NVF7 368 aa13.55□□□□□ -0.24
PFDN1-201ENST00000261813 SPDYE16A6NNV3 312 aaPredicted RBP13.54□□□□□ -0.24
PFDN1-201ENST00000261813 FLOT1O75955 427 aa13.54□□□□□ -0.24
PFDN1-201ENST00000261813 PDHBP11177 359 aa13.54□□□□□ -0.24
PFDN1-201ENST00000261813 BMP3P12645 472 aa13.54□□□□□ -0.24
PFDN1-201ENST00000261813 CPA1P15085 419 aa13.54□□□□□ -0.24
PFDN1-201ENST00000261813 SLC1A4P43007 532 aa13.54□□□□□ -0.24
PFDN1-201ENST00000261813 EXOSC10Q01780 885 aaKnown RBP13.54□□□□□ -0.24
PFDN1-201ENST00000261813 PKN2Q16513 984 aaKnown RBP13.54□□□□□ -0.24
PFDN1-201ENST00000261813 TMEM67Q5HYA8 995 aa13.54□□□□□ -0.24
PFDN1-201ENST00000261813 IFIT1BQ5T764 474 aaKnown RBP13.54□□□□□ -0.24
PFDN1-201ENST00000261813 PNMA1Q8ND90 353 aa13.54□□□□□ -0.24
PFDN1-201ENST00000261813 ZNF296Q8WUU4 475 aaPredicted RBP13.54□□□□□ -0.24
PFDN1-201ENST00000261813 DCAF4Q8WV16 495 aa13.54□□□□□ -0.24
PFDN1-201ENST00000261813 TCEANC2Q96MN5 208 aa13.54□□□□□ -0.24
PFDN1-201ENST00000261813 JAKMIP1Q96N16 626 aaKnown RBP13.54□□□□□ -0.24
PFDN1-201ENST00000261813 MTA3Q9BTC8 594 aa13.54□□□□□ -0.24
PFDN1-201ENST00000261813 LRRC2Q9BYS8 371 aa13.54□□□□□ -0.24
PFDN1-201ENST00000261813 KAT14Q9H8E8 782 aa13.54□□□□□ -0.24
PFDN1-201ENST00000261813 RLFQ13129 1914 aa13.54□□□□□ -0.24
PFDN1-201ENST00000261813 SH2B2O14492 632 aaPredicted RBP13.53□□□□□ -0.24
PFDN1-201ENST00000261813 CNMDO75829 334 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 SNHG28P0DPA3 235 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 PRKCSHP14314 528 aaPredicted RBP13.53□□□□□ -0.24
PFDN1-201ENST00000261813 GCLCP48506 637 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms