RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 IVNS1ABPQ9Y6Y0 642 aa21.91■■□□□ 1.1
CYSTM1-201ENST00000261811 ECM2O94769 699 aaPredicted RBP21.9■■□□□ 1.1
CYSTM1-201ENST00000261811 SLC25A27O95847 323 aa21.9■■□□□ 1.1
CYSTM1-201ENST00000261811 SNHG28P0DPA3 235 aa21.9■■□□□ 1.1
CYSTM1-201ENST00000261811 LIFRP42702 1097 aa21.9■■□□□ 1.1
CYSTM1-201ENST00000261811 ANTXR2P58335 489 aa21.9■■□□□ 1.1
CYSTM1-201ENST00000261811 COL13A1Q5TAT6 717 aaPredicted RBP21.9■■□□□ 1.1
CYSTM1-201ENST00000261811 WDR78Q5VTH9 848 aa21.9■■□□□ 1.1
CYSTM1-201ENST00000261811 TRIM47Q96LD4 638 aa21.9■■□□□ 1.1
CYSTM1-201ENST00000261811 GPCPD1Q9NPB8 672 aa21.9■■□□□ 1.1
CYSTM1-201ENST00000261811 PNMA2Q9UL42 364 aa21.9■■□□□ 1.1
CYSTM1-201ENST00000261811 FRMPD2Q68DX3 1309 aaPredicted RBP21.9■■□□□ 1.1
CYSTM1-201ENST00000261811 CNMDO75829 334 aa21.89■■□□□ 1.1
CYSTM1-201ENST00000261811 CALM1P0DP23 149 aa21.89■■□□□ 1.1
CYSTM1-201ENST00000261811 CALM2P0DP24 149 aa21.89■■□□□ 1.1
CYSTM1-201ENST00000261811 CALM3P0DP25 149 aa21.89■■□□□ 1.1
CYSTM1-201ENST00000261811 STAT3P40763 770 aa21.89■■□□□ 1.1
CYSTM1-201ENST00000261811 OAZ1P54368 228 aa21.89■■□□□ 1.1
CYSTM1-201ENST00000261811 Q3C1V9 767 aa21.89■■□□□ 1.1
CYSTM1-201ENST00000261811 ADCK5Q3MIX3 580 aa21.89■■□□□ 1.1
CYSTM1-201ENST00000261811 BTNL9Q6UXG8 535 aa21.89■■□□□ 1.1
CYSTM1-201ENST00000261811 SHCBP1Q8NEM2 672 aa21.89■■□□□ 1.1
CYSTM1-201ENST00000261811 ARHGAP39Q9C0H5 1083 aa21.89■■□□□ 1.1
CYSTM1-201ENST00000261811 MROH8Q9H579 483 aa21.89■■□□□ 1.1
CYSTM1-201ENST00000261811 SH2B2O14492 632 aaPredicted RBP21.88■■□□□ 1.09
CYSTM1-201ENST00000261811 SYDE2Q5VT97 1194 aa21.88■■□□□ 1.09
CYSTM1-201ENST00000261811 FBXO46Q6PJ61 603 aaPredicted RBP21.88■■□□□ 1.09
CYSTM1-201ENST00000261811 TEX13BQ9BXU2 312 aa21.88■■□□□ 1.09
CYSTM1-201ENST00000261811 LY9Q9HBG7 655 aa21.88■■□□□ 1.09
CYSTM1-201ENST00000261811 SLC38A10Q9HBR0 1119 aa21.88■■□□□ 1.09
CYSTM1-201ENST00000261811 SRRDQ9UH36 339 aa21.88■■□□□ 1.09
CYSTM1-201ENST00000261811 ATP2A1O14983 1001 aa21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 STRNO43815 780 aa21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 DDAH1O94760 285 aa21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 CASTP20810 708 aaKnown RBP21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 KIF5BP33176 963 aa21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 ANAPC15P60006 121 aa21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 EXOSC10Q01780 885 aaKnown RBP21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 TMEM132BQ14DG7 1078 aa21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 PLEKHH3Q7Z736 793 aa21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 NCAPG2Q86XI2 1143 aa21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 CTCFLQ8NI51 663 aaPredicted RBP21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 MOV10L1Q9BXT6 1211 aaKnown RBP21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 UPF2Q9HAU5 1272 aaKnown RBP21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 PRR12Q9ULL5 1215 aa21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 PTPN22Q9Y2R2 807 aa21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 SLC12A7Q9Y666 1083 aa21.87■■□□□ 1.09
CYSTM1-201ENST00000261811 GPR142Q7Z601 462 aa21.86■■□□□ 1.09
CYSTM1-201ENST00000261811 RIOX2Q8IUF8 465 aa21.86■■□□□ 1.09
CYSTM1-201ENST00000261811 ZNF654Q8IZM8 581 aa21.86■■□□□ 1.09
CYSTM1-201ENST00000261811 TNS4Q8IZW8 715 aa21.86■■□□□ 1.09
CYSTM1-201ENST00000261811 CPXCR1Q8N123 301 aa21.86■■□□□ 1.09
CYSTM1-201ENST00000261811 RAET1EQ8TD07 263 aa21.86■■□□□ 1.09
CYSTM1-201ENST00000261811 SOCS4Q8WXH5 440 aa21.86■■□□□ 1.09
CYSTM1-201ENST00000261811 MAP3K14Q99558 947 aa21.86■■□□□ 1.09
CYSTM1-201ENST00000261811 NUDT12Q9BQG2 462 aa21.86■■□□□ 1.09
CYSTM1-201ENST00000261811 TM6SF1Q9BZW5 370 aa21.86■■□□□ 1.09
CYSTM1-201ENST00000261811 CYP46A1Q9Y6A2 500 aa21.86■■□□□ 1.09
CYSTM1-201ENST00000261811 PLXNA1Q9UIW2 1896 aa21.86■■□□□ 1.09
CYSTM1-201ENST00000261811 DHX16O60231 1041 aaKnown RBP21.85■■□□□ 1.09
CYSTM1-201ENST00000261811 GOLGA8HP0CJ92 632 aa21.85■■□□□ 1.09
CYSTM1-201ENST00000261811 SLC16A2P36021 539 aa21.85■■□□□ 1.09
CYSTM1-201ENST00000261811 C8orf34Q49A92 452 aa21.85■■□□□ 1.09
CYSTM1-201ENST00000261811 SNRNP48Q6IEG0 339 aaKnown RBP21.85■■□□□ 1.09
CYSTM1-201ENST00000261811 POTEEQ6S8J3 1075 aa21.85■■□□□ 1.09
CYSTM1-201ENST00000261811 NUP133Q8WUM0 1156 aa21.85■■□□□ 1.09
CYSTM1-201ENST00000261811 MCOLN1Q9GZU1 580 aa21.85■■□□□ 1.09
CYSTM1-201ENST00000261811 PORCNQ9H237 461 aa21.85■■□□□ 1.09
CYSTM1-201ENST00000261811 ZNF214Q9UL59 606 aaPredicted RBP21.85■■□□□ 1.09
CYSTM1-201ENST00000261811 PEX10O60683 326 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 ERCC3P19447 782 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 RPS6KB1P23443 525 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 CTGFP29279 349 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 SLC4A3P48751 1232 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 GNAQP50148 359 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 GRM4Q14833 912 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 TTBK2Q6IQ55 1244 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 RUFY3Q7L099 469 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 RASGRP2Q7LDG7 609 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 SGMS1Q86VZ5 419 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 REPS2Q8NFH8 660 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 LRRC2Q9BYS8 371 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 SLC5A4Q9NY91 659 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 FBXO40Q9UH90 709 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 ZNF236Q9UL36 1845 aa21.84■■□□□ 1.09
CYSTM1-201ENST00000261811 SLC15A5A6NIM6 579 aa21.83■■□□□ 1.09
CYSTM1-201ENST00000261811 KLRF2D3W0D1 207 aa21.83■■□□□ 1.09
CYSTM1-201ENST00000261811 FCER1AP12319 257 aa21.83■■□□□ 1.09
CYSTM1-201ENST00000261811 TROAPQ12815 778 aa21.83■■□□□ 1.09
CYSTM1-201ENST00000261811 TKFCQ3LXA3 575 aa21.83■■□□□ 1.09
CYSTM1-201ENST00000261811 NBPF11Q86T75 865 aa21.83■■□□□ 1.09
CYSTM1-201ENST00000261811 LZTS2Q9BRK4 669 aa21.83■■□□□ 1.09
CYSTM1-201ENST00000261811 RANBP17Q9H2T7 1088 aaKnown RBP21.83■■□□□ 1.09
CYSTM1-201ENST00000261811 RAVER2Q9HCJ3 691 aaKnown RBP21.83■■□□□ 1.09
CYSTM1-201ENST00000261811 ZSWIM6Q9HCJ5 1215 aa21.83■■□□□ 1.09
CYSTM1-201ENST00000261811 BAZ2BQ9UIF8 2168 aaKnown RBP21.83■■□□□ 1.09
CYSTM1-201ENST00000261811 FLT3LGP49771 235 aa21.82■■□□□ 1.08
CYSTM1-201ENST00000261811 PRKCZQ05513 592 aa21.82■■□□□ 1.08
CYSTM1-201ENST00000261811 IRF5Q13568 498 aa21.82■■□□□ 1.08
CYSTM1-201ENST00000261811 CCDC174Q6PII3 467 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms