RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 USHBP1Q8N6Y0 703 aa8.1□□□□□ -1.11
TRA2B-201ENST00000259043 DAGLBQ8NCG7 672 aa8.1□□□□□ -1.11
TRA2B-201ENST00000259043 RELTQ969Z4 430 aa8.1□□□□□ -1.11
TRA2B-201ENST00000259043 GPRASP2Q96D09 838 aa8.1□□□□□ -1.11
TRA2B-201ENST00000259043 FERD3LQ96RJ6 166 aa8.1□□□□□ -1.11
TRA2B-201ENST00000259043 TM9SF2Q99805 663 aa8.1□□□□□ -1.11
TRA2B-201ENST00000259043 PRDM14Q9GZV8 571 aa8.1□□□□□ -1.11
TRA2B-201ENST00000259043 PARD6AQ9NPB6 346 aa8.1□□□□□ -1.11
TRA2B-201ENST00000259043 PODXL2Q9NZ53 605 aa8.1□□□□□ -1.11
TRA2B-201ENST00000259043 EBF1Q9UH73 591 aa8.1□□□□□ -1.11
TRA2B-201ENST00000259043 CHMP4BP1P59074 171 aa8.09□□□□□ -1.11
TRA2B-201ENST00000259043 RUFY4Q6ZNE9 571 aa8.09□□□□□ -1.11
TRA2B-201ENST00000259043 IRF2BP1Q8IU81 584 aa8.09□□□□□ -1.11
TRA2B-201ENST00000259043 LILRA2Q8N149 483 aa8.09□□□□□ -1.11
TRA2B-201ENST00000259043 SPATA32Q96LK8 384 aa8.09□□□□□ -1.11
TRA2B-201ENST00000259043 SUCOQ9UBS9 1254 aaKnown RBP8.09□□□□□ -1.11
TRA2B-201ENST00000259043 C9IYK1 514 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 SHOXO15266 292 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 SIGLEC6O43699 453 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 PRAMEF1O95521 474 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 TRHRP34981 398 aaPredicted RBP8.08□□□□□ -1.12
TRA2B-201ENST00000259043 ZYXQ15942 572 aaKnown RBP8.08□□□□□ -1.12
TRA2B-201ENST00000259043 CLEC16AQ2KHT3 1053 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 CCDC81Q6ZN84 652 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 PDZD8Q8NEN9 1154 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 TCTN2Q96GX1 697 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 G6PC3Q9BUM1 346 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 TGIF2Q9GZN2 237 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 MCOLN1Q9GZU1 580 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 SLC6A17Q9H1V8 727 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 MINPP1Q9UNW1 487 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 EFR3BQ9Y2G0 817 aa8.08□□□□□ -1.12
TRA2B-201ENST00000259043 PEX10O60683 326 aa8.07□□□□□ -1.12
TRA2B-201ENST00000259043 GUCY2CP25092 1073 aa8.07□□□□□ -1.12
TRA2B-201ENST00000259043 UNC5AQ6ZN44 842 aa8.07□□□□□ -1.12
TRA2B-201ENST00000259043 PPFIBP1Q86W92 1011 aa8.07□□□□□ -1.12
TRA2B-201ENST00000259043 ZNF655Q8N720 491 aaPredicted RBP8.07□□□□□ -1.12
TRA2B-201ENST00000259043 ZNF428Q96B54 188 aa8.07□□□□□ -1.12
TRA2B-201ENST00000259043 ASCC2Q9H1I8 757 aaPredicted RBP8.07□□□□□ -1.12
TRA2B-201ENST00000259043 ACBD3Q9H3P7 528 aa8.07□□□□□ -1.12
TRA2B-201ENST00000259043 FAM86C2PA6NEL3 165 aa8.06□□□□□ -1.12
TRA2B-201ENST00000259043 SEMA7AO75326 666 aa8.06□□□□□ -1.12
TRA2B-201ENST00000259043 PMS1P54277 932 aaKnown RBP8.06□□□□□ -1.12
TRA2B-201ENST00000259043 DLG4P78352 724 aa8.06□□□□□ -1.12
TRA2B-201ENST00000259043 AUHQ13825 339 aaKnown RBP8.06□□□□□ -1.12
TRA2B-201ENST00000259043 BBS9Q3SYG4 887 aa8.06□□□□□ -1.12
TRA2B-201ENST00000259043 RNF111Q6ZNA4 994 aa8.06□□□□□ -1.12
TRA2B-201ENST00000259043 OXR1Q8N573 874 aa8.06□□□□□ -1.12
TRA2B-201ENST00000259043 LINC01599Q8WXQ3 324 aa8.06□□□□□ -1.12
TRA2B-201ENST00000259043 DHRS1Q96LJ7 313 aa8.06□□□□□ -1.12
TRA2B-201ENST00000259043 MKRN2Q9H000 416 aaKnown RBP8.06□□□□□ -1.12
TRA2B-201ENST00000259043 ZCCHC4Q9H5U6 513 aa8.06□□□□□ -1.12
TRA2B-201ENST00000259043 C19orf44Q9H6X5 657 aa8.06□□□□□ -1.12
TRA2B-201ENST00000259043 TMEM82A0PJX8 343 aa8.05□□□□□ -1.12
TRA2B-201ENST00000259043 BMP7P18075 431 aa8.05□□□□□ -1.12
TRA2B-201ENST00000259043 GIPRP48546 466 aa8.05□□□□□ -1.12
TRA2B-201ENST00000259043 FBXW10Q5XX13 1052 aa8.05□□□□□ -1.12
TRA2B-201ENST00000259043 LINC00116Q8NCU8 138 aa8.05□□□□□ -1.12
TRA2B-201ENST00000259043 FOXP3Q9BZS1 431 aa8.05□□□□□ -1.12
TRA2B-201ENST00000259043 CWC22Q9HCG8 908 aaKnown RBP8.05□□□□□ -1.12
TRA2B-201ENST00000259043 PRR13Q9NZ81 148 aa8.05□□□□□ -1.12
TRA2B-201ENST00000259043 LTBP3Q9NS15 1303 aa8.04□□□□□ -1.12
TRA2B-201ENST00000259043 MYOCOSA0A1B0GUC4 107 aa8.04□□□□□ -1.12
TRA2B-201ENST00000259043 FITM1A5D6W6 292 aa8.04□□□□□ -1.12
TRA2B-201ENST00000259043 CTSKP43235 329 aa8.04□□□□□ -1.12
TRA2B-201ENST00000259043 NR0B2Q15466 257 aa8.04□□□□□ -1.12
TRA2B-201ENST00000259043 TIGD5Q53EQ6 642 aa8.04□□□□□ -1.12
TRA2B-201ENST00000259043 ZNF605Q86T29 641 aa8.04□□□□□ -1.12
TRA2B-201ENST00000259043 CHST7Q9NS84 486 aa8.04□□□□□ -1.12
TRA2B-201ENST00000259043 GFOD1Q9NXC2 390 aa8.04□□□□□ -1.12
TRA2B-201ENST00000259043 TCFL5Q9UL49 500 aa8.04□□□□□ -1.12
TRA2B-201ENST00000259043 JAG2Q9Y219 1238 aa8.04□□□□□ -1.12
TRA2B-201ENST00000259043 PCDHB12Q9Y5F1 795 aa8.04□□□□□ -1.12
TRA2B-201ENST00000259043 NOTOA8MTQ0 251 aa8.03□□□□□ -1.12
TRA2B-201ENST00000259043 FOXD2O60548 495 aaPredicted RBP8.03□□□□□ -1.12
TRA2B-201ENST00000259043 ANKRD39Q53RE8 183 aa8.03□□□□□ -1.12
TRA2B-201ENST00000259043 AXDND1Q5T1B0 1012 aaPredicted RBP8.03□□□□□ -1.12
TRA2B-201ENST00000259043 TDRD10Q5VZ19 366 aaKnown RBP8.03□□□□□ -1.12
TRA2B-201ENST00000259043 C7orf61Q8IZ16 206 aa8.03□□□□□ -1.12
TRA2B-201ENST00000259043 DHX38Q92620 1227 aaKnown RBP8.03□□□□□ -1.12
TRA2B-201ENST00000259043 SHDQ96IW2 340 aa8.03□□□□□ -1.12
TRA2B-201ENST00000259043 SRRTQ9BXP5 876 aaKnown RBP8.03□□□□□ -1.12
TRA2B-201ENST00000259043 ZNF214Q9UL59 606 aaPredicted RBP8.03□□□□□ -1.12
TRA2B-201ENST00000259043 CNOT6Q9ULM6 557 aaKnown RBP8.03□□□□□ -1.12
TRA2B-201ENST00000259043 A0A0G2JLL6 359 aaPredicted RBP8.02□□□□□ -1.13
TRA2B-201ENST00000259043 TEX51A0A1B0GUA7 166 aa8.02□□□□□ -1.13
TRA2B-201ENST00000259043 NASPP49321 788 aaPredicted RBP8.02□□□□□ -1.13
TRA2B-201ENST00000259043 EIF6P56537 245 aaKnown RBP8.02□□□□□ -1.13
TRA2B-201ENST00000259043 PCBP3P57721 371 aaKnown RBP8.02□□□□□ -1.13
TRA2B-201ENST00000259043 SMARCC1Q92922 1105 aaPredicted RBP8.02□□□□□ -1.13
TRA2B-201ENST00000259043 INTS4Q96HW7 963 aaKnown RBP8.02□□□□□ -1.13
TRA2B-201ENST00000259043 KCNC2Q96PR1 638 aa8.02□□□□□ -1.13
TRA2B-201ENST00000259043 ZNF552Q9H707 407 aaPredicted RBP8.02□□□□□ -1.13
TRA2B-201ENST00000259043 YBX2Q9Y2T7 364 aaKnown RBP8.02□□□□□ -1.13
TRA2B-201ENST00000259043 SCRIBQ14160 1630 aa8.02□□□□□ -1.13
TRA2B-201ENST00000259043 EFEMP2O95967 443 aa8.01□□□□□ -1.13
TRA2B-201ENST00000259043 SYPP08247 313 aa8.01□□□□□ -1.13
TRA2B-201ENST00000259043 DUSP4Q13115 394 aa8.01□□□□□ -1.13
TRA2B-201ENST00000259043 ZNF385BQ569K4 471 aa8.01□□□□□ -1.13
TRA2B-201ENST00000259043 TCERG1LQ5VWI1 586 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms