RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 TTC38Q5R3I4 469 aa31.65■■■□□ 2.66
CCM2-201ENST00000258781 DNAJC25Q9H1X3 360 aa31.65■■■□□ 2.66
CCM2-201ENST00000258781 KIAA1468Q9P260 1216 aa31.65■■■□□ 2.66
CCM2-201ENST00000258781 SCAF8Q9UPN6 1271 aaKnown RBP31.65■■■□□ 2.66
CCM2-201ENST00000258781 USP17L5A8MUK1 530 aa31.65■■■□□ 2.66
CCM2-201ENST00000258781 KIF4BQ2VIQ3 1234 aa31.65■■■□□ 2.66
CCM2-201ENST00000258781 FKBP1CQ5VVH2 108 aa31.65■■■□□ 2.66
CCM2-201ENST00000258781 RASGRP2Q7LDG7 609 aa31.65■■■□□ 2.66
CCM2-201ENST00000258781 FOXP4Q8IVH2 680 aaPredicted RBP31.65■■■□□ 2.66
CCM2-201ENST00000258781 RRP36Q96EU6 259 aaKnown RBP31.65■■■□□ 2.66
CCM2-201ENST00000258781 FAM13BQ9NYF5 915 aa31.65■■■□□ 2.66
CCM2-201ENST00000258781 ZNF165P49910 485 aa31.64■■■□□ 2.66
CCM2-201ENST00000258781 HEATR3Q7Z4Q2 680 aa31.64■■■□□ 2.66
CCM2-201ENST00000258781 CDAN1Q8IWY9 1227 aa31.64■■■□□ 2.66
CCM2-201ENST00000258781 FAM151AQ8WW52 585 aa31.64■■■□□ 2.66
CCM2-201ENST00000258781 KCNH3Q9ULD8 1083 aa31.64■■■□□ 2.66
CCM2-201ENST00000258781 METTL16Q86W50 562 aaKnown RBP31.63■■■□□ 2.65
CCM2-201ENST00000258781 CCDC12Q8WUD4 166 aaPredicted RBP31.63■■■□□ 2.65
CCM2-201ENST00000258781 CLIP2Q9UDT6 1046 aa31.63■■■□□ 2.65
CCM2-201ENST00000258781 TYW1BQ6NUM6 668 aa31.63■■■□□ 2.65
CCM2-201ENST00000258781 PIK3AP1Q6ZUJ8 805 aa31.63■■■□□ 2.65
CCM2-201ENST00000258781 LRRC47Q8N1G4 583 aaKnown RBP31.63■■■□□ 2.65
CCM2-201ENST00000258781 FERMT2Q96AC1 680 aa31.63■■■□□ 2.65
CCM2-201ENST00000258781 CSRNP1Q96S65 589 aa31.63■■■□□ 2.65
CCM2-201ENST00000258781 TMEM39BQ9GZU3 492 aa31.63■■■□□ 2.65
CCM2-201ENST00000258781 RIOX1Q9H6W3 641 aa31.63■■■□□ 2.65
CCM2-201ENST00000258781 M0R2N6 131 aa31.62■■■□□ 2.65
CCM2-201ENST00000258781 EPS15P42566 896 aa31.62■■■□□ 2.65
CCM2-201ENST00000258781 NOM1Q5C9Z4 860 aaKnown RBP31.62■■■□□ 2.65
CCM2-201ENST00000258781 ELOA2Q8IYF1 753 aaPredicted RBP31.62■■■□□ 2.65
CCM2-201ENST00000258781 TRPM4Q8TD43 1214 aa31.62■■■□□ 2.65
CCM2-201ENST00000258781 SEC63Q9UGP8 760 aaKnown RBP31.62■■■□□ 2.65
CCM2-201ENST00000258781 H7C1D1 291 aa31.61■■■□□ 2.65
CCM2-201ENST00000258781 TATDN1Q6P1N9 297 aa31.61■■■□□ 2.65
CCM2-201ENST00000258781 LUZP1Q86V48 1076 aa31.61■■■□□ 2.65
CCM2-201ENST00000258781 TRIM34Q9BYJ4 488 aa31.61■■■□□ 2.65
CCM2-201ENST00000258781 hCG_1984214I3L0E3 225 aa31.61■■■□□ 2.65
CCM2-201ENST00000258781 MPHOSPH10O00566 681 aaKnown RBP31.61■■■□□ 2.65
CCM2-201ENST00000258781 ADCY5O95622 1261 aa31.61■■■□□ 2.65
CCM2-201ENST00000258781 FAM83AQ86UY5 434 aa31.61■■■□□ 2.65
CCM2-201ENST00000258781 ZNF713Q8N859 430 aaPredicted RBP31.61■■■□□ 2.65
CCM2-201ENST00000258781 GRIN1Q05586 938 aa31.6■■■□□ 2.65
CCM2-201ENST00000258781 CLEC10AQ8IUN9 316 aa31.6■■■□□ 2.65
CCM2-201ENST00000258781 ATP2C1P98194 919 aaPredicted RBP31.59■■■□□ 2.65
CCM2-201ENST00000258781 CERKLQ49MI3 558 aaPredicted RBP31.59■■■□□ 2.65
CCM2-201ENST00000258781 ZMYND12Q9H0C1 365 aa31.59■■■□□ 2.65
CCM2-201ENST00000258781 CPVLQ9H3G5 476 aa31.59■■■□□ 2.65
CCM2-201ENST00000258781 GRIN3BO60391 1043 aa31.59■■■□□ 2.65
CCM2-201ENST00000258781 ZNF543Q08ER8 600 aa31.59■■■□□ 2.65
CCM2-201ENST00000258781 KRBA2Q6ZNG9 492 aa31.59■■■□□ 2.65
CCM2-201ENST00000258781 C11orf57Q6ZUT1 292 aaPredicted RBP31.59■■■□□ 2.65
CCM2-201ENST00000258781 PGAP2Q9UHJ9 254 aa31.59■■■□□ 2.65
CCM2-201ENST00000258781 HACL1Q9UJ83 578 aa31.59■■■□□ 2.65
CCM2-201ENST00000258781 WNT7AO00755 349 aa31.58■■■□□ 2.65
CCM2-201ENST00000258781 ADAMTS3O15072 1205 aa31.58■■■□□ 2.65
CCM2-201ENST00000258781 ZRSR1Q15695 479 aaKnown RBP31.58■■■□□ 2.65
CCM2-201ENST00000258781 ZNF174Q15697 407 aa31.58■■■□□ 2.65
CCM2-201ENST00000258781 CEP57L1Q8IYX8 460 aa31.58■■■□□ 2.65
CCM2-201ENST00000258781 CCDC39Q9UFE4 941 aa31.58■■■□□ 2.65
CCM2-201ENST00000258781 NAPAP54920 295 aa31.57■■■□□ 2.64
CCM2-201ENST00000258781 IQCB1Q15051 598 aa31.57■■■□□ 2.64
CCM2-201ENST00000258781 CSRNP2Q9H175 543 aa31.57■■■□□ 2.64
CCM2-201ENST00000258781 NYAP2Q9P242 653 aa31.57■■■□□ 2.64
CCM2-201ENST00000258781 PCDHA6Q9UN73 950 aa31.57■■■□□ 2.64
CCM2-201ENST00000258781 PCDHA8Q9Y5H6 950 aa31.57■■■□□ 2.64
CCM2-201ENST00000258781 CCDC194A0A1B0GVG4 234 aa31.57■■■□□ 2.64
CCM2-201ENST00000258781 GPATCH4Q5T3I0 446 aaKnown RBP31.57■■■□□ 2.64
CCM2-201ENST00000258781 MKL1Q969V6 931 aa31.57■■■□□ 2.64
CCM2-201ENST00000258781 PIGSQ96S52 555 aa31.57■■■□□ 2.64
CCM2-201ENST00000258781 NAT10Q9H0A0 1025 aaKnown RBP31.57■■■□□ 2.64
CCM2-201ENST00000258781 KANSL2Q9H9L4 492 aa31.57■■■□□ 2.64
CCM2-201ENST00000258781 FRMPD2Q68DX3 1309 aaPredicted RBP31.57■■■□□ 2.64
CCM2-201ENST00000258781 HIRAP54198 1017 aaPredicted RBP31.56■■■□□ 2.64
CCM2-201ENST00000258781 RASA3Q14644 834 aa31.56■■■□□ 2.64
CCM2-201ENST00000258781 SHROOM1Q2M3G4 852 aaPredicted RBP31.56■■■□□ 2.64
CCM2-201ENST00000258781 HOMER1Q86YM7 354 aa31.56■■■□□ 2.64
CCM2-201ENST00000258781 ERCC4Q92889 916 aaPredicted RBP31.56■■■□□ 2.64
CCM2-201ENST00000258781 TUBE1Q9UJT0 475 aa31.56■■■□□ 2.64
CCM2-201ENST00000258781 ESYT2A0FGR8 921 aa31.55■■■□□ 2.64
CCM2-201ENST00000258781 ESPNB1AK53 854 aa31.55■■■□□ 2.64
CCM2-201ENST00000258781 LONRF3Q496Y0 759 aa31.55■■■□□ 2.64
CCM2-201ENST00000258781 SPECC1Q5M775 1068 aa31.55■■■□□ 2.64
CCM2-201ENST00000258781 CNNM3Q8NE01 707 aa31.55■■■□□ 2.64
CCM2-201ENST00000258781 UBA5Q9GZZ9 404 aa31.55■■■□□ 2.64
CCM2-201ENST00000258781 C6orf50Q9HD87 102 aa31.55■■■□□ 2.64
CCM2-201ENST00000258781 HOOK1Q9UJC3 728 aaKnown RBP31.55■■■□□ 2.64
CCM2-201ENST00000258781 POLR2AP24928 1970 aaKnown RBP31.55■■■□□ 2.64
CCM2-201ENST00000258781 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP31.55■■■□□ 2.64
CCM2-201ENST00000258781 GNA11P29992 359 aa31.55■■■□□ 2.64
CCM2-201ENST00000258781 PTGDRQ13258 359 aa31.55■■■□□ 2.64
CCM2-201ENST00000258781 TMEM179Q6ZVK1 233 aa31.55■■■□□ 2.64
CCM2-201ENST00000258781 AP5Z1O43299 807 aa31.54■■■□□ 2.64
CCM2-201ENST00000258781 NLRP12P59046 1061 aa31.54■■■□□ 2.64
CCM2-201ENST00000258781 VAT1LQ9HCJ6 419 aa31.54■■■□□ 2.64
CCM2-201ENST00000258781 TNNI2P48788 182 aa31.52■■■□□ 2.64
CCM2-201ENST00000258781 TNFAIP1Q13829 316 aa31.52■■■□□ 2.64
CCM2-201ENST00000258781 RRP1BQ14684 758 aaKnown RBP31.52■■■□□ 2.64
CCM2-201ENST00000258781 ANGEL2Q5VTE6 544 aaKnown RBP31.52■■■□□ 2.64
CCM2-201ENST00000258781 KRT25Q7Z3Z0 450 aa31.52■■■□□ 2.64
CCM2-201ENST00000258781 RASGRP4Q8TDF6 673 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms