RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 USP5P45974 858 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 RASSF7Q02833 373 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 LRCH2Q5VUJ6 765 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 TRIML1Q8N9V2 468 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 SDR42E1Q8WUS8 393 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 HNRNPLLQ8WVV9 542 aaKnown RBP13.73□□□□□ -0.21
USP30-201ENST00000257548 KRT23Q9C075 422 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 A0A1B0GTH6 734 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 ANKRD18BA2A2Z9 1011 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 NEDD9Q14511 834 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 TCERG1LQ5VWI1 586 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 RASGRP2Q7LDG7 609 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 MB21D2Q8IYB1 491 aaPredicted RBP13.73□□□□□ -0.21
USP30-201ENST00000257548 ARL8AQ96BM9 186 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 ADD3Q9UEY8 706 aaKnown RBP13.73□□□□□ -0.21
USP30-201ENST00000257548 DMGDHQ9UI17 866 aaKnown RBP13.73□□□□□ -0.21
USP30-201ENST00000257548 BAZ2BQ9UIF8 2168 aaKnown RBP13.73□□□□□ -0.21
USP30-201ENST00000257548 UBN2Q6ZU65 1347 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 HEXIM1O94992 359 aaKnown RBP13.73□□□□□ -0.21
USP30-201ENST00000257548 FTCDO95954 541 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 MMP1P03956 469 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 TEX2Q8IWB9 1127 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 IFT20Q8IY31 132 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 ZNF654Q8IZM8 581 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 HDAC7Q8WUI4 952 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 TCP11L1Q9NUJ3 509 aa13.73□□□□□ -0.21
USP30-201ENST00000257548 C3P01024 1663 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 EHHADHQ08426 723 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 DYMQ7RTS9 669 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 KRT28Q7Z3Y7 464 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 FANCBQ8NB91 859 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 UBA5Q9GZZ9 404 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 GOLGA8KD6RF30 607 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 EVA1CP58658 441 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 KRT71Q3SY84 523 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 SYNE4Q8N205 404 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 NHEJ1Q9H9Q4 299 aaPredicted RBP13.72□□□□□ -0.21
USP30-201ENST00000257548 AGPAT5Q9NUQ2 364 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 STX8Q9UNK0 236 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 GOLGA6L10A0A0M3HER8 536 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 CEP104O60308 925 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 SKAP2O75563 359 aaPredicted RBP13.72□□□□□ -0.21
USP30-201ENST00000257548 MYBL2P10244 700 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 SCP2P22307 547 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 CTNNA1P35221 906 aaKnown RBP13.72□□□□□ -0.21
USP30-201ENST00000257548 TMEM139Q8IV31 216 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 ESR2Q92731 530 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 TUBGCP2Q9BSJ2 902 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 STK38LQ9Y2H1 464 aa13.72□□□□□ -0.21
USP30-201ENST00000257548 TSPY2A6NKD2 308 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 GCOM1H8Y6P7 765 aaPredicted RBP13.71□□□□□ -0.21
USP30-201ENST00000257548 SH2B2O14492 632 aaPredicted RBP13.71□□□□□ -0.21
USP30-201ENST00000257548 MYZAPP0CAP1 466 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 TRIM14Q14142 442 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 NAA35Q5VZE5 725 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 HIBCHQ6NVY1 386 aaPredicted RBP13.71□□□□□ -0.21
USP30-201ENST00000257548 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.21
USP30-201ENST00000257548 DTHD1Q6ZMT9 781 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 HEATR3Q7Z4Q2 680 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 PLBD2Q8NHP8 589 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 HSD3B7Q9H2F3 369 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 RNF41Q9H4P4 317 aaPredicted RBP13.71□□□□□ -0.21
USP30-201ENST00000257548 PACSIN2Q9UNF0 486 aaPredicted RBP13.71□□□□□ -0.21
USP30-201ENST00000257548 NR1D1P20393 614 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 IFNAR2P48551 515 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 RAPGEF1Q13905 1077 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 TCP11X2Q5H9J9 407 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 MSANTD4Q8NCY6 345 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 RSRC1Q96IZ7 334 aaKnown RBP13.71□□□□□ -0.21
USP30-201ENST00000257548 MS4A14Q96JA4 679 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 GSDMAQ96QA5 445 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 LACRTQ9GZZ8 138 aa13.71□□□□□ -0.21
USP30-201ENST00000257548 UBR1Q8IWV7 1749 aa13.71□□□□□ -0.22
USP30-201ENST00000257548 RPN1P04843 607 aaKnown RBP13.71□□□□□ -0.22
USP30-201ENST00000257548 PDE6AP16499 860 aa13.71□□□□□ -0.22
USP30-201ENST00000257548 PTPAQ15257 358 aa13.71□□□□□ -0.22
USP30-201ENST00000257548 AMOTL1Q8IY63 956 aa13.71□□□□□ -0.22
USP30-201ENST00000257548 ARFGAP2Q8N6H7 521 aa13.71□□□□□ -0.22
USP30-201ENST00000257548 CNNM2Q9H8M5 875 aa13.71□□□□□ -0.22
USP30-201ENST00000257548 SRPRBQ9Y5M8 271 aaKnown RBP13.71□□□□□ -0.22
USP30-201ENST00000257548 PHKA1P46020 1223 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 AKNAD1Q5T1N1 836 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 CCNI2Q6ZMN8 369 aaPredicted RBP13.7□□□□□ -0.22
USP30-201ENST00000257548 CCDC25Q86WR0 208 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 IFNL3Q8IZI9 196 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 TRIM58Q8NG06 486 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 DPH5Q9H2P9 285 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 DIP2AQ14689 1571 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 EIF3HO15372 352 aaKnown RBP eCLIP13.7□□□□□ -0.22
USP30-201ENST00000257548 ITGA6P23229 1130 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 SARNPP82979 210 aaKnown RBP13.7□□□□□ -0.22
USP30-201ENST00000257548 PAK2Q13177 524 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 SNCBQ16143 134 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 CFAP221Q4G0U5 840 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 RPGRIP1Q96KN7 1286 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 SLC52A2Q9HAB3 445 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 TBC1D7Q9P0N9 293 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 MYO1AQ9UBC5 1043 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 NEDD4P46934 1319 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms