RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 ZNF287Q9HBT7 754 aa11.25□□□□□ -0.61
TRPM1-201ENST00000256552 NLRC4Q9NPP4 1024 aa11.25□□□□□ -0.61
TRPM1-201ENST00000256552 CTTNBP2NLQ9P2B4 639 aa11.25□□□□□ -0.61
TRPM1-201ENST00000256552 SKIP12755 728 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 EEF2P13639 858 aaKnown RBP11.24□□□□□ -0.61
TRPM1-201ENST00000256552 DCAF17Q5H9S7 520 aaPredicted RBP11.24□□□□□ -0.61
TRPM1-201ENST00000256552 EMBQ6PCB8 327 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 XAGE3Q8WTP9 111 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 KRT15P19012 456 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 DNM2P50570 870 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 CCDC105Q8IYK2 499 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 MORC4Q8TE76 937 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 MPHOSPH6Q99547 160 aaKnown RBP11.24□□□□□ -0.61
TRPM1-201ENST00000256552 ZNF446Q9NWS9 450 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 NCOA3Q9Y6Q9 1424 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 PDHA1P08559 390 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 TROVE2P10155 538 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRPM1-201ENST00000256552 RBM5P52756 815 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRPM1-201ENST00000256552 TNNI3KQ59H18 835 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 TTC38Q5R3I4 469 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 CCDC84Q86UT8 332 aaPredicted RBP11.24□□□□□ -0.61
TRPM1-201ENST00000256552 SYCE1Q8N0S2 351 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 FPGT-TNNI3KV9GXZ4 949 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 SPOPO43791 374 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 SRGAP2O75044 1071 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 ZNF189O75820 626 aaPredicted RBP11.24□□□□□ -0.61
TRPM1-201ENST00000256552 SMTNP53814 917 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 PIK3AP1Q6ZUJ8 805 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 UBL4BQ8N7F7 174 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 LINC00301Q8NCQ3 95 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 EPSTI1Q96J88 318 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 DBNDD2Q9BQY9 259 aa11.24□□□□□ -0.61
TRPM1-201ENST00000256552 NYAP1Q6ZVC0 841 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 SV2BQ7L1I2 683 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 LRRC43Q8N309 656 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 KCNV2Q8TDN2 545 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 C17orf50Q8WW18 174 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 MAP4K1Q92918 833 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 EDC3Q96F86 508 aaKnown RBP11.23□□□□□ -0.61
TRPM1-201ENST00000256552 TMEM87BQ96K49 555 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 UIMC1Q96RL1 719 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 CNOT10Q9H9A5 744 aaKnown RBP11.23□□□□□ -0.61
TRPM1-201ENST00000256552 SLC40A1Q9NP59 571 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 PARP2Q9UGN5 583 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 CHMP2AO43633 222 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 SKAP2O75563 359 aaPredicted RBP11.23□□□□□ -0.61
TRPM1-201ENST00000256552 ERCC5P28715 1186 aaPredicted RBP11.23□□□□□ -0.61
TRPM1-201ENST00000256552 PDE4BQ07343 736 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 COPS6Q7L5N1 327 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 KSR1Q8IVT5 923 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 CFAP61Q8NHU2 1237 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 IQCDQ96DY2 449 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 SLC39A14Q15043 492 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 KRT79Q5XKE5 535 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 FAM81AQ8TBF8 368 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 SSH3Q8TE77 659 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 UTP6Q9NYH9 597 aaKnown RBP11.23□□□□□ -0.61
TRPM1-201ENST00000256552 NFU1Q9UMS0 254 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 GNAT1P11488 350 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 EHHADHQ08426 723 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 NSUN7Q8NE18 718 aaKnown RBP11.23□□□□□ -0.61
TRPM1-201ENST00000256552 FBXO41Q8TF61 875 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 VIPAS39Q9H9C1 493 aa11.23□□□□□ -0.61
TRPM1-201ENST00000256552 EIF3HO15372 352 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRPM1-201ENST00000256552 UQCRFS1P1P0C7P4 283 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 CLUL1Q15846 466 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 LZICQ8WZA0 190 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 GOLPH3LQ9H4A5 285 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 L2HGDHQ9H9P8 463 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 XAB2Q9HCS7 855 aaKnown RBP11.22□□□□□ -0.61
TRPM1-201ENST00000256552 HAUS2Q9NVX0 235 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 MAN1B1Q9UKM7 699 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 DNMBPQ6XZF7 1577 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 N4BP1O75113 896 aaKnown RBP11.22□□□□□ -0.61
TRPM1-201ENST00000256552 NDUFA10O95299 355 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 CALM1P0DP23 149 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 CALM2P0DP24 149 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 CALM3P0DP25 149 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRPM1-201ENST00000256552 RINLQ6ZS11 566 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 CCDC13Q8IYE1 715 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 COG1Q8WTW3 980 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 HAUS8Q9BT25 410 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 MIS12Q9H081 205 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 RPS6KA5O75582 802 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 RPS6KA3P51812 740 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 RASSF7Q02833 373 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 CAVIN4Q5BKX8 364 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 ARHGEF25Q86VW2 580 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 ARL10Q8N8L6 244 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 TNFAIP3P21580 790 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 PDIA3P30101 505 aaKnown RBP11.22□□□□□ -0.61
TRPM1-201ENST00000256552 IL13P35225 146 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 FNBP4Q8N3X1 1017 aaPredicted RBP11.22□□□□□ -0.61
TRPM1-201ENST00000256552 AFAP1L2Q8N4X5 818 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 ENOX1Q8TC92 643 aaKnown RBP11.22□□□□□ -0.61
TRPM1-201ENST00000256552 ZKSCAN4Q969J2 545 aaPredicted RBP11.22□□□□□ -0.61
TRPM1-201ENST00000256552 ITGB1BP2Q9UKP3 347 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 PLAAQ9Y263 795 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms