RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 NUDT12Q9BQG2 462 aa25.32■■□□□ 1.64
NXT1-201ENST00000254998 ISY1Q9ULR0 285 aaKnown RBP25.32■■□□□ 1.64
NXT1-201ENST00000254998 SLC15A5A6NIM6 579 aa25.31■■□□□ 1.64
NXT1-201ENST00000254998 ERCC3P19447 782 aa25.31■■□□□ 1.64
NXT1-201ENST00000254998 STAT3P40763 770 aa25.31■■□□□ 1.64
NXT1-201ENST00000254998 OAZ1P54368 228 aa25.31■■□□□ 1.64
NXT1-201ENST00000254998 ANTXR2P58335 489 aa25.31■■□□□ 1.64
NXT1-201ENST00000254998 ZNF543Q08ER8 600 aa25.31■■□□□ 1.64
NXT1-201ENST00000254998 PLS1Q14651 629 aa25.31■■□□□ 1.64
NXT1-201ENST00000254998 SART3Q15020 963 aaKnown RBP25.31■■□□□ 1.64
NXT1-201ENST00000254998 IFIT1BQ5T764 474 aaKnown RBP25.31■■□□□ 1.64
NXT1-201ENST00000254998 NBPF11Q86T75 865 aa25.31■■□□□ 1.64
NXT1-201ENST00000254998 SLAIN1Q8ND83 568 aa25.31■■□□□ 1.64
NXT1-201ENST00000254998 KCNB2Q92953 911 aa25.31■■□□□ 1.64
NXT1-201ENST00000254998 TEX13BQ9BXU2 312 aa25.31■■□□□ 1.64
NXT1-201ENST00000254998 CWC22Q9HCG8 908 aaKnown RBP25.31■■□□□ 1.64
NXT1-201ENST00000254998 MTMR7Q9Y216 660 aa25.31■■□□□ 1.64
NXT1-201ENST00000254998 IFIT3O14879 490 aaKnown RBP25.3■■□□□ 1.64
NXT1-201ENST00000254998 STRNO43815 780 aa25.3■■□□□ 1.64
NXT1-201ENST00000254998 PTPREP23469 700 aa25.3■■□□□ 1.64
NXT1-201ENST00000254998 GRK4P32298 578 aa25.3■■□□□ 1.64
NXT1-201ENST00000254998 IKQ13123 557 aaPredicted RBP25.3■■□□□ 1.64
NXT1-201ENST00000254998 GPATCH4Q5T3I0 446 aaKnown RBP25.3■■□□□ 1.64
NXT1-201ENST00000254998 IVNS1ABPQ9Y6Y0 642 aa25.3■■□□□ 1.64
NXT1-201ENST00000254998 ERICH2A1L162 156 aa25.29■■□□□ 1.64
NXT1-201ENST00000254998 ADCY3O60266 1144 aa25.29■■□□□ 1.64
NXT1-201ENST00000254998 XRCC5P13010 732 aaKnown RBP25.29■■□□□ 1.64
NXT1-201ENST00000254998 GRB14Q14449 540 aa25.29■■□□□ 1.64
NXT1-201ENST00000254998 IFFO2Q5TF58 517 aa25.29■■□□□ 1.64
NXT1-201ENST00000254998 ABRAQ8N0Z2 381 aa25.29■■□□□ 1.64
NXT1-201ENST00000254998 CHMP4CQ96CF2 233 aa25.29■■□□□ 1.64
NXT1-201ENST00000254998 ZNF333Q96JL9 665 aa25.29■■□□□ 1.64
NXT1-201ENST00000254998 PRR12Q9ULL5 1215 aa25.29■■□□□ 1.64
NXT1-201ENST00000254998 CTDP1Q9Y5B0 961 aaPredicted RBP25.29■■□□□ 1.64
NXT1-201ENST00000254998 ZNF236Q9UL36 1845 aa25.28■■□□□ 1.64
NXT1-201ENST00000254998 ZKSCAN1P17029 563 aaPredicted RBP25.28■■□□□ 1.64
NXT1-201ENST00000254998 MCM5P33992 734 aa25.28■■□□□ 1.64
NXT1-201ENST00000254998 RGS2P41220 211 aa25.28■■□□□ 1.64
NXT1-201ENST00000254998 WDR78Q5VTH9 848 aa25.28■■□□□ 1.64
NXT1-201ENST00000254998 TTBK2Q6IQ55 1244 aa25.28■■□□□ 1.64
NXT1-201ENST00000254998 NCAPG2Q86XI2 1143 aa25.28■■□□□ 1.64
NXT1-201ENST00000254998 IGDCC4Q8TDY8 1250 aa25.28■■□□□ 1.64
NXT1-201ENST00000254998 CCDC85CA6NKD9 419 aa25.27■■□□□ 1.64
NXT1-201ENST00000254998 HSPA4P34932 840 aa25.27■■□□□ 1.64
NXT1-201ENST00000254998 MAP2K5Q13163 448 aa25.27■■□□□ 1.64
NXT1-201ENST00000254998 KRT32Q14532 448 aa25.27■■□□□ 1.64
NXT1-201ENST00000254998 WTAPQ15007 396 aa25.27■■□□□ 1.64
NXT1-201ENST00000254998 ASPRV1Q53RT3 343 aa25.27■■□□□ 1.64
NXT1-201ENST00000254998 TMEM67Q5HYA8 995 aa25.27■■□□□ 1.64
NXT1-201ENST00000254998 SYDE2Q5VT97 1194 aa25.27■■□□□ 1.64
NXT1-201ENST00000254998 SNRNP48Q6IEG0 339 aaKnown RBP25.27■■□□□ 1.64
NXT1-201ENST00000254998 RASEFQ8IZ41 740 aa25.27■■□□□ 1.64
NXT1-201ENST00000254998 SH3TC2Q8TF17 1288 aa25.27■■□□□ 1.64
NXT1-201ENST00000254998 GPCPD1Q9NPB8 672 aa25.27■■□□□ 1.64
NXT1-201ENST00000254998 FRMPD2Q68DX3 1309 aaPredicted RBP25.27■■□□□ 1.64
NXT1-201ENST00000254998 PRC1O43663 620 aa25.26■■□□□ 1.63
NXT1-201ENST00000254998 HOXC6P09630 235 aa25.26■■□□□ 1.63
NXT1-201ENST00000254998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.26■■□□□ 1.63
NXT1-201ENST00000254998 CHST3Q7LGC8 479 aa25.26■■□□□ 1.63
NXT1-201ENST00000254998 TRMT44Q8IYL2 757 aaKnown RBP25.26■■□□□ 1.63
NXT1-201ENST00000254998 TMEM87BQ96K49 555 aa25.26■■□□□ 1.63
NXT1-201ENST00000254998 APBA2Q99767 749 aa25.26■■□□□ 1.63
NXT1-201ENST00000254998 RANBP17Q9H2T7 1088 aaKnown RBP25.25■■□□□ 1.63
NXT1-201ENST00000254998 RAVER2Q9HCJ3 691 aaKnown RBP25.25■■□□□ 1.63
NXT1-201ENST00000254998 WDR19Q8NEZ3 1342 aa25.25■■□□□ 1.63
NXT1-201ENST00000254998 ZNF536O15090 1300 aa25.24■■□□□ 1.63
NXT1-201ENST00000254998 FCER1AP12319 257 aa25.24■■□□□ 1.63
NXT1-201ENST00000254998 ELNP15502 786 aa25.24■■□□□ 1.63
NXT1-201ENST00000254998 CYP2B6P20813 491 aa25.24■■□□□ 1.63
NXT1-201ENST00000254998 SLC16A2P36021 539 aa25.24■■□□□ 1.63
NXT1-201ENST00000254998 COL9A3Q14050 684 aaPredicted RBP25.24■■□□□ 1.63
NXT1-201ENST00000254998 CPXCR1Q8N123 301 aa25.24■■□□□ 1.63
NXT1-201ENST00000254998 TMTC2Q8N394 836 aa25.24■■□□□ 1.63
NXT1-201ENST00000254998 NEK1Q96PY6 1258 aa25.24■■□□□ 1.63
NXT1-201ENST00000254998 LY9Q9HBG7 655 aa25.24■■□□□ 1.63
NXT1-201ENST00000254998 SENP2Q9HC62 589 aa25.24■■□□□ 1.63
NXT1-201ENST00000254998 PARP1P09874 1014 aaKnown RBP25.23■■□□□ 1.63
NXT1-201ENST00000254998 ADORA2AP29274 412 aa25.23■■□□□ 1.63
NXT1-201ENST00000254998 TKFCQ3LXA3 575 aa25.23■■□□□ 1.63
NXT1-201ENST00000254998 CHST13Q8NET6 341 aa25.23■■□□□ 1.63
NXT1-201ENST00000254998 RIPK3Q9Y572 518 aa25.23■■□□□ 1.63
NXT1-201ENST00000254998 KIAA0100Q14667 2235 aaKnown RBP25.22■■□□□ 1.63
NXT1-201ENST00000254998 SH2B2O14492 632 aaPredicted RBP25.22■■□□□ 1.63
NXT1-201ENST00000254998 HMGCRP04035 888 aa25.22■■□□□ 1.63
NXT1-201ENST00000254998 HMGB1P09429 215 aaKnown RBP25.22■■□□□ 1.63
NXT1-201ENST00000254998 GOLGA8HP0CJ92 632 aa25.22■■□□□ 1.63
NXT1-201ENST00000254998 LIFRP42702 1097 aa25.22■■□□□ 1.63
NXT1-201ENST00000254998 UBXN2AP68543 259 aa25.22■■□□□ 1.63
NXT1-201ENST00000254998 ADCK5Q3MIX3 580 aa25.22■■□□□ 1.63
NXT1-201ENST00000254998 USP26Q9BXU7 913 aa25.22■■□□□ 1.63
NXT1-201ENST00000254998 FBXO40Q9UH90 709 aa25.22■■□□□ 1.63
NXT1-201ENST00000254998 PNMA2Q9UL42 364 aa25.22■■□□□ 1.63
NXT1-201ENST00000254998 INHAP05111 366 aa25.21■■□□□ 1.63
NXT1-201ENST00000254998 ICAM1P05362 532 aa25.21■■□□□ 1.63
NXT1-201ENST00000254998 EXOSC10Q01780 885 aaKnown RBP25.21■■□□□ 1.63
NXT1-201ENST00000254998 TROAPQ12815 778 aa25.21■■□□□ 1.63
NXT1-201ENST00000254998 GRM4Q14833 912 aa25.21■■□□□ 1.63
NXT1-201ENST00000254998 DHX32Q7L7V1 743 aaKnown RBP25.21■■□□□ 1.63
NXT1-201ENST00000254998 CATIPQ7Z7H3 387 aa25.21■■□□□ 1.63
NXT1-201ENST00000254998 TRIB2Q92519 343 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms