RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 FXR1P51114 621 aaKnown RBP eCLIP10.43□□□□□ -0.74
RPA1-201ENST00000254719 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
RPA1-201ENST00000254719 DPY19L2P1Q6NXN4 242 aa10.43□□□□□ -0.74
RPA1-201ENST00000254719 ANKRD18AQ8IVF6 992 aa10.43□□□□□ -0.74
RPA1-201ENST00000254719 TTYH3Q9C0H2 523 aa10.43□□□□□ -0.74
RPA1-201ENST00000254719 RAI14Q9P0K7 980 aa10.43□□□□□ -0.74
RPA1-201ENST00000254719 IMPACTQ9P2X3 320 aa10.43□□□□□ -0.74
RPA1-201ENST00000254719 PCDHA6Q9UN73 950 aa10.43□□□□□ -0.74
RPA1-201ENST00000254719 PCDHA8Q9Y5H6 950 aa10.43□□□□□ -0.74
RPA1-201ENST00000254719 POLR3GO15318 223 aaPredicted RBP10.43□□□□□ -0.74
RPA1-201ENST00000254719 ZRANB2O95218 330 aaKnown RBP eCLIP10.43□□□□□ -0.74
RPA1-201ENST00000254719 PPP4CP60510 307 aa10.43□□□□□ -0.74
RPA1-201ENST00000254719 WWC2Q6AWC2 1192 aa10.43□□□□□ -0.74
RPA1-201ENST00000254719 RLFQ13129 1914 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 ERVK-24P63145 666 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 GPKOWQ92917 476 aaPredicted RBP eCLIP10.42□□□□□ -0.74
RPA1-201ENST00000254719 MXD3Q9BW11 206 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 LUC7LQ9NQ29 371 aaKnown RBP10.42□□□□□ -0.74
RPA1-201ENST00000254719 RGPD3A6NKT7 1758 aaPredicted RBP10.42□□□□□ -0.74
RPA1-201ENST00000254719 RGPD4Q7Z3J3 1758 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 SASH3O75995 380 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 PTGDRQ13258 359 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 HSP90B2PQ58FF3 399 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 WDR59Q6PJI9 974 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 CLEC10AQ8IUN9 316 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 ENOX1Q8TC92 643 aaKnown RBP10.42□□□□□ -0.74
RPA1-201ENST00000254719 FHOD1Q9Y613 1164 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 GAKO14976 1311 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 POLD1P28340 1107 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 ARHGAP25P42331 645 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 CCDC178Q5BJE1 867 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 ZNF507Q8TCN5 953 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 NUP133Q8WUM0 1156 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 C10orf71Q711Q0 1435 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 MKI67P46013 3256 aaKnown RBP10.42□□□□□ -0.74
RPA1-201ENST00000254719 ADKP55263 362 aaKnown RBP10.42□□□□□ -0.74
RPA1-201ENST00000254719 OLIG1Q8TAK6 271 aa10.42□□□□□ -0.74
RPA1-201ENST00000254719 CCDC66A2RUB6 948 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 POLRMTO00411 1230 aaKnown RBP10.41□□□□□ -0.74
RPA1-201ENST00000254719 TMC6Q7Z403 805 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 ZFPM1Q8IX07 1006 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 GLIS3Q8NEA6 775 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 CTCFLQ8NI51 663 aaPredicted RBP10.41□□□□□ -0.74
RPA1-201ENST00000254719 SLFN14P0C7P3 912 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 ATP2B1P20020 1258 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 SYCP1Q15431 976 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 SOGA3Q5TF21 947 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 NOC3LQ8WTT2 800 aaKnown RBP10.41□□□□□ -0.74
RPA1-201ENST00000254719 DUSP9Q99956 384 aaKnown RBP10.41□□□□□ -0.74
RPA1-201ENST00000254719 TCP11L1Q9NUJ3 509 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 TFR2Q9UP52 801 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 LCTP09848 1927 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 PLIN4Q96Q06 1357 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 ANKRD65E5RJM6 399 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 GNPATO15228 680 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 ERLIN1O75477 346 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 GYS2P54840 703 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 MYL5Q02045 173 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 EHHADHQ08426 723 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 CFAP100Q494V2 611 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 NUDT12Q9BQG2 462 aa10.41□□□□□ -0.74
RPA1-201ENST00000254719 SNHG28P0DPA3 235 aa10.4□□□□□ -0.74
RPA1-201ENST00000254719 CEP89Q96ST8 783 aa10.4□□□□□ -0.74
RPA1-201ENST00000254719 ZNF174Q15697 407 aa10.4□□□□□ -0.74
RPA1-201ENST00000254719 RILPL1Q5EBL4 403 aa10.4□□□□□ -0.74
RPA1-201ENST00000254719 CRYGNQ8WXF5 182 aa10.4□□□□□ -0.74
RPA1-201ENST00000254719 SMARCC1Q92922 1105 aaPredicted RBP10.4□□□□□ -0.74
RPA1-201ENST00000254719 CDK5RAP3Q96JB5 506 aa10.4□□□□□ -0.74
RPA1-201ENST00000254719 C8orf37Q96NL8 207 aa10.4□□□□□ -0.74
RPA1-201ENST00000254719 FGFBP2Q9BYJ0 223 aa10.4□□□□□ -0.74
RPA1-201ENST00000254719 BCAS3Q9H6U6 928 aa10.4□□□□□ -0.74
RPA1-201ENST00000254719 DDX41Q9UJV9 622 aaKnown RBP10.4□□□□□ -0.74
RPA1-201ENST00000254719 NFE2L3Q9Y4A8 694 aa10.4□□□□□ -0.74
RPA1-201ENST00000254719 MYH10P35580 1976 aa10.4□□□□□ -0.74
RPA1-201ENST00000254719 PSDA5PKW4 1024 aaPredicted RBP10.4□□□□□ -0.74
RPA1-201ENST00000254719 RCCD1A6NED2 376 aa10.4□□□□□ -0.74
RPA1-201ENST00000254719 CLK2P49760 499 aaKnown RBP10.4□□□□□ -0.74
RPA1-201ENST00000254719 CATIPQ7Z7H3 387 aa10.4□□□□□ -0.74
RPA1-201ENST00000254719 ZCCHC17Q9NP64 241 aaKnown RBP10.4□□□□□ -0.74
RPA1-201ENST00000254719 GPR75-ASB3A0A0A6YYF3 556 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 SOWAHDA6NJG2 315 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 HIBADHP31937 336 aaKnown RBP10.39□□□□□ -0.75
RPA1-201ENST00000254719 RRP1BQ14684 758 aaKnown RBP10.39□□□□□ -0.75
RPA1-201ENST00000254719 ELF2Q15723 593 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 UTP14CQ5TAP6 766 aaKnown RBP10.39□□□□□ -0.75
RPA1-201ENST00000254719 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.39□□□□□ -0.75
RPA1-201ENST00000254719 CNNM3Q8NE01 707 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 GTPBP4Q9BZE4 634 aaKnown RBP10.39□□□□□ -0.75
RPA1-201ENST00000254719 BLZF1Q9H2G9 400 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 GDAQ9Y2T3 454 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 SEMA3EO15041 775 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 SPTY2D1Q68D10 685 aaPredicted RBP10.39□□□□□ -0.75
RPA1-201ENST00000254719 FAM196AQ6ZSG2 479 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 FAM177A1Q8N128 213 aaPredicted RBP10.39□□□□□ -0.75
RPA1-201ENST00000254719 TMEM47Q9BQJ4 181 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 KBTBD4Q9NVX7 518 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 LDHCP07864 332 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 TOP1P11387 765 aaKnown RBP10.39□□□□□ -0.75
RPA1-201ENST00000254719 KIF5BP33176 963 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 GRM4Q14833 912 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms