RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 HAUS4Q9H6D7 363 aa21.92■■□□□ 1.1
SOX4-201ENST00000244745 SLC39A2Q9NP94 309 aa21.92■■□□□ 1.1
SOX4-201ENST00000244745 ENC1O14682 589 aa21.92■■□□□ 1.1
SOX4-201ENST00000244745 IKBKBO14920 756 aa21.92■■□□□ 1.1
SOX4-201ENST00000244745 CLGNO14967 610 aa21.92■■□□□ 1.1
SOX4-201ENST00000244745 TACO1Q9BSH4 297 aaKnown RBP21.92■■□□□ 1.1
SOX4-201ENST00000244745 ZFYVE16Q7Z3T8 1539 aa21.92■■□□□ 1.1
SOX4-201ENST00000244745 CFAP157Q5JU67 520 aa21.92■■□□□ 1.1
SOX4-201ENST00000244745 CEP128Q6ZU80 1094 aa21.92■■□□□ 1.1
SOX4-201ENST00000244745 LINC00301Q8NCQ3 95 aa21.92■■□□□ 1.1
SOX4-201ENST00000244745 BANK1Q8NDB2 785 aa21.92■■□□□ 1.1
SOX4-201ENST00000244745 GREM2Q9H772 168 aa21.92■■□□□ 1.1
SOX4-201ENST00000244745 GOLGA8HP0CJ92 632 aa21.91■■□□□ 1.1
SOX4-201ENST00000244745 PHKA1P46020 1223 aa21.91■■□□□ 1.1
SOX4-201ENST00000244745 KIF23Q02241 960 aaPredicted RBP21.91■■□□□ 1.1
SOX4-201ENST00000244745 AMFRQ9UKV5 643 aa21.91■■□□□ 1.1
SOX4-201ENST00000244745 CDK12Q9NYV4 1490 aaPredicted RBP21.91■■□□□ 1.1
SOX4-201ENST00000244745 CLCN6P51797 869 aa21.91■■□□□ 1.1
SOX4-201ENST00000244745 EXOC7Q9UPT5 735 aa21.91■■□□□ 1.1
SOX4-201ENST00000244745 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.91■■□□□ 1.1
SOX4-201ENST00000244745 RCOR1Q9UKL0 485 aa21.91■■□□□ 1.1
SOX4-201ENST00000244745 FAM169AQ9Y6X4 670 aa21.91■■□□□ 1.1
SOX4-201ENST00000244745 PCCAP05165 728 aaPredicted RBP21.91■■□□□ 1.1
SOX4-201ENST00000244745 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.91■■□□□ 1.1
SOX4-201ENST00000244745 CDC23Q9UJX2 597 aa21.91■■□□□ 1.1
SOX4-201ENST00000244745 PCDHB13Q9Y5F0 798 aa21.91■■□□□ 1.1
SOX4-201ENST00000244745 B4DLN1 442 aa21.91■■□□□ 1.1
SOX4-201ENST00000244745 DDAH1O94760 285 aa21.91■■□□□ 1.1
SOX4-201ENST00000244745 OR52Z1P0C646 297 aa21.91■■□□□ 1.1
SOX4-201ENST00000244745 BCRP11274 1271 aa21.91■■□□□ 1.1
SOX4-201ENST00000244745 NT5C3AQ9H0P0 336 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 ARHGEF10LQ9HCE6 1279 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 PANK4Q9NVE7 773 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 CCNL1Q9UK58 526 aaPredicted RBP21.9■■□□□ 1.1
SOX4-201ENST00000244745 KRIT1O00522 736 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 ABCB4P21439 1286 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 GKAP1Q5VSY0 366 aaPredicted RBP21.9■■□□□ 1.1
SOX4-201ENST00000244745 RDH13Q8NBN7 331 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 RAB17Q9H0T7 212 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 FAN1Q9Y2M0 1017 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 KDM3AQ9Y4C1 1321 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 CIAO1O76071 339 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 ARL1P40616 181 aaPredicted RBP21.9■■□□□ 1.1
SOX4-201ENST00000244745 POLR2FP61218 127 aaKnown RBP21.9■■□□□ 1.1
SOX4-201ENST00000244745 POLA2Q14181 598 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 APOA5Q6Q788 366 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 TMEM87AQ8NBN3 555 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 VCXQ9H320 206 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 NOL3O60936 208 aaKnown RBP21.9■■□□□ 1.1
SOX4-201ENST00000244745 PPP1R21Q6ZMI0 780 aa21.9■■□□□ 1.1
SOX4-201ENST00000244745 TCP10Q12799 353 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 SEPT6Q14141 434 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 SNCBQ16143 134 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 EFCAB13Q8IY85 973 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 EEF2KMTQ96G04 330 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 FOXP1Q9H334 677 aaPredicted RBP21.89■■□□□ 1.09
SOX4-201ENST00000244745 FRMD3A2A2Y4 597 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 MYCLP12524 364 aaPredicted RBP21.89■■□□□ 1.09
SOX4-201ENST00000244745 NECTIN1Q15223 517 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 UBE3CQ15386 1083 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 FBXO38Q6PIJ6 1188 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 CROCCP2Q86T23 111 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 PNMA1Q8ND90 353 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 ANAPC4Q9UJX5 808 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 SOWAHDA6NJG2 315 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 LONP1P36776 959 aaKnown RBP21.89■■□□□ 1.09
SOX4-201ENST00000244745 CLUL1Q15846 466 aa21.89■■□□□ 1.09
SOX4-201ENST00000244745 TPH2Q8IWU9 490 aa21.88■■□□□ 1.09
SOX4-201ENST00000244745 RNF10Q8N5U6 811 aaKnown RBP21.88■■□□□ 1.09
SOX4-201ENST00000244745 MIPOL1Q8TD10 442 aa21.88■■□□□ 1.09
SOX4-201ENST00000244745 MICAL1Q8TDZ2 1067 aa21.88■■□□□ 1.09
SOX4-201ENST00000244745 SH2D4AQ9H788 454 aa21.88■■□□□ 1.09
SOX4-201ENST00000244745 PLA2R1Q13018 1463 aa21.88■■□□□ 1.09
SOX4-201ENST00000244745 ANKRD42Q8N9B4 389 aa21.88■■□□□ 1.09
SOX4-201ENST00000244745 MCUR1Q96AQ8 359 aa21.88■■□□□ 1.09
SOX4-201ENST00000244745 CNOT6LQ96LI5 555 aaKnown RBP21.88■■□□□ 1.09
SOX4-201ENST00000244745 HSPA2P54652 639 aa21.88■■□□□ 1.09
SOX4-201ENST00000244745 RPAINQ86UA6 219 aa21.88■■□□□ 1.09
SOX4-201ENST00000244745 XRCC5P13010 732 aaKnown RBP21.88■■□□□ 1.09
SOX4-201ENST00000244745 PSMC4P43686 418 aa21.88■■□□□ 1.09
SOX4-201ENST00000244745 NCBP1Q09161 790 aaKnown RBP21.88■■□□□ 1.09
SOX4-201ENST00000244745 STRN3Q13033 797 aa21.88■■□□□ 1.09
SOX4-201ENST00000244745 HHATQ5VTY9 493 aa21.88■■□□□ 1.09
SOX4-201ENST00000244745 DPH5Q9H2P9 285 aa21.88■■□□□ 1.09
SOX4-201ENST00000244745 YEATS2Q9ULM3 1422 aa21.87■■□□□ 1.09
SOX4-201ENST00000244745 HNRNPH2P55795 449 aaKnown RBP21.87■■□□□ 1.09
SOX4-201ENST00000244745 NEK8Q86SG6 692 aa21.87■■□□□ 1.09
SOX4-201ENST00000244745 GPR108Q9NPR9 543 aa21.87■■□□□ 1.09
SOX4-201ENST00000244745 CYP2J2P51589 502 aa21.87■■□□□ 1.09
SOX4-201ENST00000244745 ARID5BQ14865 1188 aa21.87■■□□□ 1.09
SOX4-201ENST00000244745 SPTLC3Q9NUV7 552 aa21.87■■□□□ 1.09
SOX4-201ENST00000244745 RGS16O15492 202 aaPredicted RBP21.87■■□□□ 1.09
SOX4-201ENST00000244745 CFBP00751 764 aa21.87■■□□□ 1.09
SOX4-201ENST00000244745 CCDC38Q502W7 563 aa21.87■■□□□ 1.09
SOX4-201ENST00000244745 RNF40O75150 1001 aa21.86■■□□□ 1.09
SOX4-201ENST00000244745 CHRNDQ07001 517 aa21.86■■□□□ 1.09
SOX4-201ENST00000244745 TERF2Q15554 542 aa21.86■■□□□ 1.09
SOX4-201ENST00000244745 USP6P35125 1406 aa21.86■■□□□ 1.09
SOX4-201ENST00000244745 SLC8A1P32418 973 aa21.86■■□□□ 1.09
SOX4-201ENST00000244745 LRCH2Q5VUJ6 765 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms