RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 PDCLQ13371 301 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 NKX2-3Q8TAU0 364 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 LIMA1Q9UHB6 759 aaKnown RBP10.33□□□□□ -0.76
SRSF6-201ENST00000244020 V9GY48 417 aaPredicted RBP10.33□□□□□ -0.76
SRSF6-201ENST00000244020 RGPD8O14715 1765 aaPredicted RBP10.33□□□□□ -0.76
SRSF6-201ENST00000244020 KDM3BQ7LBC6 1761 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 A0A087X0B3 334 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 EIF3HO15372 352 aaKnown RBP eCLIP10.32□□□□□ -0.76
SRSF6-201ENST00000244020 PARP1P09874 1014 aaKnown RBP10.32□□□□□ -0.76
SRSF6-201ENST00000244020 PDE6BP35913 854 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 CCDC121Q6ZUS5 278 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 IFT81Q8WYA0 676 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 SLC24A3Q9HC58 644 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 OVOS2A0A0G2JMS6 1433 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 MYBL2P10244 700 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 STAT6P42226 847 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 TBC1D8BQ0IIM8 1120 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 PTGDRQ13258 359 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 CCDC6Q16204 474 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 FBF1Q8TES7 1133 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 MTIF2P46199 727 aaKnown RBP10.32□□□□□ -0.76
SRSF6-201ENST00000244020 VAV2P52735 878 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 TTC38Q5R3I4 469 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 ZNF654Q8IZM8 581 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 CABS1Q96KC9 395 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 ORAI2Q96SN7 254 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 PIH1D3Q9NQM4 214 aaKnown RBP10.32□□□□□ -0.76
SRSF6-201ENST00000244020 SLC4A4Q9Y6R1 1079 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 H7C1D1 291 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 CPP00450 1065 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 CCDC172P0C7W6 258 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 CXCR5P32302 372 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 UBE3CQ15386 1083 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 CFAP58Q5T655 872 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 GPIHBP1Q8IV16 184 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 SPATA20Q8TB22 786 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 ALS2CR12Q96Q35 445 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 POLD4Q9HCU8 107 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 GOPCQ9HD26 462 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 MTMR7Q9Y216 660 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 GDAQ9Y2T3 454 aa10.32□□□□□ -0.76
SRSF6-201ENST00000244020 MAP3K15Q6ZN16 1313 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 TEX2Q8IWB9 1127 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 MB21D1Q8N884 522 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.31□□□□□ -0.76
SRSF6-201ENST00000244020 MED1Q15648 1581 aaPredicted RBP10.31□□□□□ -0.76
SRSF6-201ENST00000244020 TRIM49BA6NDI0 452 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 PSMA7O14818 248 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 AKR1B10O60218 316 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 NLRP5P59047 1200 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 HELBQ8NG08 1087 aaPredicted RBP10.31□□□□□ -0.76
SRSF6-201ENST00000244020 KAT2BQ92831 832 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 RRP36Q96EU6 259 aaKnown RBP10.31□□□□□ -0.76
SRSF6-201ENST00000244020 PLIN2Q99541 437 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 LRRC1Q9BTT6 524 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 NHEJ1Q9H9Q4 299 aaPredicted RBP10.31□□□□□ -0.76
SRSF6-201ENST00000244020 A6NNZ2 444 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 NBPF26B4DH59 902 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 RPN1P04843 607 aaKnown RBP10.31□□□□□ -0.76
SRSF6-201ENST00000244020 GPTP24298 496 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 PPARAQ07869 468 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 BIRC2Q13490 618 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 TUBB8Q3ZCM7 444 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 C8orf74Q6P047 294 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 NBPF10Q6P3W6 841 aaKnown RBP10.31□□□□□ -0.76
SRSF6-201ENST00000244020 NBPF15Q8N660 670 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 STRBPQ96SI9 672 aaKnown RBP10.31□□□□□ -0.76
SRSF6-201ENST00000244020 PYM1Q9BRP8 204 aaKnown RBP10.31□□□□□ -0.76
SRSF6-201ENST00000244020 RNF41Q9H4P4 317 aaPredicted RBP10.31□□□□□ -0.76
SRSF6-201ENST00000244020 DUSP10Q9Y6W6 482 aa10.31□□□□□ -0.76
SRSF6-201ENST00000244020 ANKRD18BA2A2Z9 1011 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 B4DLN1 442 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 HGSO14964 777 aaPredicted RBP10.3□□□□□ -0.76
SRSF6-201ENST00000244020 MYCNP04198 464 aaPredicted RBP10.3□□□□□ -0.76
SRSF6-201ENST00000244020 ZNF658Q5TYW1 1059 aaPredicted RBP10.3□□□□□ -0.76
SRSF6-201ENST00000244020 PAPD7Q5XG87 772 aaKnown RBP10.3□□□□□ -0.76
SRSF6-201ENST00000244020 MYO1FO00160 1098 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 GTPBP6O43824 516 aaPredicted RBP10.3□□□□□ -0.76
SRSF6-201ENST00000244020 PRCPP42785 496 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 SWT1Q5T5J6 900 aaKnown RBP10.3□□□□□ -0.76
SRSF6-201ENST00000244020 KIF6Q6ZMV9 814 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 PIK3AP1Q6ZUJ8 805 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 CATIPQ7Z7H3 387 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 MIGA1Q8NAN2 632 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 REXO2Q9Y3B8 237 aaKnown RBP10.3□□□□□ -0.76
SRSF6-201ENST00000244020 NUTM2BA6NNL0 878 aaPredicted RBP10.3□□□□□ -0.76
SRSF6-201ENST00000244020 NUTM2EB1AL46 878 aaPredicted RBP10.3□□□□□ -0.76
SRSF6-201ENST00000244020 AGPSO00116 658 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 HERVK_113P62684 666 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 NNTQ13423 1086 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.3□□□□□ -0.76
SRSF6-201ENST00000244020 TRIM58Q8NG06 486 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 IFIH1Q9BYX4 1025 aaKnown RBP10.3□□□□□ -0.76
SRSF6-201ENST00000244020 TSGA10Q9BZW7 698 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 TANGO6Q9C0B7 1094 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 LACRTQ9GZZ8 138 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 LRP2BPQ9P2M1 347 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 LRWD1Q9UFC0 647 aa10.3□□□□□ -0.76
SRSF6-201ENST00000244020 ITGA6P23229 1130 aa10.29□□□□□ -0.76
SRSF6-201ENST00000244020 DNM2P50570 870 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms