RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 SPDYE1Q8NFV5 336 aaPredicted RBP8.15□□□□□ -1.11
MED28-201ENST00000237380 PLEKHG2Q9H7P9 1386 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 FDX1P10109 184 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 XRCC5P13010 732 aaKnown RBP8.14□□□□□ -1.11
MED28-201ENST00000237380 PAMP19021 973 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 PDE6CP51160 858 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 IQCB1Q15051 598 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 CPXCR1Q8N123 301 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 ENGASEQ8NFI3 743 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 SNX21Q969T3 373 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 KCNK9Q9NPC2 374 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 RNF139Q8WU17 664 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 SELENOSQ9BQE4 189 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 MAP3K20Q9NYL2 800 aaKnown RBP8.14□□□□□ -1.11
MED28-201ENST00000237380 COL17A1Q9UMD9 1497 aaPredicted RBP8.14□□□□□ -1.11
MED28-201ENST00000237380 CFBP00751 764 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 CLCN1P35523 988 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 CEP85Q6P2H3 762 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 RUFY3Q7L099 469 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 SKA2Q8WVK7 121 aaPredicted RBP8.14□□□□□ -1.11
MED28-201ENST00000237380 MMS19Q96T76 1030 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 HPCAL4Q9UM19 191 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 BZW2Q9Y6E2 419 aaKnown RBP8.14□□□□□ -1.11
MED28-201ENST00000237380 SDSP20132 328 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 USP40Q9NVE5 1235 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 MFSD14BQ5SR56 506 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 SLC52A2Q9HAB3 445 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 EPS15L1Q9UBC2 864 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 TESPA1A2RU30 521 aaPredicted RBP8.14□□□□□ -1.11
MED28-201ENST00000237380 INPP1P49441 399 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 RSRC2Q7L4I2 434 aaKnown RBP8.14□□□□□ -1.11
MED28-201ENST00000237380 SAP30BPQ9UHR5 308 aaKnown RBP8.14□□□□□ -1.11
MED28-201ENST00000237380 AKR1B15C9JRZ8 316 aaPredicted RBP8.14□□□□□ -1.11
MED28-201ENST00000237380 ARHGAP6O43182 974 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 GCKRQ14397 625 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 RBBP5Q15291 538 aaKnown RBP8.14□□□□□ -1.11
MED28-201ENST00000237380 MIPOL1Q8TD10 442 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 SLC7A3Q8WY07 619 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 TBC1D32Q96NH3 1257 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 MID2Q9UJV3 735 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 CUTAO60888 179 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 GSTA1P08263 222 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 GSTA2P09210 222 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 CCDC122Q5T0U0 273 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 AKNAD1Q5T1N1 836 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 FAM160B2Q86V87 743 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 ANKRD44Q8N8A2 993 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 WDR11Q9BZH6 1224 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 PRAG1Q86YV5 1406 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 MBD4O95243 580 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 RPS8P62241 208 aaKnown RBP8.14□□□□□ -1.11
MED28-201ENST00000237380 GKAP1Q5VSY0 366 aaPredicted RBP8.14□□□□□ -1.11
MED28-201ENST00000237380 KCNV1Q6PIU1 500 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 MLKLQ8NB16 471 aa8.14□□□□□ -1.11
MED28-201ENST00000237380 PSMA3P25788 255 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 ITKQ08881 620 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 FBXO11Q86XK2 927 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 ANO3Q9BYT9 981 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 ITM2BQ9Y287 266 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 PPEF1O14829 653 aaPredicted RBP8.13□□□□□ -1.11
MED28-201ENST00000237380 UAP1Q16222 522 aaPredicted RBP8.13□□□□□ -1.11
MED28-201ENST00000237380 FAM167AQ96KS9 214 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 AKT3Q9Y243 479 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 COL4A3BPQ9Y5P4 624 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 MAP3K15Q6ZN16 1313 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 ATP7AQ04656 1500 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 NBPF26B4DH59 902 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 TTC23LQ6PF05 361 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 KDM5DQ9BY66 1539 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 HOMER3Q9NSC5 361 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 STK17AQ9UEE5 414 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 BRPF3Q9ULD4 1205 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 CHMP2AO43633 222 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 GAP43P17677 238 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 PNMA8AQ86V59 439 aaPredicted RBP8.13□□□□□ -1.11
MED28-201ENST00000237380 TICAM2Q86XR7 235 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 SNX29Q8TEQ0 813 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 CFAP36Q96G28 342 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 DDX27Q96GQ7 796 aaKnown RBP8.13□□□□□ -1.11
MED28-201ENST00000237380 TTLL3Q9Y4R7 772 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 GCFC2P16383 781 aaKnown RBP8.13□□□□□ -1.11
MED28-201ENST00000237380 FBXW4P57775 412 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 CCDC25Q86WR0 208 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 RPLP2P05387 115 aaKnown RBP8.13□□□□□ -1.11
MED28-201ENST00000237380 TRIM27P14373 513 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 STAT1P42224 750 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 PREPLQ4J6C6 727 aaPredicted RBP8.13□□□□□ -1.11
MED28-201ENST00000237380 CEP85LQ5SZL2 805 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 MIGA1Q8NAN2 632 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 TMEM206Q9H813 350 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 MEIS1O00470 390 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 CDCA7LQ96GN5 454 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 AMNQ9BXJ7 453 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 PIDD1Q9HB75 910 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 GPATCH8Q9UKJ3 1502 aaKnown RBP8.13□□□□□ -1.11
MED28-201ENST00000237380 GANCQ8TET4 914 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 ESYT1Q9BSJ8 1104 aa8.13□□□□□ -1.11
MED28-201ENST00000237380 MOCS3O95396 460 aa8.12□□□□□ -1.11
MED28-201ENST00000237380 SRGAP2CP0DJJ0 459 aa8.12□□□□□ -1.11
MED28-201ENST00000237380 TNFAIP2Q03169 654 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms