RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 ADGRF4Q8IZF3 695 aa19.16■□□□□ 0.66
CHMP5-201ENST00000223500 PROCA1Q8NCQ7 364 aaPredicted RBP19.16■□□□□ 0.66
CHMP5-201ENST00000223500 TANGO6Q9C0B7 1094 aa19.16■□□□□ 0.66
CHMP5-201ENST00000223500 CPVLQ9H3G5 476 aa19.16■□□□□ 0.66
CHMP5-201ENST00000223500 RPAP3Q9H6T3 665 aaPredicted RBP19.16■□□□□ 0.66
CHMP5-201ENST00000223500 CIZ1Q9ULV3 898 aaPredicted RBP19.16■□□□□ 0.66
CHMP5-201ENST00000223500 ZBTB48P10074 688 aaPredicted RBP19.16■□□□□ 0.66
CHMP5-201ENST00000223500 XBP1P17861 261 aa19.16■□□□□ 0.66
CHMP5-201ENST00000223500 GADL1Q6ZQY3 521 aa19.16■□□□□ 0.66
CHMP5-201ENST00000223500 SAPCD2Q86UD0 394 aa19.16■□□□□ 0.66
CHMP5-201ENST00000223500 PIBF1Q8WXW3 757 aa19.16■□□□□ 0.66
CHMP5-201ENST00000223500 ALG1Q9BT22 464 aa19.16■□□□□ 0.66
CHMP5-201ENST00000223500 USP17L15C9J2P7 530 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 USP17L13C9JLJ4 530 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 USP17L11C9JVI0 530 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 USP17L18D6R9N7 530 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 USP17L22D6RA61 530 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 USP17L17D6RBQ6 530 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 USP17L19D6RCP7 530 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 USP17L20D6RJB6 530 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 ZNF157P51786 506 aaPredicted RBP19.15■□□□□ 0.66
CHMP5-201ENST00000223500 USP17L24Q0WX57 530 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 DGKZQ13574 1117 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 TRIM29Q14134 588 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 RGMBQ6NW40 437 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 HOMER1Q86YM7 354 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 PRPF38AQ8NAV1 312 aaKnown RBP19.15■□□□□ 0.66
CHMP5-201ENST00000223500 C8orf76Q96K31 380 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 JMJD4Q9H9V9 463 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 ABT1Q9ULW3 272 aaKnown RBP19.15■□□□□ 0.66
CHMP5-201ENST00000223500 TLL2Q9Y6L7 1015 aa19.15■□□□□ 0.66
CHMP5-201ENST00000223500 hCG_1642624A0A1W2PR95 340 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 H3BQV1 296 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 FLOT1O75955 427 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 SCG2P13521 617 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 SYT1P21579 422 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 GJA5P36382 358 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 GTF2A2P52657 109 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 NUCB2P80303 420 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 PABPC4Q13310 644 aaKnown RBP eCLIP19.14■□□□□ 0.652e-6■□□□□ 9.2
CHMP5-201ENST00000223500 PFKFB3Q16875 520 aaPredicted RBP19.14■□□□□ 0.65
CHMP5-201ENST00000223500 SLC35G1Q2M3R5 365 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 IFFO2Q5TF58 517 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 SPRYD7Q5W111 196 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 RGS22Q8NE09 1264 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 KIFC2Q96AC6 838 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 PIGSQ96S52 555 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 SLF1Q9BQI6 1058 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 CHMP5Q9NZZ3 219 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 PRR12Q9ULL5 1215 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 LOC285556D6RIA3 1793 aa19.14■□□□□ 0.65
CHMP5-201ENST00000223500 PNMA6FA0A0J9YX94 578 aa19.13■□□□□ 0.65
CHMP5-201ENST00000223500 FDX1P10109 184 aa19.13■□□□□ 0.65
CHMP5-201ENST00000223500 CETPP11597 493 aa19.13■□□□□ 0.65
CHMP5-201ENST00000223500 DDIT3P35638 169 aa19.13■□□□□ 0.65
CHMP5-201ENST00000223500 PKN1Q16512 942 aa19.13■□□□□ 0.65
CHMP5-201ENST00000223500 MTMR8Q96EF0 704 aa19.13■□□□□ 0.65
CHMP5-201ENST00000223500 hCG_1984214I3L0E3 225 aa19.12■□□□□ 0.65
CHMP5-201ENST00000223500 ZBTB5O15062 677 aa19.12■□□□□ 0.65
CHMP5-201ENST00000223500 STX6O43752 255 aa19.12■□□□□ 0.65
CHMP5-201ENST00000223500 TRAF1Q13077 416 aa19.12■□□□□ 0.65
CHMP5-201ENST00000223500 CDC37Q16543 378 aaPredicted RBP19.12■□□□□ 0.65
CHMP5-201ENST00000223500 SAMD1Q6SPF0 538 aaPredicted RBP19.12■□□□□ 0.65
CHMP5-201ENST00000223500 CATSPERGQ6ZRH7 1159 aa19.12■□□□□ 0.65
CHMP5-201ENST00000223500 ZNF713Q8N859 430 aaPredicted RBP19.12■□□□□ 0.65
CHMP5-201ENST00000223500 HHIPL1Q96JK4 782 aa19.12■□□□□ 0.65
CHMP5-201ENST00000223500 FBXO28Q9NVF7 368 aa19.12■□□□□ 0.65
CHMP5-201ENST00000223500 PPP1R9AQ9ULJ8 1098 aa19.12■□□□□ 0.65
CHMP5-201ENST00000223500 AGTPBP1Q9UPW5 1226 aa19.12■□□□□ 0.65
CHMP5-201ENST00000223500 CTDP1Q9Y5B0 961 aaPredicted RBP19.12■□□□□ 0.65
CHMP5-201ENST00000223500 WDR33Q9C0J8 1336 aaKnown RBP19.11■□□□□ 0.65
CHMP5-201ENST00000223500 COG2Q14746 738 aa19.11■□□□□ 0.65
CHMP5-201ENST00000223500 RASAL3Q86YV0 1011 aa19.11■□□□□ 0.65
CHMP5-201ENST00000223500 FAM177A1Q8N128 213 aaPredicted RBP19.11■□□□□ 0.65
CHMP5-201ENST00000223500 CCDC102AQ96A19 550 aa19.11■□□□□ 0.65
CHMP5-201ENST00000223500 AIFM3Q96NN9 605 aa19.11■□□□□ 0.65
CHMP5-201ENST00000223500 HOXC10Q9NYD6 342 aa19.11■□□□□ 0.65
CHMP5-201ENST00000223500 MYPNQ86TC9 1320 aa19.11■□□□□ 0.65
CHMP5-201ENST00000223500 VPS37CA5D8V6 355 aaPredicted RBP19.1■□□□□ 0.65
CHMP5-201ENST00000223500 HOXA7P31268 230 aaPredicted RBP19.1■□□□□ 0.65
CHMP5-201ENST00000223500 FOSBP53539 338 aa19.1■□□□□ 0.65
CHMP5-201ENST00000223500 MKRN3Q13064 507 aaKnown RBP19.1■□□□□ 0.65
CHMP5-201ENST00000223500 QRICH1Q2TAL8 776 aa19.1■□□□□ 0.65
CHMP5-201ENST00000223500 HEATR3Q7Z4Q2 680 aa19.1■□□□□ 0.65
CHMP5-201ENST00000223500 FBXO18Q8NFZ0 1043 aa19.1■□□□□ 0.65
CHMP5-201ENST00000223500 CCDC12Q8WUD4 166 aaPredicted RBP19.1■□□□□ 0.65
CHMP5-201ENST00000223500 SH3GLB2Q9NR46 395 aa19.1■□□□□ 0.65
CHMP5-201ENST00000223500 PARP14Q460N5 1801 aa19.1■□□□□ 0.65
CHMP5-201ENST00000223500 CCL15-CCL14A0A0B4J2E2 113 aa19.09■□□□□ 0.65
CHMP5-201ENST00000223500 ZBED4O75132 1171 aa19.09■□□□□ 0.65
CHMP5-201ENST00000223500 DSG3P32926 999 aa19.09■□□□□ 0.65
CHMP5-201ENST00000223500 IRX3P78415 501 aaPredicted RBP19.09■□□□□ 0.65
CHMP5-201ENST00000223500 CCL15Q16663 113 aa19.09■□□□□ 0.65
CHMP5-201ENST00000223500 TREML2Q5T2D2 321 aa19.09■□□□□ 0.65
CHMP5-201ENST00000223500 CCDC148Q8NFR7 591 aa19.09■□□□□ 0.65
CHMP5-201ENST00000223500 AMNQ9BXJ7 453 aa19.09■□□□□ 0.65
CHMP5-201ENST00000223500 RANBP17Q9H2T7 1088 aaKnown RBP19.09■□□□□ 0.65
CHMP5-201ENST00000223500 BARHL2Q9NY43 387 aa19.09■□□□□ 0.65
CHMP5-201ENST00000223500 PNMA2Q9UL42 364 aa19.09■□□□□ 0.65
CHMP5-201ENST00000223500 SLC10A3P09131 477 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms