RNA–Protein interactions for RNA: ENST00000222812.7

STX1A-201, Transcript of syntaxin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STX1A, Length 2,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-201ENST00000222812 SMARCA1P28370 1054 aa17.3■□□□□ 0.36
STX1A-201ENST00000222812 SNAP25P60880 206 aa17.3■□□□□ 0.36
STX1A-201ENST00000222812 MTMR2Q13614 643 aa17.3■□□□□ 0.36
STX1A-201ENST00000222812 TRIM29Q14134 588 aa17.3■□□□□ 0.36
STX1A-201ENST00000222812 NOL9Q5SY16 702 aaKnown RBP17.3■□□□□ 0.36
STX1A-201ENST00000222812 WWC2Q6AWC2 1192 aa17.3■□□□□ 0.36
STX1A-201ENST00000222812 ZNF408Q9H9D4 720 aa17.3■□□□□ 0.36
STX1A-201ENST00000222812 SYNPO2Q9UMS6 1093 aa17.3■□□□□ 0.36
STX1A-201ENST00000222812 TRIM75PA6NK02 468 aa17.3■□□□□ 0.36
STX1A-201ENST00000222812 NF2P35240 595 aa17.3■□□□□ 0.36
STX1A-201ENST00000222812 KIF23Q02241 960 aaPredicted RBP17.3■□□□□ 0.36
STX1A-201ENST00000222812 DNM1Q05193 864 aaKnown RBP17.3■□□□□ 0.36
STX1A-201ENST00000222812 RRP36Q96EU6 259 aaKnown RBP17.3■□□□□ 0.36
STX1A-201ENST00000222812 SH2D4AQ9H788 454 aa17.3■□□□□ 0.36
STX1A-201ENST00000222812 MMP1P03956 469 aa17.29■□□□□ 0.36
STX1A-201ENST00000222812 HEATR3Q7Z4Q2 680 aa17.29■□□□□ 0.36
STX1A-201ENST00000222812 OXER1Q8TDS5 423 aa17.29■□□□□ 0.36
STX1A-201ENST00000222812 GDPD2Q9HCC8 539 aa17.29■□□□□ 0.36
STX1A-201ENST00000222812 EMILIN3Q9NT22 766 aa17.29■□□□□ 0.36
STX1A-201ENST00000222812 BTBD18B2RXH4 712 aa17.28■□□□□ 0.36
STX1A-201ENST00000222812 GOLGA6L22H0YM25 854 aa17.28■□□□□ 0.36
STX1A-201ENST00000222812 PPP1R11O60927 126 aaPredicted RBP17.28■□□□□ 0.36
STX1A-201ENST00000222812 IREB2P48200 963 aaKnown RBP17.28■□□□□ 0.36
STX1A-201ENST00000222812 IKQ13123 557 aaPredicted RBP17.28■□□□□ 0.36
STX1A-201ENST00000222812 LDHDQ86WU2 507 aa17.28■□□□□ 0.36
STX1A-201ENST00000222812 ZNF280CQ8ND82 737 aa17.28■□□□□ 0.36
STX1A-201ENST00000222812 WDR18Q9BV38 432 aa17.28■□□□□ 0.36
STX1A-201ENST00000222812 PHF20Q9BVI0 1012 aa17.28■□□□□ 0.36
STX1A-201ENST00000222812 KIAA1683Q9H0B3 1180 aa17.28■□□□□ 0.36
STX1A-201ENST00000222812 ELP3Q9H9T3 547 aa17.28■□□□□ 0.36
STX1A-201ENST00000222812 CNPY2Q9Y2B0 182 aa17.28■□□□□ 0.36
STX1A-201ENST00000222812 PARP14Q460N5 1801 aa17.28■□□□□ 0.36
STX1A-201ENST00000222812 BACE1P56817 501 aa17.28■□□□□ 0.36
STX1A-201ENST00000222812 DIS3L2Q8IYB7 885 aaKnown RBP17.28■□□□□ 0.36
STX1A-201ENST00000222812 FBXO28Q9NVF7 368 aa17.28■□□□□ 0.36
STX1A-201ENST00000222812 RBM27Q9P2N5 1060 aaKnown RBP17.28■□□□□ 0.36
STX1A-201ENST00000222812 SEC63Q9UGP8 760 aaKnown RBP17.28■□□□□ 0.36
STX1A-201ENST00000222812 STXBP3O00186 592 aa17.27■□□□□ 0.36
STX1A-201ENST00000222812 NR5A1Q13285 461 aa17.27■□□□□ 0.36
STX1A-201ENST00000222812 NPY5RQ15761 445 aa17.27■□□□□ 0.36
STX1A-201ENST00000222812 SAMD1Q6SPF0 538 aaPredicted RBP17.27■□□□□ 0.36
STX1A-201ENST00000222812 COA7Q96BR5 231 aa17.27■□□□□ 0.36
STX1A-201ENST00000222812 MTMR8Q96EF0 704 aa17.27■□□□□ 0.36
STX1A-201ENST00000222812 ZSCAN16Q9H4T2 348 aaPredicted RBP17.27■□□□□ 0.36
STX1A-201ENST00000222812 GRPEL1Q9HAV7 217 aa17.27■□□□□ 0.36
STX1A-201ENST00000222812 AS3MTQ9HBK9 375 aa17.27■□□□□ 0.36
STX1A-201ENST00000222812 AFG3L2Q9Y4W6 797 aa17.27■□□□□ 0.36
STX1A-201ENST00000222812 CSADQ9Y600 493 aa17.27■□□□□ 0.36
STX1A-201ENST00000222812 TAL1P17542 331 aaPredicted RBP17.27■□□□□ 0.35
STX1A-201ENST00000222812 HMGCS2P54868 508 aa17.27■□□□□ 0.35
STX1A-201ENST00000222812 SYDE2Q5VT97 1194 aa17.27■□□□□ 0.35
STX1A-201ENST00000222812 BARHL2Q9NY43 387 aa17.27■□□□□ 0.35
STX1A-201ENST00000222812 TFIP11Q9UBB9 837 aaKnown RBP17.27■□□□□ 0.35
STX1A-201ENST00000222812 PRR12Q9ULL5 1215 aa17.27■□□□□ 0.35
STX1A-201ENST00000222812 XBP1P17861 261 aa17.26■□□□□ 0.35
STX1A-201ENST00000222812 STAT2P52630 851 aa17.26■□□□□ 0.35
STX1A-201ENST00000222812 MAP3K11Q16584 847 aa17.26■□□□□ 0.35
STX1A-201ENST00000222812 NOM1Q5C9Z4 860 aaKnown RBP17.26■□□□□ 0.35
STX1A-201ENST00000222812 BTNL9Q6UXG8 535 aa17.26■□□□□ 0.35
STX1A-201ENST00000222812 ANKRD13AQ8IZ07 590 aa17.26■□□□□ 0.35
STX1A-201ENST00000222812 FTOQ9C0B1 505 aaKnown RBP eCLIP17.26■□□□□ 0.35
STX1A-201ENST00000222812 RLFQ13129 1914 aa17.26■□□□□ 0.35
STX1A-201ENST00000222812 PNMA6FA0A0J9YX94 578 aa17.25■□□□□ 0.35
STX1A-201ENST00000222812 ZBTB5O15062 677 aa17.25■□□□□ 0.35
STX1A-201ENST00000222812 VCAM1P19320 739 aa17.25■□□□□ 0.35
STX1A-201ENST00000222812 NCLP19338 710 aaKnown RBP17.25■□□□□ 0.35
STX1A-201ENST00000222812 NLRP5P59047 1200 aa17.25■□□□□ 0.35
STX1A-201ENST00000222812 CDC37Q16543 378 aaPredicted RBP17.25■□□□□ 0.35
STX1A-201ENST00000222812 QRICH1Q2TAL8 776 aa17.25■□□□□ 0.35
STX1A-201ENST00000222812 KIFC2Q96AC6 838 aa17.25■□□□□ 0.35
STX1A-201ENST00000222812 ATP6V1DQ9Y5K8 247 aa17.25■□□□□ 0.35
STX1A-201ENST00000222812 FAM205CA6NFA0 338 aa17.25■□□□□ 0.35
STX1A-201ENST00000222812 U2AF2P26368 475 aaKnown RBP eCLIP17.25■□□□□ 0.35
STX1A-201ENST00000222812 GNL2Q13823 731 aaKnown RBP17.25■□□□□ 0.35
STX1A-201ENST00000222812 EARS2Q5JPH6 523 aaKnown RBP17.25■□□□□ 0.35
STX1A-201ENST00000222812 RGS22Q8NE09 1264 aa17.25■□□□□ 0.35
STX1A-201ENST00000222812 TRPM7Q96QT4 1865 aa17.24■□□□□ 0.35
STX1A-201ENST00000222812 NAPAP54920 295 aa17.24■□□□□ 0.35
STX1A-201ENST00000222812 CEBPZQ03701 1054 aaKnown RBP17.24■□□□□ 0.35
STX1A-201ENST00000222812 SAFBQ15424 915 aaKnown RBP eCLIP17.24■□□□□ 0.35
STX1A-201ENST00000222812 ARMC9Q7Z3E5 817 aa17.24■□□□□ 0.35
STX1A-201ENST00000222812 LPAR1Q92633 364 aa17.24■□□□□ 0.35
STX1A-201ENST00000222812 OTUD5Q96G74 571 aa17.24■□□□□ 0.35
STX1A-201ENST00000222812 PANK2Q9BZ23 570 aa17.24■□□□□ 0.35
STX1A-201ENST00000222812 COL11A1P12107 1806 aaPredicted RBP17.24■□□□□ 0.35
STX1A-201ENST00000222812 WDR46O15213 610 aaKnown RBP17.24■□□□□ 0.35
STX1A-201ENST00000222812 FIBPO43427 364 aa17.24■□□□□ 0.35
STX1A-201ENST00000222812 KRT2P35908 639 aa17.24■□□□□ 0.35
STX1A-201ENST00000222812 USP14P54578 494 aa17.24■□□□□ 0.35
STX1A-201ENST00000222812 RASGRP4Q8TDF6 673 aa17.24■□□□□ 0.35
STX1A-201ENST00000222812 RPAP3Q9H6T3 665 aaPredicted RBP17.24■□□□□ 0.35
STX1A-201ENST00000222812 SH3GLB2Q9NR46 395 aa17.24■□□□□ 0.35
STX1A-201ENST00000222812 IRF6O14896 467 aa17.23■□□□□ 0.35
STX1A-201ENST00000222812 ITGBL1O95965 494 aaPredicted RBP17.23■□□□□ 0.35
STX1A-201ENST00000222812 LDLRAD1Q5T700 205 aa17.23■□□□□ 0.35
STX1A-201ENST00000222812 MYSM1Q5VVJ2 828 aa17.23■□□□□ 0.35
STX1A-201ENST00000222812 USP28Q96RU2 1077 aa17.23■□□□□ 0.35
STX1A-201ENST00000222812 TANGO6Q9C0B7 1094 aa17.23■□□□□ 0.35
STX1A-201ENST00000222812 SMCO2A6NFE2 343 aa17.22■□□□□ 0.35
STX1A-201ENST00000222812 PRPF40AO75400 957 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms