RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 SPTY2D1Q68D10 685 aaPredicted RBP16.51■□□□□ 0.23
CNOT3-201ENST00000221232 TMCO3Q6UWJ1 677 aa16.51■□□□□ 0.23
CNOT3-201ENST00000221232 GPIHBP1Q8IV16 184 aa16.51■□□□□ 0.23
CNOT3-201ENST00000221232 KIFC2Q96AC6 838 aa16.51■□□□□ 0.23
CNOT3-201ENST00000221232 TFR2Q9UP52 801 aa16.51■□□□□ 0.23
CNOT3-201ENST00000221232 PHLPP1O60346 1717 aa16.51■□□□□ 0.23
CNOT3-201ENST00000221232 POLR3GO15318 223 aaPredicted RBP16.51■□□□□ 0.23
CNOT3-201ENST00000221232 TUBB4AP04350 444 aa16.51■□□□□ 0.23
CNOT3-201ENST00000221232 CALML3P27482 149 aa16.51■□□□□ 0.23
CNOT3-201ENST00000221232 COPB1P53618 953 aaKnown RBP16.51■□□□□ 0.23
CNOT3-201ENST00000221232 UIMC1Q96RL1 719 aa16.51■□□□□ 0.23
CNOT3-201ENST00000221232 GTPBP4Q9BZE4 634 aaKnown RBP16.51■□□□□ 0.23
CNOT3-201ENST00000221232 MYH6P13533 1939 aa16.5■□□□□ 0.23
CNOT3-201ENST00000221232 KLRF2D3W0D1 207 aa16.5■□□□□ 0.23
CNOT3-201ENST00000221232 EIF6P56537 245 aaKnown RBP16.5■□□□□ 0.23
CNOT3-201ENST00000221232 PANX2Q96RD6 677 aa16.5■□□□□ 0.23
CNOT3-201ENST00000221232 CTAGE1Q96RT6 745 aa16.5■□□□□ 0.23
CNOT3-201ENST00000221232 SLF1Q9BQI6 1058 aa16.5■□□□□ 0.23
CNOT3-201ENST00000221232 NOL10Q9BSC4 688 aaKnown RBP16.5■□□□□ 0.23
CNOT3-201ENST00000221232 FHOD1Q9Y613 1164 aa16.5■□□□□ 0.23
CNOT3-201ENST00000221232 AMOTL1Q8IY63 956 aa16.5■□□□□ 0.23
CNOT3-201ENST00000221232 CHP1Q99653 195 aa16.5■□□□□ 0.23
CNOT3-201ENST00000221232 F8W031 263 aaPredicted RBP16.49■□□□□ 0.23
CNOT3-201ENST00000221232 BAG3O95817 575 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 KRT9P35527 623 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 PBX1P40424 430 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 ERVK-24P63145 666 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 BMS1Q14692 1282 aaKnown RBP16.49■□□□□ 0.23
CNOT3-201ENST00000221232 KIF4BQ2VIQ3 1234 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 TCP11X2Q5H9J9 407 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 ZNF658Q5TYW1 1059 aaPredicted RBP16.49■□□□□ 0.23
CNOT3-201ENST00000221232 FAM196AQ6ZSG2 479 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 DGKHQ86XP1 1220 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 LRRC15Q8TF66 581 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 HPS3Q969F9 1004 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 MKRN1Q9UHC7 482 aaKnown RBP16.49■□□□□ 0.23
CNOT3-201ENST00000221232 MRFAP1Q9Y605 127 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 CNTNAP4Q9C0A0 1308 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 EFCAB8A8MWE9 144 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 CCNT1O60563 726 aaKnown RBP16.49■□□□□ 0.23
CNOT3-201ENST00000221232 TPM1P09493 284 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 PNMA6AP0CW24 399 aaPredicted RBP16.49■□□□□ 0.23
CNOT3-201ENST00000221232 ERCC3P19447 782 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 BTDP43251 543 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 NAPAP54920 295 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 NAALADL2Q58DX5 795 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 SRRTQ9BXP5 876 aaKnown RBP16.49■□□□□ 0.23
CNOT3-201ENST00000221232 DISC1Q9NRI5 854 aa16.49■□□□□ 0.23
CNOT3-201ENST00000221232 GOLGA6L9A6NEM1 432 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 KIF5CO60282 957 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 TRAPPC10P48553 1259 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 GPSM2P81274 684 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 TRAPPC3LQ5T215 181 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 JAKMIP3Q5VZ66 844 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 WDR66Q8TBY9 1149 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 TRIM10Q9UDY6 481 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 RWDD2AQ9UIY3 292 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 ERICH4A6NGS2 130 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 UFL1O94874 794 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 RASA1P20936 1047 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 LONP1P36776 959 aaKnown RBP16.48■□□□□ 0.23
CNOT3-201ENST00000221232 EYA3Q99504 573 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 ARGLU1Q9NWB6 273 aaPredicted RBP16.48■□□□□ 0.23
CNOT3-201ENST00000221232 BIN2Q9UBW5 565 aaPredicted RBP16.48■□□□□ 0.23
CNOT3-201ENST00000221232 PLCH1Q4KWH8 1693 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 FRMPD2Q68DX3 1309 aaPredicted RBP16.48■□□□□ 0.23
CNOT3-201ENST00000221232 PARP1P09874 1014 aaKnown RBP16.48■□□□□ 0.23
CNOT3-201ENST00000221232 TECP42680 631 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 PICALMQ13492 652 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 GRM4Q14833 912 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 CLEC10AQ8IUN9 316 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 TEX11Q8IYF3 940 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 SLC35F6Q8N357 371 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 CNBD1Q8NA66 436 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 PARD6BQ9BYG5 372 aa16.48■□□□□ 0.23
CNOT3-201ENST00000221232 ZCCHC17Q9NP64 241 aaKnown RBP16.48■□□□□ 0.23
CNOT3-201ENST00000221232 STXBP3O00186 592 aa16.47■□□□□ 0.23
CNOT3-201ENST00000221232 CDK8P49336 464 aa16.47■□□□□ 0.23
CNOT3-201ENST00000221232 UTP14CQ5TAP6 766 aaKnown RBP16.47■□□□□ 0.23
CNOT3-201ENST00000221232 ANKRD20A12PQ8NF67 263 aa16.47■□□□□ 0.23
CNOT3-201ENST00000221232 TRIM47Q96LD4 638 aa16.47■□□□□ 0.23
CNOT3-201ENST00000221232 TMEM260Q9NX78 707 aa16.47■□□□□ 0.23
CNOT3-201ENST00000221232 SMCO2A6NFE2 343 aa16.47■□□□□ 0.23
CNOT3-201ENST00000221232 PLA2G4AP47712 749 aa16.47■□□□□ 0.23
CNOT3-201ENST00000221232 GRAPQ13588 217 aa16.47■□□□□ 0.23
CNOT3-201ENST00000221232 CCDC178Q5BJE1 867 aa16.47■□□□□ 0.23
CNOT3-201ENST00000221232 IRF2BP1Q8IU81 584 aa16.47■□□□□ 0.23
CNOT3-201ENST00000221232 CNGA4Q8IV77 575 aa16.47■□□□□ 0.23
CNOT3-201ENST00000221232 GRAPLQ8TC17 118 aaPredicted RBP16.47■□□□□ 0.23
CNOT3-201ENST00000221232 ABHD10Q9NUJ1 306 aa16.47■□□□□ 0.23
CNOT3-201ENST00000221232 TXNRD1Q16881 649 aa16.46■□□□□ 0.23
CNOT3-201ENST00000221232 RPGRQ92834 1020 aaKnown RBP16.46■□□□□ 0.23
CNOT3-201ENST00000221232 LIMA1Q9UHB6 759 aaKnown RBP16.46■□□□□ 0.23
CNOT3-201ENST00000221232 RIMBP2O15034 1052 aa16.46■□□□□ 0.23
CNOT3-201ENST00000221232 SLURP2P0DP57 97 aa16.46■□□□□ 0.23
CNOT3-201ENST00000221232 KLK7P49862 253 aa16.46■□□□□ 0.23
CNOT3-201ENST00000221232 TERF2Q15554 542 aa16.46■□□□□ 0.23
CNOT3-201ENST00000221232 ARL6IP4Q66PJ3 421 aaKnown RBP16.46■□□□□ 0.23
CNOT3-201ENST00000221232 ZNF804AQ7Z570 1209 aa16.46■□□□□ 0.23
CNOT3-201ENST00000221232 PIGSQ96S52 555 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms