RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 SH2D4AQ9H788 454 aa25.36■■□□□ 1.65
HOXC8-201ENST00000040584 GOPCQ9HD26 462 aa25.36■■□□□ 1.65
HOXC8-201ENST00000040584 SCG2P13521 617 aa25.36■■□□□ 1.65
HOXC8-201ENST00000040584 NF2P35240 595 aa25.36■■□□□ 1.65
HOXC8-201ENST00000040584 PFKFB3Q16875 520 aaPredicted RBP25.36■■□□□ 1.65
HOXC8-201ENST00000040584 FEZ1Q99689 392 aa25.36■■□□□ 1.65
HOXC8-201ENST00000040584 ZSCAN16Q9H4T2 348 aaPredicted RBP25.36■■□□□ 1.65
HOXC8-201ENST00000040584 RIOX1Q9H6W3 641 aa25.36■■□□□ 1.65
HOXC8-201ENST00000040584 VPS54Q9P1Q0 977 aa25.36■■□□□ 1.65
HOXC8-201ENST00000040584 NOL7Q9UMY1 257 aaKnown RBP25.36■■□□□ 1.65
HOXC8-201ENST00000040584 PTPRAP18433 802 aa25.35■■□□□ 1.65
HOXC8-201ENST00000040584 SHISA4Q96DD7 197 aa25.35■■□□□ 1.65
HOXC8-201ENST00000040584 VCPKMTQ9H867 229 aa25.35■■□□□ 1.65
HOXC8-201ENST00000040584 KCNJ14Q9UNX9 436 aa25.35■■□□□ 1.65
HOXC8-201ENST00000040584 GADD45BO75293 160 aaPredicted RBP25.34■■□□□ 1.65
HOXC8-201ENST00000040584 BMP3P12645 472 aa25.34■■□□□ 1.65
HOXC8-201ENST00000040584 MAP3K9P80192 1104 aa25.34■■□□□ 1.65
HOXC8-201ENST00000040584 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.34■■□□□ 1.65
HOXC8-201ENST00000040584 HOMER1Q86YM7 354 aa25.34■■□□□ 1.65
HOXC8-201ENST00000040584 CCDC39Q9UFE4 941 aa25.34■■□□□ 1.65
HOXC8-201ENST00000040584 NOL9Q5SY16 702 aaKnown RBP25.34■■□□□ 1.65
HOXC8-201ENST00000040584 ADGRF4Q8IZF3 695 aa25.34■■□□□ 1.65
HOXC8-201ENST00000040584 PIGSQ96S52 555 aa25.34■■□□□ 1.65
HOXC8-201ENST00000040584 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.34■■□□□ 1.65
HOXC8-201ENST00000040584 CNPY2Q9Y2B0 182 aa25.34■■□□□ 1.65
HOXC8-201ENST00000040584 TRAF5O00463 557 aa25.33■■□□□ 1.65
HOXC8-201ENST00000040584 FAM173BQ6P4H8 233 aa25.33■■□□□ 1.65
HOXC8-201ENST00000040584 MOB2Q70IA6 237 aa25.33■■□□□ 1.65
HOXC8-201ENST00000040584 GPKOWQ92917 476 aaPredicted RBP eCLIP25.33■■□□□ 1.65
HOXC8-201ENST00000040584 RRP36Q96EU6 259 aaKnown RBP25.33■■□□□ 1.65
HOXC8-201ENST00000040584 NAP1L5Q96NT1 182 aaPredicted RBP25.33■■□□□ 1.65
HOXC8-201ENST00000040584 ZHX2Q9Y6X8 837 aa25.33■■□□□ 1.65
HOXC8-201ENST00000040584 FMR1Q06787 632 aaKnown RBP eCLIP25.32■■□□□ 1.64
HOXC8-201ENST00000040584 SPP2Q13103 211 aa25.32■■□□□ 1.64
HOXC8-201ENST00000040584 VGLL4Q14135 290 aa25.32■■□□□ 1.64
HOXC8-201ENST00000040584 TTLL12Q14166 644 aaPredicted RBP25.32■■□□□ 1.64
HOXC8-201ENST00000040584 JMJD4Q9H9V9 463 aa25.32■■□□□ 1.64
HOXC8-201ENST00000040584 TMEM232C9JQI7 657 aa25.32■■□□□ 1.64
HOXC8-201ENST00000040584 XBP1P17861 261 aa25.32■■□□□ 1.64
HOXC8-201ENST00000040584 IREB2P48200 963 aaKnown RBP25.32■■□□□ 1.64
HOXC8-201ENST00000040584 FAM83BQ5T0W9 1011 aa25.32■■□□□ 1.64
HOXC8-201ENST00000040584 LDHDQ86WU2 507 aa25.32■■□□□ 1.64
HOXC8-201ENST00000040584 WDR18Q9BV38 432 aa25.32■■□□□ 1.64
HOXC8-201ENST00000040584 KIAA1683Q9H0B3 1180 aa25.32■■□□□ 1.64
HOXC8-201ENST00000040584 GDPD2Q9HCC8 539 aa25.32■■□□□ 1.64
HOXC8-201ENST00000040584 USP17L10C9JJH3 530 aa25.31■■□□□ 1.64
HOXC8-201ENST00000040584 DNM1Q05193 864 aaKnown RBP25.31■■□□□ 1.64
HOXC8-201ENST00000040584 DGKZQ13574 1117 aa25.31■■□□□ 1.64
HOXC8-201ENST00000040584 MTMR2Q13614 643 aa25.31■■□□□ 1.64
HOXC8-201ENST00000040584 AS3MTQ9HBK9 375 aa25.31■■□□□ 1.64
HOXC8-201ENST00000040584 SEC63Q9UGP8 760 aaKnown RBP25.31■■□□□ 1.64
HOXC8-201ENST00000040584 SNCAIPQ9Y6H5 919 aa25.31■■□□□ 1.64
HOXC8-201ENST00000040584 KIF28PB7ZC32 967 aa25.3■■□□□ 1.64
HOXC8-201ENST00000040584 MMP1P03956 469 aa25.3■■□□□ 1.64
HOXC8-201ENST00000040584 KIF23Q02241 960 aaPredicted RBP25.3■■□□□ 1.64
HOXC8-201ENST00000040584 IKQ13123 557 aaPredicted RBP25.3■■□□□ 1.64
HOXC8-201ENST00000040584 HEATR3Q7Z4Q2 680 aa25.3■■□□□ 1.64
HOXC8-201ENST00000040584 ZNF280CQ8ND82 737 aa25.3■■□□□ 1.64
HOXC8-201ENST00000040584 WWC2Q6AWC2 1192 aa25.3■■□□□ 1.64
HOXC8-201ENST00000040584 CSADQ9Y600 493 aa25.3■■□□□ 1.64
HOXC8-201ENST00000040584 TRIM75PA6NK02 468 aa25.29■■□□□ 1.64
HOXC8-201ENST00000040584 ZNF500O60304 480 aaPredicted RBP25.29■■□□□ 1.64
HOXC8-201ENST00000040584 PHF20Q9BVI0 1012 aa25.29■■□□□ 1.64
HOXC8-201ENST00000040584 ZNF408Q9H9D4 720 aa25.29■■□□□ 1.64
HOXC8-201ENST00000040584 BACE1P56817 501 aa25.28■■□□□ 1.64
HOXC8-201ENST00000040584 TYW1BQ6NUM6 668 aa25.28■■□□□ 1.64
HOXC8-201ENST00000040584 OTOFQ9HC10 1997 aa25.28■■□□□ 1.64
HOXC8-201ENST00000040584 SAFBQ15424 915 aaKnown RBP eCLIP25.28■■□□□ 1.64
HOXC8-201ENST00000040584 SYDE2Q5VT97 1194 aa25.28■■□□□ 1.64
HOXC8-201ENST00000040584 BTNL9Q6UXG8 535 aa25.28■■□□□ 1.64
HOXC8-201ENST00000040584 DIS3L2Q8IYB7 885 aaKnown RBP25.28■■□□□ 1.64
HOXC8-201ENST00000040584 MTMR8Q96EF0 704 aa25.28■■□□□ 1.64
HOXC8-201ENST00000040584 EMILIN3Q9NT22 766 aa25.28■■□□□ 1.64
HOXC8-201ENST00000040584 BARHL2Q9NY43 387 aa25.28■■□□□ 1.64
HOXC8-201ENST00000040584 PAPPA2Q9BXP8 1791 aa25.27■■□□□ 1.64
HOXC8-201ENST00000040584 BTBD18B2RXH4 712 aa25.27■■□□□ 1.64
HOXC8-201ENST00000040584 STXBP3O00186 592 aa25.27■■□□□ 1.64
HOXC8-201ENST00000040584 U2AF2P26368 475 aaKnown RBP eCLIP25.27■■□□□ 1.64
HOXC8-201ENST00000040584 STAT2P52630 851 aa25.27■■□□□ 1.64
HOXC8-201ENST00000040584 KRT85P78386 507 aa25.27■■□□□ 1.64
HOXC8-201ENST00000040584 MAP3K11Q16584 847 aa25.27■■□□□ 1.64
HOXC8-201ENST00000040584 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.27■■□□□ 1.64
HOXC8-201ENST00000040584 BRAPQ7Z569 592 aa25.27■■□□□ 1.64
HOXC8-201ENST00000040584 CNKSR2Q8WXI2 1034 aa25.27■■□□□ 1.64
HOXC8-201ENST00000040584 CLMNQ96JQ2 1002 aa25.27■■□□□ 1.64
HOXC8-201ENST00000040584 AFG3L2Q9Y4W6 797 aa25.27■■□□□ 1.64
HOXC8-201ENST00000040584 PHIPQ8WWQ0 1821 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 ELP1O95163 1332 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 PNMA6FA0A0J9YX94 578 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 USP14P54578 494 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 NLRP5P59047 1200 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 GNL2Q13823 731 aaKnown RBP25.26■■□□□ 1.63
HOXC8-201ENST00000040584 ARMC9Q7Z3E5 817 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 ANKRD13AQ8IZ07 590 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 OXER1Q8TDS5 423 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 LPAR1Q92633 364 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 ELP3Q9H9T3 547 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 SH3GLB2Q9NR46 395 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 TCHHQ07283 1943 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 OFD1O75665 1012 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms