RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 HDAC6Q9UBN7 1215 aa15.21■□□□□ 0.03
SEMA3F-201ENST00000002829 ATP1A2P50993 1020 aa15.21■□□□□ 0.02
SEMA3F-201ENST00000002829 KCTD16Q68DU8 428 aa15.21■□□□□ 0.02
SEMA3F-201ENST00000002829 C2CD5Q86YS7 1000 aa15.21■□□□□ 0.02
SEMA3F-201ENST00000002829 KIAA0825Q8IV33 1275 aa15.21■□□□□ 0.02
SEMA3F-201ENST00000002829 KSR1Q8IVT5 923 aa15.21■□□□□ 0.02
SEMA3F-201ENST00000002829 CTAGE1Q96RT6 745 aa15.21■□□□□ 0.02
SEMA3F-201ENST00000002829 RPN1P04843 607 aaKnown RBP15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 BTDP43251 543 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 DCAF17Q5H9S7 520 aaPredicted RBP15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 NYAP1Q6ZVC0 841 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 SPICE1Q8N0Z3 855 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 FOXP2O15409 715 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 ECM2O94769 699 aaPredicted RBP15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 SYCP1Q15431 976 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 SPATA1Q5VX52 437 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 CC2D1AQ6P1N0 951 aaPredicted RBP15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 CNGA4Q8IV77 575 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 SNX29Q8TEQ0 813 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 PIGSQ96S52 555 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 FOXP1Q9H334 677 aaPredicted RBP15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 C6orf50Q9HD87 102 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 CTDP1Q9Y5B0 961 aaPredicted RBP15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 TNS3Q68CZ2 1445 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 SASH3O75995 380 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 UBXN2AP68543 259 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 SP4Q02446 784 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 UBE2SQ16763 222 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 KCTD1Q719H9 257 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 TMEM260Q9NX78 707 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 LRWD1Q9UFC0 647 aa15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 SRPRBQ9Y5M8 271 aaKnown RBP15.2■□□□□ 0.02
SEMA3F-201ENST00000002829 ODF2Q5BJF6 829 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 MARCH10Q8NA82 808 aaPredicted RBP15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 RDH13Q8NBN7 331 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 ALDH8A1Q9H2A2 487 aaPredicted RBP15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 MRPL44Q9H9J2 332 aaKnown RBP15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 DCP1AQ9NPI6 582 aaPredicted RBP15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 RBM28Q9NW13 759 aaKnown RBP15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 FBXO2Q9UK22 296 aaPredicted RBP15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 WNT7AO00755 349 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 CYP4A11Q02928 519 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 KIF5AQ12840 1032 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 NFIXQ14938 502 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 KRT31Q15323 416 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 RRAGAQ7L523 313 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 ZNF804AQ7Z570 1209 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 CEP89Q96ST8 783 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 CHP1Q99653 195 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 MXD3Q9BW11 206 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 FAM204AQ9H8W3 233 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 VIRMAQ69YN4 1812 aaKnown RBP15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 CDC25BP30305 580 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 RDXP35241 583 aaKnown RBP15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 RBM26Q5T8P6 1007 aaKnown RBP15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 DPP8Q6V1X1 898 aaPredicted RBP15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 PLCD4Q9BRC7 762 aa15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 FAM217BQ9NTX9 383 aaPredicted RBP15.19■□□□□ 0.02
SEMA3F-201ENST00000002829 EFCAB8A8MWE9 144 aa15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 IKBKBO14920 756 aa15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 COPB1P53618 953 aaKnown RBP15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 RAPGEF1Q13905 1077 aa15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 SMCR8Q8TEV9 937 aaPredicted RBP15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 RNF26Q9BY78 433 aaPredicted RBP15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 ZNF287Q9HBT7 754 aa15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 RMND1Q9NWS8 449 aa15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 FEZ2Q9UHY8 353 aaPredicted RBP15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 SCAF8Q9UPN6 1271 aaKnown RBP15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 GOLGA6L9A6NEM1 432 aa15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 CYP2C19P33261 490 aa15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 FXR1P51114 621 aaKnown RBP eCLIP15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 NCAPHQ15003 741 aa15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 PTPAQ15257 358 aa15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 CT47A1Q5JQC4 288 aaPredicted RBP15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 SPAG5Q96R06 1193 aa15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 NAPGQ99747 312 aaPredicted RBP15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 DDX39AO00148 427 aaKnown RBP15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 CD44P16070 742 aaKnown RBP15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 CCT5P48643 541 aa15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 KRT79Q5XKE5 535 aa15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 HDXQ7Z353 690 aa15.18■□□□□ 0.02
SEMA3F-201ENST00000002829 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.17■□□□□ 0.02
SEMA3F-201ENST00000002829 FBXO3Q9UK99 471 aa15.17■□□□□ 0.02
SEMA3F-201ENST00000002829 PRCPP42785 496 aa15.17■□□□□ 0.02
SEMA3F-201ENST00000002829 CEP57Q86XR8 500 aa15.17■□□□□ 0.02
SEMA3F-201ENST00000002829 POTEMA6NI47 508 aa15.17■□□□□ 0.02
SEMA3F-201ENST00000002829 MEIS1O00470 390 aa15.17■□□□□ 0.02
SEMA3F-201ENST00000002829 TRIM28Q13263 835 aaKnown RBP15.17■□□□□ 0.02
SEMA3F-201ENST00000002829 NTRK3Q16288 839 aa15.17■□□□□ 0.02
SEMA3F-201ENST00000002829 HERC4Q5GLZ8 1057 aaPredicted RBP15.17■□□□□ 0.02
SEMA3F-201ENST00000002829 KRT26Q7Z3Y9 468 aa15.17■□□□□ 0.02
SEMA3F-201ENST00000002829 STAG1Q8WVM7 1258 aa15.17■□□□□ 0.02
SEMA3F-201ENST00000002829 FERMT2Q96AC1 680 aa15.17■□□□□ 0.02
SEMA3F-201ENST00000002829 BCS1LQ9Y276 419 aa15.17■□□□□ 0.02
SEMA3F-201ENST00000002829 PSDA5PKW4 1024 aaPredicted RBP15.16■□□□□ 0.02
SEMA3F-201ENST00000002829 USO1O60763 962 aaKnown RBP15.16■□□□□ 0.02
SEMA3F-201ENST00000002829 KIAA0754O94854 1291 aa15.16■□□□□ 0.02
SEMA3F-201ENST00000002829 BMP6P22004 513 aa15.16■□□□□ 0.02
SEMA3F-201ENST00000002829 HPDP32754 393 aaPredicted RBP15.16■□□□□ 0.02
SEMA3F-201ENST00000002829 SPAG1Q07617 926 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms