RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 MslnlQ8C160 685 aa26.1■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Dppa3Q8QZY3 150 aa26.1■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Galntl5Q9D4M9 431 aa26.1■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Tmem132bF7BAB2 1078 aa26.1■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Cfap73J3QPZ5 306 aa26.1■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Znf697Q569E7 569 aa26.1■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Nat10Q8K224 1024 aaKnown RBP26.1■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Ubxn2aQ99KJ0 258 aa26.1■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Myo1hQ9D6A1 958 aa26.1■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Tpm3P21107 285 aaKnown RBP26.09■■□□□ 1.77
Upf3a-201ENSMUST00000043767 OatP29758 439 aa26.09■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Pcmtd1P59913 357 aa26.09■■□□□ 1.77
Upf3a-201ENSMUST00000043767 TbcbQ9D1E6 244 aa26.09■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Fbln1Q08879 705 aa26.08■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Sfi1Q3UZY0 1216 aaKnown RBP26.08■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Cyp7b1Q60991 507 aa26.08■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Slc9a1Q61165 820 aa26.08■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Tmem60Q8K174 133 aa26.08■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Hps3Q91VB4 1002 aa26.08■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Igf2bp3Q9CPN8 579 aaKnown RBP26.08■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Ampd3O08739 766 aa26.08■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Il13ra2O88786 383 aa26.08■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Ptger2Q62053 362 aa26.08■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Epc2Q8C0I4 808 aa26.08■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Oxnad1Q8VE38 311 aa26.08■■□□□ 1.77
Upf3a-201ENSMUST00000043767 ArcQ9WV31 396 aa26.08■■□□□ 1.77
Upf3a-201ENSMUST00000043767 Pappa2E9PZ87 1789 aa26.08■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Zfp853A0A1D5RM95 733 aa26.07■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Lekr1B2RVN1 116 aa26.07■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Tmem191cQ9JJB1 302 aa26.07■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Fzd9Q9R216 592 aa26.07■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Dnaaf5B9EJR8 853 aa26.07■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Has3O08650 554 aa26.07■■□□□ 1.76
Upf3a-201ENSMUST00000043767 MarcksP26645 309 aaKnown RBP26.07■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Gcnt1Q09324 428 aa26.07■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Ttc27Q8CD92 847 aa26.07■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Slc18a1Q8R090 521 aa26.07■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Spon1Q8VCC9 807 aa26.07■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Mettl16Q9CQG2 553 aaKnown RBP26.07■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Usp31E9Q6Y8 1344 aa26.06■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Ktn1Q61595 1327 aaKnown RBP26.06■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Gm43738A0A0G2JEA5 862 aa26.06■■□□□ 1.76
Upf3a-201ENSMUST00000043767 NpcdF8VQB8 469 aa26.06■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Taok2Q6ZQ29 1240 aa26.06■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Grpel1Q99LP6 217 aa26.06■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Aldh1b1Q9CZS1 519 aa26.06■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Hic2Q9JLZ6 619 aaKnown RBP26.06■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Nr2e3Q9QXZ7 395 aa26.06■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Add3Q9QYB5 706 aaKnown RBP26.06■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Acot9Q9R0X4 439 aaKnown RBP26.06■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Frmpd4A2AFR3 1320 aa26.06■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Dnai2A2AC93 623 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Cspp1B2RX88 1205 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Tex13cD3YU32 604 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 MycnP03966 462 aaKnown RBP26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Fgfr2P21803 821 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Irf5P56477 497 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Gprin1Q3UNH4 932 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Sp4Q62445 782 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Fbxo28Q8BIG4 368 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 LRWD1Q8BUI3 648 aaKnown RBP26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Slc4a8Q8JZR6 1089 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Bst2Q8R2Q8 172 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Wdr33Q8K4P0 1330 aaKnown RBP26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Grin1P35438 938 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Atp13a3Q5XF89 1219 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Garem2Q6PAJ3 880 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Spata21Q8BHW6 681 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Defb15Q8R2I5 79 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Gtf3c5Q8R2T8 520 aa26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Telo2Q9DC40 840 aaKnown RBP26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Utp3Q9JI13 469 aaKnown RBP26.05■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Cfap157Q0VFX2 523 aa26.04■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Depdc1aQ8CIG0 804 aa26.04■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Tdrd3Q91W18 743 aaKnown RBP26.04■■□□□ 1.76
Upf3a-201ENSMUST00000043767 A0A0U1RNP2 1173 aa26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Aco1P28271 889 aaKnown RBP26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 DSCC1Q14AI0 399 aa26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Tmem130Q6NXM3 419 aa26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Tcp11l1Q8BTG3 509 aa26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Nod2Q8K3Z0 1020 aa26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 4921524L21RikQ9D5T2 438 aa26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Il21rQ9JHX3 529 aa26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Nlrp5Q9R1M5 1163 aa26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Pcdh15Q99PJ1 1943 aa26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Mmp10O55123 476 aa26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Oxsr1Q6P9R2 527 aa26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Pcdhb14Q6PB90 796 aa26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Vgll2Q8BGW8 322 aa26.03■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Usp25P57080 1055 aa26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Nucb2P81117 420 aa26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Cyp2e1Q05421 493 aa26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Gtf2f1Q3THK3 508 aaKnown RBP26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Tmem109Q3UBX0 243 aa26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Ccdc148Q6P5U8 527 aa26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Plcg2Q8CIH5 1265 aa26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Tdrd1Q99MV1 1172 aa26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Mmel1Q9JLI3 765 aa26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Zkscan7E9PVW1 718 aa26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Gna11P21278 359 aa26.02■■□□□ 1.76
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms