RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 PRR20EP86478 221 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 PRR20CP86479 221 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 PRR20DP86480 221 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 PRR20BP86481 221 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 PRR20AP86496 221 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 PWP1Q13610 501 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 ANO6Q4KMQ2 910 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 PEAR1Q5VY43 1037 aaPredicted RBP6.81□□□□□ -1.32
CASC19-260ENST00000641828 MRPL14Q6P1L8 145 aaKnown RBP6.81□□□□□ -1.32
CASC19-260ENST00000641828 CCDC91Q7Z6B0 441 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 DNAJC5GQ8N7S2 189 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 TRIM56Q9BRZ2 755 aaKnown RBP6.81□□□□□ -1.32
CASC19-260ENST00000641828 SRRTQ9BXP5 876 aaKnown RBP6.81□□□□□ -1.32
CASC19-260ENST00000641828 SLC12A5Q9H2X9 1139 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 TMX1Q9H3N1 280 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 RUBCNLQ9H714 662 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 BTG4Q9NY30 223 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 LCMT1Q9UIC8 334 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.81□□□□□ -1.32
CASC19-260ENST00000641828 NRXN3Q9Y4C0 1643 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 CEP350Q5VT06 3117 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 USP27XA6NNY8 438 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 F6X3S4 739 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 KIF1CO43896 1103 aaKnown RBP6.81□□□□□ -1.32
CASC19-260ENST00000641828 CASTP20810 708 aaKnown RBP6.81□□□□□ -1.32
CASC19-260ENST00000641828 ACTN2P35609 894 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 ZNF165P49910 485 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 FCGRTP55899 365 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 DHX8Q14562 1220 aaKnown RBP6.81□□□□□ -1.32
CASC19-260ENST00000641828 ARHGAP29Q52LW3 1261 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 SAMD5Q5TGI4 173 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 PRPF40BQ6NWY9 871 aaKnown RBP6.81□□□□□ -1.32
CASC19-260ENST00000641828 RBM43Q6ZSC3 357 aaKnown RBP6.81□□□□□ -1.32
CASC19-260ENST00000641828 TRIM67Q6ZTA4 783 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 NLRP8Q86W28 1048 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 RELL1Q8IUW5 271 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 SUGP1Q8IWZ8 645 aaKnown RBP6.81□□□□□ -1.32
CASC19-260ENST00000641828 CCDC144CPQ8IYA2 1237 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 MNS1Q8NEH6 495 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 OTUD7AQ8TE49 926 aaPredicted RBP6.81□□□□□ -1.32
CASC19-260ENST00000641828 SEC16BQ96JE7 1060 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 TNMDQ9H2S6 317 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 ADAMTS1Q9UHI8 967 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 PALD1Q9ULE6 856 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 SMC3Q9UQE7 1217 aa6.81□□□□□ -1.32
CASC19-260ENST00000641828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.81□□□□□ -1.32
CASC19-260ENST00000641828 SPATA31A5Q5VU36 1347 aa6.8□□□□□ -1.32
CASC19-260ENST00000641828 SPATA31A7Q8IWB4 1347 aa6.8□□□□□ -1.32
CASC19-260ENST00000641828 NPHP1O15259 732 aa6.8□□□□□ -1.32
CASC19-260ENST00000641828 SASH3O75995 380 aa6.8□□□□□ -1.32
CASC19-260ENST00000641828 PDE1AP54750 535 aa6.8□□□□□ -1.32
CASC19-260ENST00000641828 GSCP56915 257 aaPredicted RBP6.8□□□□□ -1.32
CASC19-260ENST00000641828 GSDMDP57764 484 aa6.8□□□□□ -1.32
CASC19-260ENST00000641828 MAP3K10Q02779 954 aa6.8□□□□□ -1.32
CASC19-260ENST00000641828 SNW1Q13573 536 aaKnown RBP6.8□□□□□ -1.32
CASC19-260ENST00000641828 SMC1AQ14683 1233 aaKnown RBP6.8□□□□□ -1.32
CASC19-260ENST00000641828 LEKR1Q6ZMV7 388 aa6.8□□□□□ -1.32
CASC19-260ENST00000641828 NOL8Q76FK4 1167 aaKnown RBP6.8□□□□□ -1.32
CASC19-260ENST00000641828 PGBD3Q8N328 593 aa6.8□□□□□ -1.32
CASC19-260ENST00000641828 PPM1EQ8WY54 764 aa6.8□□□□□ -1.32
CASC19-260ENST00000641828 OXCT2Q9BYC2 517 aaPredicted RBP6.8□□□□□ -1.32
CASC19-260ENST00000641828 DDX19AQ9NUU7 478 aaKnown RBP6.8□□□□□ -1.32
CASC19-260ENST00000641828 DONSONQ9NYP3 566 aa6.8□□□□□ -1.32
CASC19-260ENST00000641828 PPM1HQ9ULR3 514 aa6.8□□□□□ -1.32
CASC19-260ENST00000641828 ABCA3Q99758 1704 aa6.8□□□□□ -1.32
CASC19-260ENST00000641828 PHF20L1A8MW92 1017 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 MINDY4BA8MYZ0 360 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 GOLGA6L19H0YKK7 550 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 RPS6KA5O75582 802 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 SSBP05455 408 aaKnown RBP eCLIP6.79□□□□□ -1.32
CASC19-260ENST00000641828 OAS2P29728 719 aaKnown RBP6.79□□□□□ -1.32
CASC19-260ENST00000641828 GBP2P32456 591 aaPredicted RBP6.79□□□□□ -1.32
CASC19-260ENST00000641828 KCNJ6P48051 423 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 GNAI1P63096 354 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 CCZ1BP86790 482 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 CCZ1P86791 482 aaPredicted RBP6.79□□□□□ -1.32
CASC19-260ENST00000641828 CTC1Q2NKJ3 1217 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 SDE2Q6IQ49 451 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 ZNF662Q6ZS27 426 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 KRT28Q7Z3Y7 464 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 KRT25Q7Z3Z0 450 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 RPAINQ86UA6 219 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 REXO1L1PQ8IX06 675 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 CKAP2LQ8IYA6 745 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 CEP120Q8N960 986 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 MTFR1LQ9H019 292 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 ABCB6Q9NP58 842 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 STK32BQ9NY57 414 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 ORC3Q9UBD5 711 aaPredicted RBP6.79□□□□□ -1.32
CASC19-260ENST00000641828 ADAM21Q9UKJ8 722 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 LIMCH1Q9UPQ0 1083 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 CCDC69A6NI79 296 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 EFCAB8A8MWE9 144 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 CCP110O43303 1012 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 HMMRO75330 724 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 F11P03951 625 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 XRCC5P13010 732 aaKnown RBP6.79□□□□□ -1.32
CASC19-260ENST00000641828 HSPA4P34932 840 aa6.79□□□□□ -1.32
CASC19-260ENST00000641828 EIF4A3P38919 411 aaKnown RBP6.79□□□□□ -1.32
CASC19-260ENST00000641828 KCNQ4P56696 695 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms