RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 PRODHO43272 600 aa8.94□□□□□ -0.98
SCARB2-224ENST00000640880 CBFA2T2O43439 604 aa8.94□□□□□ -0.98
SCARB2-224ENST00000640880 FGFR1P11362 822 aa8.94□□□□□ -0.98
SCARB2-224ENST00000640880 PABPC1P11940 636 aaKnown RBP8.94□□□□□ -0.98
SCARB2-224ENST00000640880 EXOSC6Q5RKV6 272 aaKnown RBP8.94□□□□□ -0.98
SCARB2-224ENST00000640880 DCAF15Q66K64 600 aa8.94□□□□□ -0.98
SCARB2-224ENST00000640880 CDC37L1Q7L3B6 337 aa8.94□□□□□ -0.98
SCARB2-224ENST00000640880 DMRTC2Q8IXT2 367 aaPredicted RBP8.94□□□□□ -0.98
SCARB2-224ENST00000640880 RAVER1Q8IY67 606 aaKnown RBP8.94□□□□□ -0.98
SCARB2-224ENST00000640880 AFAP1L2Q8N4X5 818 aa8.94□□□□□ -0.98
SCARB2-224ENST00000640880 CCDC136Q96JN2 1154 aa8.94□□□□□ -0.98
SCARB2-224ENST00000640880 ZNF512BQ96KM6 892 aaPredicted RBP8.94□□□□□ -0.98
SCARB2-224ENST00000640880 GBP3Q9H0R5 595 aa8.94□□□□□ -0.98
SCARB2-224ENST00000640880 INTS7Q9NVH2 962 aaKnown RBP8.94□□□□□ -0.98
SCARB2-224ENST00000640880 SFMBT1Q9UHJ3 866 aa8.94□□□□□ -0.98
SCARB2-224ENST00000640880 FHOD3Q2V2M9 1422 aa8.94□□□□□ -0.98
SCARB2-224ENST00000640880 DNAJC25-GNG10A0A024R161 153 aa8.93□□□□□ -0.98
SCARB2-224ENST00000640880 SPDYE3A6NKU9 549 aa8.93□□□□□ -0.98
SCARB2-224ENST00000640880 GRIA2P42262 883 aa8.93□□□□□ -0.98
SCARB2-224ENST00000640880 PRAMEF13Q5VWM6 474 aa8.93□□□□□ -0.98
SCARB2-224ENST00000640880 NSMFQ6X4W1 530 aa8.93□□□□□ -0.98
SCARB2-224ENST00000640880 CHSY3Q70JA7 882 aa8.93□□□□□ -0.98
SCARB2-224ENST00000640880 ADAT2Q7Z6V5 191 aaKnown RBP8.93□□□□□ -0.98
SCARB2-224ENST00000640880 CYB5D2Q8WUJ1 264 aa8.93□□□□□ -0.98
SCARB2-224ENST00000640880 FANCD2OSQ96PS1 177 aa8.93□□□□□ -0.98
SCARB2-224ENST00000640880 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.93□□□□□ -0.98
SCARB2-224ENST00000640880 DISC1Q9NRI5 854 aa8.93□□□□□ -0.98
SCARB2-224ENST00000640880 AP4E1Q9UPM8 1137 aa8.93□□□□□ -0.98
SCARB2-224ENST00000640880 FMN1Q68DA7 1419 aa8.93□□□□□ -0.98
SCARB2-224ENST00000640880 UHRF1BP1LA0JNW5 1464 aa8.93□□□□□ -0.98
SCARB2-224ENST00000640880 ZCCHC11Q5TAX3 1644 aaKnown RBP8.92□□□□□ -0.98
SCARB2-224ENST00000640880 HECW1Q76N89 1606 aa8.92□□□□□ -0.98
SCARB2-224ENST00000640880 CLIP1P30622 1438 aa8.92□□□□□ -0.98
SCARB2-224ENST00000640880 TBX1O43435 398 aa8.92□□□□□ -0.98
SCARB2-224ENST00000640880 MAP7Q14244 749 aa8.92□□□□□ -0.98
SCARB2-224ENST00000640880 UBE3DQ7Z6J8 389 aa8.92□□□□□ -0.98
SCARB2-224ENST00000640880 ZNF513Q8N8E2 541 aaPredicted RBP8.92□□□□□ -0.98
SCARB2-224ENST00000640880 KCT2Q8NC54 265 aa8.92□□□□□ -0.98
SCARB2-224ENST00000640880 OSBP2Q969R2 916 aa8.92□□□□□ -0.98
SCARB2-224ENST00000640880 ANP32EQ9BTT0 268 aa8.92□□□□□ -0.98
SCARB2-224ENST00000640880 MKRN2Q9H000 416 aaKnown RBP8.92□□□□□ -0.98
SCARB2-224ENST00000640880 ATXN3LQ9H3M9 355 aa8.92□□□□□ -0.98
SCARB2-224ENST00000640880 ABCA8O94911 1581 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 PLB1Q6P1J6 1458 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 ARHGAP35Q9NRY4 1499 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 WASHC2CQ9Y4E1 1318 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 DEAF1O75398 565 aaPredicted RBP8.91□□□□□ -0.98
SCARB2-224ENST00000640880 ALDH1L1O75891 902 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 NEFMP07197 916 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 GUCY2FP51841 1108 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 SLBPQ14493 270 aaKnown RBP eCLIP8.91□□□□□ -0.98
SCARB2-224ENST00000640880 TTLL4Q14679 1199 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 DUOXA2Q1HG44 320 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 RNFT1Q5M7Z0 435 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 C1orf229Q6ZS94 237 aaPredicted RBP8.91□□□□□ -0.98
SCARB2-224ENST00000640880 STRA8Q7Z7C7 330 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 BVESQ8NE79 360 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 RIN3Q8TB24 985 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 LEO1Q8WVC0 666 aaPredicted RBP8.91□□□□□ -0.98
SCARB2-224ENST00000640880 NDOR1Q9UHB4 597 aa8.91□□□□□ -0.98
SCARB2-224ENST00000640880 MAPKBP1O60336 1514 aa8.9□□□□□ -0.98
SCARB2-224ENST00000640880 NOP56O00567 594 aaKnown RBP8.9□□□□□ -0.98
SCARB2-224ENST00000640880 PPM1BO75688 479 aa8.9□□□□□ -0.98
SCARB2-224ENST00000640880 DNAJC8O75937 253 aaPredicted RBP8.9□□□□□ -0.98
SCARB2-224ENST00000640880 CST3P01034 146 aaPredicted RBP8.9□□□□□ -0.98
SCARB2-224ENST00000640880 CPEP16870 476 aa8.9□□□□□ -0.98
SCARB2-224ENST00000640880 TBX4P57082 545 aa8.9□□□□□ -0.98
SCARB2-224ENST00000640880 DDX46Q7L014 1031 aaKnown RBP8.9□□□□□ -0.98
SCARB2-224ENST00000640880 CCDC146Q8IYE0 955 aa8.9□□□□□ -0.98
SCARB2-224ENST00000640880 PPM1KQ8N3J5 372 aa8.9□□□□□ -0.98
SCARB2-224ENST00000640880 XAGE3Q8WTP9 111 aa8.9□□□□□ -0.98
SCARB2-224ENST00000640880 EDARADDQ8WWZ3 215 aa8.9□□□□□ -0.98
SCARB2-224ENST00000640880 DDX1Q92499 740 aaKnown RBP8.9□□□□□ -0.98
SCARB2-224ENST00000640880 ACDQ96AP0 544 aa8.9□□□□□ -0.98
SCARB2-224ENST00000640880 ZNF775Q96BV0 537 aaPredicted RBP8.9□□□□□ -0.98
SCARB2-224ENST00000640880 COL25A1Q9BXS0 654 aaPredicted RBP8.9□□□□□ -0.98
SCARB2-224ENST00000640880 PRDM6Q9NQX0 595 aa8.9□□□□□ -0.98
SCARB2-224ENST00000640880 ZNF451Q9Y4E5 1061 aa8.9□□□□□ -0.98
SCARB2-224ENST00000640880 TTF1Q15361 905 aaPredicted RBP8.89□□□□□ -0.99
SCARB2-224ENST00000640880 TRIM61Q5EBN2 209 aa8.89□□□□□ -0.99
SCARB2-224ENST00000640880 BRAPQ7Z569 592 aa8.89□□□□□ -0.99
SCARB2-224ENST00000640880 GALNT6Q8NCL4 622 aa8.89□□□□□ -0.99
SCARB2-224ENST00000640880 PSMD1Q99460 953 aa8.89□□□□□ -0.99
SCARB2-224ENST00000640880 TMPRSS13Q9BYE2 586 aa8.89□□□□□ -0.99
SCARB2-224ENST00000640880 TRIM39Q9HCM9 518 aa8.89□□□□□ -0.99
SCARB2-224ENST00000640880 WHRNQ9P202 907 aa8.89□□□□□ -0.99
SCARB2-224ENST00000640880 CEP162Q5TB80 1403 aa8.88□□□□□ -0.99
SCARB2-224ENST00000640880 FAM83GA6ND36 823 aa8.88□□□□□ -0.99
SCARB2-224ENST00000640880 RNGTTO60942 597 aaKnown RBP8.88□□□□□ -0.99
SCARB2-224ENST00000640880 KATNA1O75449 491 aa8.88□□□□□ -0.99
SCARB2-224ENST00000640880 CAPNS1P04632 268 aa8.88□□□□□ -0.99
SCARB2-224ENST00000640880 C6orf222P0C671 652 aaPredicted RBP8.88□□□□□ -0.99
SCARB2-224ENST00000640880 ADH5P11766 374 aa8.88□□□□□ -0.99
SCARB2-224ENST00000640880 NID1P14543 1247 aa8.88□□□□□ -0.99
SCARB2-224ENST00000640880 CAP2P40123 477 aa8.88□□□□□ -0.99
SCARB2-224ENST00000640880 SRSF11Q05519 484 aaKnown RBP8.88□□□□□ -0.99
SCARB2-224ENST00000640880 STRN3Q13033 797 aa8.88□□□□□ -0.99
SCARB2-224ENST00000640880 NUTM2GQ5VZR2 741 aa8.88□□□□□ -0.99
SCARB2-224ENST00000640880 ILDR2Q71H61 639 aa8.88□□□□□ -0.99
SCARB2-224ENST00000640880 AHI1Q8N157 1196 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms