RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 PPP2R5AQ15172 486 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 LONRF3Q496Y0 759 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 ZNF658Q5TYW1 1059 aaPredicted RBP5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 LRIG3Q6UXM1 1119 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 PNMA8AQ86V59 439 aaPredicted RBP5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 RNF10Q8N5U6 811 aaKnown RBP5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 TC2NQ8N9U0 490 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 WDR66Q8TBY9 1149 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 CTNNBL1Q8WYA6 563 aaPredicted RBP5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 PBKQ96KB5 322 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 RUNDC3BQ96NL0 473 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 ABHD10Q9NUJ1 306 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 NKIRAS1Q9NYS0 192 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 HDAC9Q9UKV0 1011 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 GPAA1O43292 621 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 KRT71Q3SY84 523 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 MICAL1Q8TDZ2 1067 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 CDC5LQ99459 802 aaKnown RBP5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 NAP1L4Q99733 375 aaKnown RBP5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 SEC63Q9UGP8 760 aaKnown RBP5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 MTUS1Q9ULD2 1270 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 SAMM50Q9Y512 469 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 ATXN2Q99700 1313 aaKnown RBP5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 HECW2Q9P2P5 1572 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 SHPRHQ149N8 1683 aa5.57□□□□□ -1.52
HNRNPU-230ENST00000640657 GMNCA6NCL1 334 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 NDC80O14777 642 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 IFNAR1P17181 557 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 IGHMBP2P38935 993 aaKnown RBP5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 NT5C2P49902 561 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 ATP1A2P50993 1020 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 SMTNP53814 917 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 LMNB2Q03252 620 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 PDE4BQ07343 736 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 CETN1Q12798 172 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 CCDC152Q4G0S7 254 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 LDHAL6AQ6ZMR3 332 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 ARHGAP24Q8N264 748 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 MMGT1Q8N4V1 131 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 USHBP1Q8N6Y0 703 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 TBC1D5Q92609 795 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 FTOQ9C0B1 505 aaKnown RBP eCLIP5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 LIMA1Q9UHB6 759 aaKnown RBP5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 AMOTL2Q9Y2J4 779 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 DLC1Q96QB1 1528 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 MINDY4BA8MYZ0 360 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 TMEM232C9JQI7 657 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 MPHOSPH10O00566 681 aaKnown RBP5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 SASH1O94885 1247 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 STARD3NLO95772 234 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 PDE6BP35913 854 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 LIFRP42702 1097 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 SFMBT2Q5VUG0 894 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 TTLL7Q6ZT98 887 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 STXBP4Q6ZWJ1 553 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 NLRP14Q86W24 1093 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 CCDC82Q8N4S0 544 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 ACRBPQ8NEB7 543 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 TCP11Q8WWU5 503 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 SEC62Q99442 399 aaKnown RBP5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 SAMSN1Q9NSI8 373 aaKnown RBP5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 VWDEQ8N2E2 1590 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 WDR17Q8IZU2 1322 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 EVI5O60447 810 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 RANBP6O60518 1105 aaKnown RBP5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 SUN1O94901 812 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 RPN1P04843 607 aaKnown RBP5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 PARP1P09874 1014 aaKnown RBP5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 PCP11498 1178 aaKnown RBP5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 ASIC2Q16515 512 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 ESCO1Q5FWF5 840 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 GALNT17Q6IS24 598 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 SV2BQ7L1I2 683 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 ANKRD27Q96NW4 1050 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 CLIC6Q96NY7 704 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 KAT14Q9H8E8 782 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 DBNLQ9UJU6 430 aaKnown RBP5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 BZW2Q9Y6E2 419 aaKnown RBP5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 NEO1Q92859 1461 aa5.56□□□□□ -1.52
HNRNPU-230ENST00000640657 ABCC12Q96J65 1359 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 LAD1O00515 517 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 PPP1R37O75864 691 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 ATP5HO75947 161 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 MMP1P03956 469 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 POTEJP0CG39 1038 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 DNA2P51530 1060 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 PDE4DQ08499 809 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 GOLGA8FQ08AF8 430 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 GOLGA8DPQ0D2H9 430 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 ZNF174Q15697 407 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 TCP11X2Q5H9J9 407 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 DENND2CQ68D51 928 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 NCAPH2Q6IBW4 605 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 YTHDF3Q7Z739 585 aaKnown RBP5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 FBXL16Q8N461 479 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 MB21D1Q8N884 522 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 EDEM3Q9BZQ6 932 aa5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 A1CFQ9NQ94 594 aaKnown RBP5.55□□□□□ -1.52
HNRNPU-230ENST00000640657 B4E1Z4 1266 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms