RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 PRAMEF1O95521 474 aa8.2□□□□□ -1.1
CCDC7-216ENST00000640058 ACRP10323 421 aa8.2□□□□□ -1.1
CCDC7-216ENST00000640058 CCDC81Q6ZN84 652 aa8.2□□□□□ -1.1
CCDC7-216ENST00000640058 SYTL5Q8TDW5 730 aaPredicted RBP8.2□□□□□ -1.1
CCDC7-216ENST00000640058 TCTN2Q96GX1 697 aa8.2□□□□□ -1.1
CCDC7-216ENST00000640058 DIRC2Q96SL1 478 aa8.2□□□□□ -1.1
CCDC7-216ENST00000640058 KIAA1522Q9P206 1035 aaPredicted RBP8.2□□□□□ -1.1
CCDC7-216ENST00000640058 FKTNO75072 461 aa8.19□□□□□ -1.1
CCDC7-216ENST00000640058 RPL10P27635 214 aaKnown RBP8.19□□□□□ -1.1
CCDC7-216ENST00000640058 CCNFP41002 786 aa8.19□□□□□ -1.1
CCDC7-216ENST00000640058 HDLBPQ00341 1268 aaKnown RBP8.19□□□□□ -1.1
CCDC7-216ENST00000640058 TDRD10Q5VZ19 366 aaKnown RBP8.19□□□□□ -1.1
CCDC7-216ENST00000640058 NT5DC4Q86YG4 428 aa8.19□□□□□ -1.1
CCDC7-216ENST00000640058 KSR1Q8IVT5 923 aa8.19□□□□□ -1.1
CCDC7-216ENST00000640058 USHBP1Q8N6Y0 703 aa8.19□□□□□ -1.1
CCDC7-216ENST00000640058 RGS22Q8NE09 1264 aa8.19□□□□□ -1.1
CCDC7-216ENST00000640058 PDZD8Q8NEN9 1154 aa8.19□□□□□ -1.1
CCDC7-216ENST00000640058 GINM1Q9NU53 330 aa8.19□□□□□ -1.1
CCDC7-216ENST00000640058 FAM53CQ9NYF3 392 aa8.19□□□□□ -1.1
CCDC7-216ENST00000640058 EBF1Q9UH73 591 aa8.19□□□□□ -1.1
CCDC7-216ENST00000640058 FBXL21Q9UKT6 434 aa8.19□□□□□ -1.1
CCDC7-216ENST00000640058 SSU72P8A0A1W2PR75 194 aa8.18□□□□□ -1.1
CCDC7-216ENST00000640058 IMPDH2P12268 514 aa8.18□□□□□ -1.1
CCDC7-216ENST00000640058 TIGD5Q53EQ6 642 aa8.18□□□□□ -1.1
CCDC7-216ENST00000640058 RUFY4Q6ZNE9 571 aa8.18□□□□□ -1.1
CCDC7-216ENST00000640058 DAGLBQ8NCG7 672 aa8.18□□□□□ -1.1
CCDC7-216ENST00000640058 ENOX1Q8TC92 643 aaKnown RBP8.18□□□□□ -1.1
CCDC7-216ENST00000640058 DHX38Q92620 1227 aaKnown RBP8.18□□□□□ -1.1
CCDC7-216ENST00000640058 RNF32Q9H0A6 362 aa8.18□□□□□ -1.1
CCDC7-216ENST00000640058 NSUN3Q9H649 340 aaKnown RBP8.18□□□□□ -1.1
CCDC7-216ENST00000640058 KCNK12Q9HB15 430 aa8.18□□□□□ -1.1
CCDC7-216ENST00000640058 FAM86C1Q9NVL1 165 aa8.18□□□□□ -1.1
CCDC7-216ENST00000640058 GFOD1Q9NXC2 390 aa8.18□□□□□ -1.1
CCDC7-216ENST00000640058 C9IYK1 514 aa8.17□□□□□ -1.1
CCDC7-216ENST00000640058 SYPP08247 313 aa8.17□□□□□ -1.1
CCDC7-216ENST00000640058 MESP2Q0VG99 397 aa8.17□□□□□ -1.1
CCDC7-216ENST00000640058 ZPBP2Q6X784 338 aa8.17□□□□□ -1.1
CCDC7-216ENST00000640058 WAPLQ7Z5K2 1190 aa8.17□□□□□ -1.1
CCDC7-216ENST00000640058 OXR1Q8N573 874 aa8.17□□□□□ -1.1
CCDC7-216ENST00000640058 SLC38A3Q99624 504 aa8.17□□□□□ -1.1
CCDC7-216ENST00000640058 SP110Q9HB58 689 aa8.17□□□□□ -1.1
CCDC7-216ENST00000640058 CHST7Q9NS84 486 aa8.17□□□□□ -1.1
CCDC7-216ENST00000640058 ZMYM5Q9UJ78 669 aa8.17□□□□□ -1.1
CCDC7-216ENST00000640058 TCFL5Q9UL49 500 aa8.17□□□□□ -1.1
CCDC7-216ENST00000640058 EFR3BQ9Y2G0 817 aa8.17□□□□□ -1.1
CCDC7-216ENST00000640058 PCDHB12Q9Y5F1 795 aa8.17□□□□□ -1.1
CCDC7-216ENST00000640058 SIGLEC6O43699 453 aa8.16□□□□□ -1.1
CCDC7-216ENST00000640058 GALK1P51570 392 aa8.16□□□□□ -1.1
CCDC7-216ENST00000640058 PCBP3P57721 371 aaKnown RBP8.16□□□□□ -1.1
CCDC7-216ENST00000640058 ZYXQ15942 572 aaKnown RBP8.16□□□□□ -1.1
CCDC7-216ENST00000640058 RNF111Q6ZNA4 994 aa8.16□□□□□ -1.1
CCDC7-216ENST00000640058 CCDC144CPQ8IYA2 1237 aa8.16□□□□□ -1.1
CCDC7-216ENST00000640058 ZNF655Q8N720 491 aaPredicted RBP8.16□□□□□ -1.1
CCDC7-216ENST00000640058 FAM84AQ96KN4 292 aa8.16□□□□□ -1.1
CCDC7-216ENST00000640058 SUCOQ9UBS9 1254 aaKnown RBP8.16□□□□□ -1.1
CCDC7-216ENST00000640058 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.16□□□□□ -1.1
CCDC7-216ENST00000640058 FITM1A5D6W6 292 aa8.15□□□□□ -1.1
CCDC7-216ENST00000640058 USP2O75604 605 aaPredicted RBP8.15□□□□□ -1.1
CCDC7-216ENST00000640058 DUSP4Q13115 394 aa8.15□□□□□ -1.1
CCDC7-216ENST00000640058 AUHQ13825 339 aaKnown RBP8.15□□□□□ -1.1
CCDC7-216ENST00000640058 PKN1Q16512 942 aa8.15□□□□□ -1.1
CCDC7-216ENST00000640058 BBS9Q3SYG4 887 aa8.15□□□□□ -1.1
CCDC7-216ENST00000640058 LSRQ86X29 649 aaPredicted RBP8.15□□□□□ -1.1
CCDC7-216ENST00000640058 G6PC3Q9BUM1 346 aa8.15□□□□□ -1.1
CCDC7-216ENST00000640058 GPR160Q9UJ42 338 aa8.15□□□□□ -1.1
CCDC7-216ENST00000640058 PPFIBP1Q86W92 1011 aa8.14□□□□□ -1.11
CCDC7-216ENST00000640058 GPRASP2Q96D09 838 aa8.14□□□□□ -1.11
CCDC7-216ENST00000640058 DHRS1Q96LJ7 313 aa8.14□□□□□ -1.11
CCDC7-216ENST00000640058 TM9SF2Q99805 663 aa8.14□□□□□ -1.11
CCDC7-216ENST00000640058 TMEM82A0PJX8 343 aa8.13□□□□□ -1.11
CCDC7-216ENST00000640058 TP53P04637 393 aaPredicted RBP8.13□□□□□ -1.11
CCDC7-216ENST00000640058 GUCY2CP25092 1073 aa8.13□□□□□ -1.11
CCDC7-216ENST00000640058 DCAF15Q66K64 600 aa8.13□□□□□ -1.11
CCDC7-216ENST00000640058 INTS3Q68E01 1043 aaKnown RBP8.13□□□□□ -1.11
CCDC7-216ENST00000640058 CRTC3Q6UUV7 619 aa8.13□□□□□ -1.11
CCDC7-216ENST00000640058 UNC5AQ6ZN44 842 aa8.13□□□□□ -1.11
CCDC7-216ENST00000640058 SYDE1Q6ZW31 735 aaPredicted RBP8.13□□□□□ -1.11
CCDC7-216ENST00000640058 LILRA2Q8N149 483 aa8.13□□□□□ -1.11
CCDC7-216ENST00000640058 ANKS4BQ8N8V4 417 aa8.13□□□□□ -1.11
CCDC7-216ENST00000640058 LINC00116Q8NCU8 138 aa8.13□□□□□ -1.11
CCDC7-216ENST00000640058 LINC01599Q8WXQ3 324 aa8.13□□□□□ -1.11
CCDC7-216ENST00000640058 CRBNQ96SW2 442 aa8.13□□□□□ -1.11
CCDC7-216ENST00000640058 EPB41L4BQ9H329 900 aa8.13□□□□□ -1.11
CCDC7-216ENST00000640058 DCP1AQ9NPI6 582 aaPredicted RBP8.13□□□□□ -1.11
CCDC7-216ENST00000640058 SHOXO15266 292 aa8.12□□□□□ -1.11
CCDC7-216ENST00000640058 PSPNO60542 156 aa8.12□□□□□ -1.11
CCDC7-216ENST00000640058 PMS1P54277 932 aaKnown RBP8.12□□□□□ -1.11
CCDC7-216ENST00000640058 CHRNEQ04844 493 aa8.12□□□□□ -1.11
CCDC7-216ENST00000640058 SPPL2CQ8IUH8 684 aa8.12□□□□□ -1.11
CCDC7-216ENST00000640058 SIRT2Q8IXJ6 389 aa8.12□□□□□ -1.11
CCDC7-216ENST00000640058 C7orf61Q8IZ16 206 aa8.12□□□□□ -1.11
CCDC7-216ENST00000640058 DSCC1Q9BVC3 393 aa8.12□□□□□ -1.11
CCDC7-216ENST00000640058 CTSKP43235 329 aa8.11□□□□□ -1.11
CCDC7-216ENST00000640058 NR0B2Q15466 257 aa8.11□□□□□ -1.11
CCDC7-216ENST00000640058 AXDND1Q5T1B0 1012 aaPredicted RBP8.11□□□□□ -1.11
CCDC7-216ENST00000640058 CEP128Q6ZU80 1094 aa8.11□□□□□ -1.11
CCDC7-216ENST00000640058 TAB3Q8N5C8 712 aaPredicted RBP8.11□□□□□ -1.11
CCDC7-216ENST00000640058 RBBP8NLQ8NC74 664 aaPredicted RBP8.11□□□□□ -1.11
CCDC7-216ENST00000640058 FBXO15Q8NCQ5 510 aaPredicted RBP8.11□□□□□ -1.11
CCDC7-216ENST00000640058 MAP6Q96JE9 813 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms