RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 RCCD1A6NED2 376 aa23.06■■□□□ 1.28
PMS1-222ENST00000639501 PRKAB2O43741 272 aa23.06■■□□□ 1.28
PMS1-222ENST00000639501 MBD4O95243 580 aa23.06■■□□□ 1.28
PMS1-222ENST00000639501 UBXN1Q04323 297 aa23.06■■□□□ 1.28
PMS1-222ENST00000639501 AKNAD1Q5T1N1 836 aa23.06■■□□□ 1.28
PMS1-222ENST00000639501 PAPD7Q5XG87 772 aaKnown RBP23.06■■□□□ 1.28
PMS1-222ENST00000639501 CERKQ8TCT0 537 aa23.06■■□□□ 1.28
PMS1-222ENST00000639501 ARMT1Q9H993 441 aa23.06■■□□□ 1.28
PMS1-222ENST00000639501 FBXO3Q9UK99 471 aa23.06■■□□□ 1.28
PMS1-222ENST00000639501 ZNF330Q9Y3S2 320 aaPredicted RBP23.06■■□□□ 1.28
PMS1-222ENST00000639501 LOC102724159A0A0B4J2E5 919 aa23.06■■□□□ 1.28
PMS1-222ENST00000639501 TCIRG1Q13488 830 aa23.06■■□□□ 1.28
PMS1-222ENST00000639501 WTAPQ15007 396 aa23.06■■□□□ 1.28
PMS1-222ENST00000639501 PWP2Q15269 919 aaKnown RBP23.06■■□□□ 1.28
PMS1-222ENST00000639501 TTF1Q15361 905 aaPredicted RBP23.06■■□□□ 1.28
PMS1-222ENST00000639501 CCDC122Q5T0U0 273 aa23.06■■□□□ 1.28
PMS1-222ENST00000639501 WDR59Q6PJI9 974 aa23.06■■□□□ 1.28
PMS1-222ENST00000639501 IRAK1P51617 712 aa23.05■■□□□ 1.28
PMS1-222ENST00000639501 C2orf54Q08AI8 447 aa23.05■■□□□ 1.28
PMS1-222ENST00000639501 MMS22LQ6ZRQ5 1243 aa23.05■■□□□ 1.28
PMS1-222ENST00000639501 JAKMIP2Q96AA8 810 aa23.05■■□□□ 1.28
PMS1-222ENST00000639501 CRACR2AQ9BSW2 395 aa23.05■■□□□ 1.28
PMS1-222ENST00000639501 GNL3LQ9NVN8 582 aaKnown RBP23.05■■□□□ 1.28
PMS1-222ENST00000639501 TIAM2Q8IVF5 1701 aa23.05■■□□□ 1.28
PMS1-222ENST00000639501 TARSL2A2RTX5 802 aaKnown RBP23.05■■□□□ 1.28
PMS1-222ENST00000639501 EIF5P55010 431 aaKnown RBP23.05■■□□□ 1.28
PMS1-222ENST00000639501 PAK1Q13153 545 aa23.05■■□□□ 1.28
PMS1-222ENST00000639501 SUGP1Q8IWZ8 645 aaKnown RBP23.05■■□□□ 1.28
PMS1-222ENST00000639501 FAM76AQ8TAV0 307 aa23.05■■□□□ 1.28
PMS1-222ENST00000639501 NELFBQ8WX92 580 aa23.05■■□□□ 1.28
PMS1-222ENST00000639501 HAUS4Q9H6D7 363 aa23.05■■□□□ 1.28
PMS1-222ENST00000639501 RWDD2AQ9UIY3 292 aa23.05■■□□□ 1.28
PMS1-222ENST00000639501 COL22A1Q8NFW1 1626 aaPredicted RBP23.04■■□□□ 1.28
PMS1-222ENST00000639501 GRIN2DO15399 1336 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 GOLGA6CA6NDK9 693 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 GOLGA6DP0CG33 693 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 TRIM14Q14142 442 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 ZNF174Q15697 407 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 ALX1Q15699 326 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 LACRTQ9GZZ8 138 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 GOLGA6AQ9NYA3 693 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 GDAQ9Y2T3 454 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 TRIM49BA6NDI0 452 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 PATL2C9JE40 543 aaKnown RBP23.04■■□□□ 1.28
PMS1-222ENST00000639501 CCNI2Q6ZMN8 369 aaPredicted RBP23.04■■□□□ 1.28
PMS1-222ENST00000639501 LDHAL6AQ6ZMR3 332 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 IRF2BP1Q8IU81 584 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 ZNF654Q8IZM8 581 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 TTLL11Q8NHH1 800 aa23.04■■□□□ 1.28
PMS1-222ENST00000639501 RRP36Q96EU6 259 aaKnown RBP23.04■■□□□ 1.28
PMS1-222ENST00000639501 CSF1RP07333 972 aa23.03■■□□□ 1.28
PMS1-222ENST00000639501 EZH2Q15910 746 aaKnown RBP23.03■■□□□ 1.28
PMS1-222ENST00000639501 TTC19Q6DKK2 380 aaPredicted RBP23.03■■□□□ 1.28
PMS1-222ENST00000639501 MFSD6Q6ZSS7 791 aa23.03■■□□□ 1.28
PMS1-222ENST00000639501 FANCBQ8NB91 859 aa23.03■■□□□ 1.28
PMS1-222ENST00000639501 DEF6Q9H4E7 631 aa23.03■■□□□ 1.28
PMS1-222ENST00000639501 GREM2Q9H772 168 aa23.03■■□□□ 1.28
PMS1-222ENST00000639501 FAM169AQ9Y6X4 670 aa23.03■■□□□ 1.28
PMS1-222ENST00000639501 COL5A2P05997 1499 aaPredicted RBP23.03■■□□□ 1.28
PMS1-222ENST00000639501 VGLL2Q8N8G2 317 aa23.03■■□□□ 1.28
PMS1-222ENST00000639501 DUSP10Q9Y6W6 482 aa23.03■■□□□ 1.28
PMS1-222ENST00000639501 GSG1L2A8MUP6 293 aa23.02■■□□□ 1.28
PMS1-222ENST00000639501 ERLIN2O94905 339 aa23.02■■□□□ 1.28
PMS1-222ENST00000639501 MCM3P25205 808 aa23.02■■□□□ 1.28
PMS1-222ENST00000639501 PKN1Q16512 942 aa23.02■■□□□ 1.28
PMS1-222ENST00000639501 MAGEB6Q8N7X4 407 aa23.02■■□□□ 1.28
PMS1-222ENST00000639501 NCAPGQ9BPX3 1015 aa23.02■■□□□ 1.28
PMS1-222ENST00000639501 KCPQ6ZWJ8 1503 aa23.02■■□□□ 1.28
PMS1-222ENST00000639501 GOLGA6BA6NDN3 693 aa23.02■■□□□ 1.27
PMS1-222ENST00000639501 MRPS25P82663 173 aaKnown RBP23.02■■□□□ 1.27
PMS1-222ENST00000639501 FBXW10Q5XX13 1052 aa23.02■■□□□ 1.27
PMS1-222ENST00000639501 PDXDC2PQ6P474 469 aa23.02■■□□□ 1.27
PMS1-222ENST00000639501 OR8K1Q8NGG5 319 aa23.02■■□□□ 1.27
PMS1-222ENST00000639501 DNAJC7Q99615 494 aa23.02■■□□□ 1.27
PMS1-222ENST00000639501 SMIM22K7EJ46 135 aa23.01■■□□□ 1.27
PMS1-222ENST00000639501 ITGA6P23229 1130 aa23.01■■□□□ 1.27
PMS1-222ENST00000639501 KCNV1Q6PIU1 500 aa23.01■■□□□ 1.27
PMS1-222ENST00000639501 CAGE1Q8TC20 777 aa23.01■■□□□ 1.27
PMS1-222ENST00000639501 HDAC7Q8WUI4 952 aa23.01■■□□□ 1.27
PMS1-222ENST00000639501 KRT23Q9C075 422 aa23.01■■□□□ 1.27
PMS1-222ENST00000639501 CNNM2Q9H8M5 875 aa23.01■■□□□ 1.27
PMS1-222ENST00000639501 UBR2Q8IWV8 1755 aa23.01■■□□□ 1.27
PMS1-222ENST00000639501 MYH2Q9UKX2 1941 aa23.01■■□□□ 1.27
PMS1-222ENST00000639501 SPAG1Q07617 926 aa23.01■■□□□ 1.27
PMS1-222ENST00000639501 TOM1L2Q6ZVM7 507 aa23.01■■□□□ 1.27
PMS1-222ENST00000639501 AENQ8WTP8 325 aaKnown RBP23.01■■□□□ 1.27
PMS1-222ENST00000639501 PHF20Q9BVI0 1012 aa23.01■■□□□ 1.27
PMS1-222ENST00000639501 PRCPP42785 496 aa23■■□□□ 1.27
PMS1-222ENST00000639501 PMS1P54277 932 aaKnown RBP23■■□□□ 1.27
PMS1-222ENST00000639501 PPARAQ07869 468 aa23■■□□□ 1.27
PMS1-222ENST00000639501 MCTP2Q6DN12 878 aa23■■□□□ 1.27
PMS1-222ENST00000639501 ZNF512BQ96KM6 892 aaPredicted RBP23■■□□□ 1.27
PMS1-222ENST00000639501 PARP1P09874 1014 aaKnown RBP23■■□□□ 1.27
PMS1-222ENST00000639501 KRT2P35908 639 aa23■■□□□ 1.27
PMS1-222ENST00000639501 MB21D1Q8N884 522 aa23■■□□□ 1.27
PMS1-222ENST00000639501 BCAS4Q8TDM0 211 aa23■■□□□ 1.27
PMS1-222ENST00000639501 STAG1Q8WVM7 1258 aa23■■□□□ 1.27
PMS1-222ENST00000639501 FERMT2Q96AC1 680 aa23■■□□□ 1.27
PMS1-222ENST00000639501 CNNM1Q9NRU3 951 aa23■■□□□ 1.27
PMS1-222ENST00000639501 PES1O00541 588 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms