RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 LRRIQ3A6PVS8 624 aaPredicted RBP12.32□□□□□ -0.44
SNIP1-204ENST00000638725 KCNJ18B7U540 433 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 KCNJ12Q14500 433 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 TCP11X2Q5H9J9 407 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 PDXDC2PQ6P474 469 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 LEKR1Q6ZMV7 388 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 C10orf67Q8IYJ2 551 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 IQUBQ8NA54 791 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 NELFBQ8WX92 580 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 RWDD2AQ9UIY3 292 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 SOS2Q07890 1332 aaPredicted RBP12.32□□□□□ -0.44
SNIP1-204ENST00000638725 SLIT2O94813 1529 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 TUBB4BP68371 445 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 IFIT1BQ5T764 474 aaKnown RBP12.32□□□□□ -0.44
SNIP1-204ENST00000638725 DZIP3Q86Y13 1208 aaKnown RBP12.32□□□□□ -0.44
SNIP1-204ENST00000638725 MSL3Q8N5Y2 521 aaKnown RBP12.32□□□□□ -0.44
SNIP1-204ENST00000638725 ZSCAN10Q96SZ4 725 aaPredicted RBP12.32□□□□□ -0.44
SNIP1-204ENST00000638725 GBP3Q9H0R5 595 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 BRMS1Q9HCU9 246 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 MYO1AQ9UBC5 1043 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 GDAQ9Y2T3 454 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 STRCP1A6NGW2 1772 aa12.32□□□□□ -0.44
SNIP1-204ENST00000638725 ENC1O14682 589 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 UBXN1Q04323 297 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 SPAG1Q07617 926 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 PPP2R5BQ15173 497 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 ABCF2Q9UG63 623 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 TFR2Q9UP52 801 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 NUP98P52948 1817 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 MYH2Q9UKX2 1941 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 ADAMTS3O15072 1205 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 GTPBP6O43824 516 aaPredicted RBP12.31□□□□□ -0.44
SNIP1-204ENST00000638725 NDUFA10O95299 355 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 MCM7P33993 719 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 EVA1CP58658 441 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 TRIM14Q14142 442 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 IL17AQ16552 155 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 FOXR1Q6PIV2 292 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 PIK3AP1Q6ZUJ8 805 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 CATIPQ7Z7H3 387 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 SRLQ86TD4 932 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 ANKRD20A12PQ8NF67 263 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 HDAC6Q9UBN7 1215 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 EPN1Q9Y6I3 576 aaPredicted RBP12.31□□□□□ -0.44
SNIP1-204ENST00000638725 PLCH1Q4KWH8 1693 aa12.31□□□□□ -0.44
SNIP1-204ENST00000638725 TRIM49BA6NDI0 452 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 TROAPQ12815 778 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 HSP90B2PQ58FF3 399 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 ZNF34Q8IZ26 560 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 RRP15Q9Y3B9 282 aaKnown RBP12.3□□□□□ -0.44
SNIP1-204ENST00000638725 CNTNAP5Q8WYK1 1306 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 MAGEB6P1A0A0J9YX57 407 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 TTC26A0AVF1 554 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 PRCPP42785 496 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 ZNF658Q5TYW1 1059 aaPredicted RBP12.3□□□□□ -0.44
SNIP1-204ENST00000638725 SUSD4Q5VX71 490 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 BRINP3Q76B58 766 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 FAM71BQ8TC56 605 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 RASSF4Q9H2L5 321 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 ANAPC4Q9UJX5 808 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 RPN1P04843 607 aaKnown RBP12.3□□□□□ -0.44
SNIP1-204ENST00000638725 VEGFAP15692 232 aaPredicted RBP12.3□□□□□ -0.44
SNIP1-204ENST00000638725 TMTC3Q6ZXV5 915 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 TRAPPC11Q7Z392 1133 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 IRF2BP1Q8IU81 584 aa12.3□□□□□ -0.44
SNIP1-204ENST00000638725 RBM28Q9NW13 759 aaKnown RBP12.3□□□□□ -0.44
SNIP1-204ENST00000638725 DUOX1Q9NRD9 1551 aa12.29□□□□□ -0.44
SNIP1-204ENST00000638725 PES1O00541 588 aaKnown RBP12.29□□□□□ -0.44
SNIP1-204ENST00000638725 SRGAP2O75044 1071 aa12.29□□□□□ -0.44
SNIP1-204ENST00000638725 ATP1A1P05023 1023 aaKnown RBP12.29□□□□□ -0.44
SNIP1-204ENST00000638725 PARP1P09874 1014 aaKnown RBP12.29□□□□□ -0.44
SNIP1-204ENST00000638725 DYNLL1P63167 89 aaKnown RBP12.29□□□□□ -0.44
SNIP1-204ENST00000638725 WDR93Q6P2C0 686 aa12.29□□□□□ -0.44
SNIP1-204ENST00000638725 CCDC148Q8NFR7 591 aa12.29□□□□□ -0.44
SNIP1-204ENST00000638725 MYH13Q9UKX3 1938 aa12.29□□□□□ -0.44
SNIP1-204ENST00000638725 BAZ2BQ9UIF8 2168 aaKnown RBP12.29□□□□□ -0.44
SNIP1-204ENST00000638725 HERVK_113P62684 666 aa12.29□□□□□ -0.44
SNIP1-204ENST00000638725 EVX2Q03828 476 aa12.29□□□□□ -0.44
SNIP1-204ENST00000638725 SRBD1Q8N5C6 995 aaKnown RBP12.29□□□□□ -0.44
SNIP1-204ENST00000638725 MMS19Q96T76 1030 aa12.29□□□□□ -0.44
SNIP1-204ENST00000638725 NHSL1Q5SYE7 1610 aa12.29□□□□□ -0.44
SNIP1-204ENST00000638725 ERVV-1B6SEH8 477 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 IVLP07476 585 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 PMS1P54277 932 aaKnown RBP12.28□□□□□ -0.44
SNIP1-204ENST00000638725 USP14P54578 494 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 NLRP5P59047 1200 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 IQCA1Q86XH1 822 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 MB21D1Q8N884 522 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 OR8K1Q8NGG5 319 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 RIOK1Q9BRS2 568 aaKnown RBP12.28□□□□□ -0.44
SNIP1-204ENST00000638725 FAM204AQ9H8W3 233 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 DISP2A7MBM2 1401 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 BAZ2AQ9UIF9 1905 aaKnown RBP12.28□□□□□ -0.44
SNIP1-204ENST00000638725 KAT6BQ8WYB5 2073 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 PSMD14O00487 310 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 NMT2O60551 498 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 TUBBP07437 444 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 TNNT3P45378 269 aaPredicted RBP12.28□□□□□ -0.44
SNIP1-204ENST00000638725 CHRNDQ07001 517 aa12.28□□□□□ -0.44
SNIP1-204ENST00000638725 CAPZA3Q96KX2 299 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms