RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 RAB3IPQ96QF0 476 aaPredicted RBP20.4■□□□□ 0.86
SCARB2-213ENST00000638680 MROH5Q6ZUA9 1318 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 SPATA1Q5VX52 437 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 CCDC170Q8IYT3 715 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 RDH13Q8NBN7 331 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 MICAL1Q8TDZ2 1067 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 VTI1AQ96AJ9 217 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 EAF2Q96CJ1 260 aaPredicted RBP20.4■□□□□ 0.86
SCARB2-213ENST00000638680 RILPQ96NA2 401 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 FAM135BQ49AJ0 1406 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 CD2BP2O95400 341 aaKnown RBP20.4■□□□□ 0.86
SCARB2-213ENST00000638680 SCRN1Q12765 414 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 TRIM68Q6AZZ1 485 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 CCDC89Q8N998 374 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 NUF2Q9BZD4 464 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 PFDN4Q9NQP4 134 aa20.4■□□□□ 0.86
SCARB2-213ENST00000638680 SMCO2A6NFE2 343 aa20.39■□□□□ 0.86
SCARB2-213ENST00000638680 HSPD1P10809 573 aaKnown RBP20.39■□□□□ 0.86
SCARB2-213ENST00000638680 LSG1Q9H089 658 aaKnown RBP20.39■□□□□ 0.86
SCARB2-213ENST00000638680 DNMT1P26358 1616 aaKnown RBP20.39■□□□□ 0.86
SCARB2-213ENST00000638680 MYCLP12524 364 aaPredicted RBP20.39■□□□□ 0.85
SCARB2-213ENST00000638680 MYOCDQ8IZQ8 938 aa20.39■□□□□ 0.85
SCARB2-213ENST00000638680 RABGGTAQ92696 567 aa20.39■□□□□ 0.85
SCARB2-213ENST00000638680 RNF34Q969K3 372 aa20.39■□□□□ 0.85
SCARB2-213ENST00000638680 KIF3CO14782 793 aa20.39■□□□□ 0.85
SCARB2-213ENST00000638680 SLC1A4P43007 532 aa20.39■□□□□ 0.85
SCARB2-213ENST00000638680 CCDC13Q8IYE1 715 aa20.39■□□□□ 0.85
SCARB2-213ENST00000638680 ARHGEF10LQ9HCE6 1279 aa20.39■□□□□ 0.85
SCARB2-213ENST00000638680 TROVE2P10155 538 aaKnown RBP eCLIP20.38■□□□□ 0.85
SCARB2-213ENST00000638680 TCP1P17987 556 aaKnown RBP20.38■□□□□ 0.85
SCARB2-213ENST00000638680 STAT1P42224 750 aa20.38■□□□□ 0.85
SCARB2-213ENST00000638680 CASC4Q6P4E1 433 aa20.38■□□□□ 0.85
SCARB2-213ENST00000638680 MAPKAPK5Q8IW41 473 aa20.38■□□□□ 0.85
SCARB2-213ENST00000638680 PROCA1Q8NCQ7 364 aaPredicted RBP20.38■□□□□ 0.85
SCARB2-213ENST00000638680 H7C1D1 291 aa20.38■□□□□ 0.85
SCARB2-213ENST00000638680 XRCC5P13010 732 aaKnown RBP20.38■□□□□ 0.85
SCARB2-213ENST00000638680 TECP42680 631 aa20.38■□□□□ 0.85
SCARB2-213ENST00000638680 CCT5P48643 541 aa20.38■□□□□ 0.85
SCARB2-213ENST00000638680 NT5C3AQ9H0P0 336 aa20.38■□□□□ 0.85
SCARB2-213ENST00000638680 SRGAP1Q7Z6B7 1085 aa20.38■□□□□ 0.85
SCARB2-213ENST00000638680 HOMER3Q9NSC5 361 aa20.38■□□□□ 0.85
SCARB2-213ENST00000638680 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.38■□□□□ 0.85
SCARB2-213ENST00000638680 EPN1Q9Y6I3 576 aaPredicted RBP20.38■□□□□ 0.85
SCARB2-213ENST00000638680 MAST1Q9Y2H9 1570 aa20.38■□□□□ 0.85
SCARB2-213ENST00000638680 SLC8A3P57103 927 aa20.38■□□□□ 0.85
SCARB2-213ENST00000638680 ZSCAN10Q96SZ4 725 aaPredicted RBP20.38■□□□□ 0.85
SCARB2-213ENST00000638680 ZNF853P0CG23 659 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 ZYXQ15942 572 aaKnown RBP20.37■□□□□ 0.85
SCARB2-213ENST00000638680 GPBP1Q86WP2 473 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 BLIDQ8IZY5 108 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 TGFBRAP1Q8WUH2 860 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 ASXL2Q76L83 1435 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 GNPATO15228 680 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 RPN1P04843 607 aaKnown RBP20.37■□□□□ 0.85
SCARB2-213ENST00000638680 ADCK5Q3MIX3 580 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 AFAP1L2Q8N4X5 818 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 P3H4Q92791 437 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 PTPRTO14522 1441 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 SH3BP5O60239 455 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 CASP14P31944 242 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 CDC23Q9UJX2 597 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 ARHGEF10O15013 1369 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 GTPBP6O43824 516 aaPredicted RBP20.37■□□□□ 0.85
SCARB2-213ENST00000638680 PDIA3P30101 505 aaKnown RBP20.37■□□□□ 0.85
SCARB2-213ENST00000638680 C11orf57Q6ZUT1 292 aaPredicted RBP20.37■□□□□ 0.85
SCARB2-213ENST00000638680 ADAT2Q7Z6V5 191 aaKnown RBP20.37■□□□□ 0.85
SCARB2-213ENST00000638680 SLC35F6Q8N357 371 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 UHMK1Q8TAS1 419 aaKnown RBP20.37■□□□□ 0.85
SCARB2-213ENST00000638680 GBP5Q96PP8 586 aa20.37■□□□□ 0.85
SCARB2-213ENST00000638680 BTBD18B2RXH4 712 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 COBLO75128 1261 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 POLR2FP61218 127 aaKnown RBP20.36■□□□□ 0.85
SCARB2-213ENST00000638680 KCTD16Q68DU8 428 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 TACC3Q9Y6A5 838 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 WDR62O43379 1518 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 GCKP35557 465 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 SYMPKQ92797 1274 aaKnown RBP20.36■□□□□ 0.85
SCARB2-213ENST00000638680 PARP3Q9Y6F1 533 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 KDRP35968 1356 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 IFNL3Q8IZI9 196 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 FANCBQ8NB91 859 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 KDM3AQ9Y4C1 1321 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 ENC1O14682 589 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 ADCY8P40145 1251 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 CYP2J2P51589 502 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 TPH2Q8IWU9 490 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 CNBD1Q8NA66 436 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 ZNF526Q8TF50 670 aaPredicted RBP20.36■□□□□ 0.85
SCARB2-213ENST00000638680 TBC1D31Q96DN5 1066 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 HAUS7Q99871 368 aa20.36■□□□□ 0.85
SCARB2-213ENST00000638680 HIP1RO75146 1068 aa20.35■□□□□ 0.85
SCARB2-213ENST00000638680 COPB1P53618 953 aaKnown RBP20.35■□□□□ 0.85
SCARB2-213ENST00000638680 PTPN21Q16825 1174 aa20.35■□□□□ 0.85
SCARB2-213ENST00000638680 RASEFQ8IZ41 740 aa20.35■□□□□ 0.85
SCARB2-213ENST00000638680 GUCY2DQ02846 1103 aa20.35■□□□□ 0.85
SCARB2-213ENST00000638680 CD19P15391 556 aa20.35■□□□□ 0.85
SCARB2-213ENST00000638680 RTEL1Q9NZ71 1219 aa20.35■□□□□ 0.85
SCARB2-213ENST00000638680 GGA1Q9UJY5 639 aa20.35■□□□□ 0.85
SCARB2-213ENST00000638680 PALM2Q8IXS6 379 aa20.35■□□□□ 0.85
SCARB2-213ENST00000638680 KRT12Q99456 494 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms