RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 IQCKQ8N0W5 287 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 LINS1Q8NG48 757 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 JAKMIP2Q96AA8 810 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 LRRC2Q9BYS8 371 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 KDM4CQ9H3R0 1056 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 NCOA5Q9HCD5 579 aaKnown RBP13.42□□□□□ -0.26
CAPN3-221ENST00000638141 HAUS2Q9NVX0 235 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 CHPF2Q9P2E5 772 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 KCNH3Q9ULD8 1083 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 PHF8Q9UPP1 1060 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 FRMD3A2A2Y4 597 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 RTN3O95197 1032 aaPredicted RBP13.42□□□□□ -0.26
CAPN3-221ENST00000638141 SCTRP47872 440 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 FXR1P51114 621 aaKnown RBP eCLIP13.42□□□□□ -0.26
CAPN3-221ENST00000638141 BCL9LQ86UU0 1499 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 SPDYE1Q8NFV5 336 aaPredicted RBP13.42□□□□□ -0.26
CAPN3-221ENST00000638141 FBXO41Q8TF61 875 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 MOV10L1Q9BXT6 1211 aaKnown RBP13.42□□□□□ -0.26
CAPN3-221ENST00000638141 NOD2Q9HC29 1040 aa13.42□□□□□ -0.26
CAPN3-221ENST00000638141 PARP4Q9UKK3 1724 aaKnown RBP13.41□□□□□ -0.26
CAPN3-221ENST00000638141 GRM8O00222 908 aa13.41□□□□□ -0.26
CAPN3-221ENST00000638141 DNM1LO00429 736 aa13.41□□□□□ -0.26
CAPN3-221ENST00000638141 KBTBD3Q8NAB2 608 aa13.41□□□□□ -0.26
CAPN3-221ENST00000638141 KLHL23Q8NBE8 558 aa13.41□□□□□ -0.26
CAPN3-221ENST00000638141 NSMCE1Q8WV22 266 aa13.41□□□□□ -0.26
CAPN3-221ENST00000638141 ANKRD27Q96NW4 1050 aa13.41□□□□□ -0.26
CAPN3-221ENST00000638141 IRAK4Q9NWZ3 460 aa13.41□□□□□ -0.26
CAPN3-221ENST00000638141 EPN1Q9Y6I3 576 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-221ENST00000638141 KIF28PB7ZC32 967 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 NDUFA10O95299 355 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 PRLRP16471 622 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 PDIA5Q14554 519 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 TBC1D25Q3MII6 688 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 SLC9C2Q5TAH2 1124 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 TSEN2Q8NCE0 465 aaKnown RBP13.4□□□□□ -0.26
CAPN3-221ENST00000638141 ZBTB10Q96DT7 871 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 RRP36Q96EU6 259 aaKnown RBP13.4□□□□□ -0.26
CAPN3-221ENST00000638141 ZIM3Q96PE6 472 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 MAP3K14Q99558 947 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 SENP2Q9HC62 589 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 REXO2Q9Y3B8 237 aaKnown RBP13.4□□□□□ -0.26
CAPN3-221ENST00000638141 RPS6KL1Q9Y6S9 549 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 ECM29Q5VYK3 1845 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 PPP1R12BO60237 982 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-221ENST00000638141 SKAP2O75563 359 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-221ENST00000638141 ZMYND10O75800 440 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 GSTA1P08263 222 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 ELF3P78545 371 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-221ENST00000638141 WASHC4Q2M389 1173 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 ZFAND2BQ8WV99 257 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 CNKSR1Q969H4 720 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 CCDC9Q9Y3X0 531 aaKnown RBP13.4□□□□□ -0.26
CAPN3-221ENST00000638141 LMO7Q8WWI1 1683 aa13.4□□□□□ -0.26
CAPN3-221ENST00000638141 ACEP12821 1306 aa13.4□□□□□ -0.27
CAPN3-221ENST00000638141 BUB1BO60566 1050 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-221ENST00000638141 CAND2O75155 1236 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 CDKL5O76039 1030 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 RPSAP08865 295 aaKnown RBP13.39□□□□□ -0.27
CAPN3-221ENST00000638141 FERP16591 822 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 MARCKSP29966 332 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-221ENST00000638141 GUCY1A3Q02108 690 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 TTC39AQ5SRH9 613 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 CWF19L1Q69YN2 538 aaKnown RBP13.39□□□□□ -0.27
CAPN3-221ENST00000638141 CCDC170Q8IYT3 715 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 NGDNQ8NEJ9 315 aaKnown RBP13.39□□□□□ -0.27
CAPN3-221ENST00000638141 SUCLG2Q96I99 432 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 ATP6V1G3Q96LB4 118 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 COPRSQ9NQ92 184 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 HDAC6Q9UBN7 1215 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 RIPOR2Q9Y4F9 1068 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 A6NHS1 94 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 LRRC10BA6NIK2 292 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 PDE2AO00408 941 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-221ENST00000638141 PAEPP09466 180 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 ATP1A2P50993 1020 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 BLMHQ13867 455 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 ACCSLQ4AC99 568 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 CCDC38Q502W7 563 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 HSP90AA4PQ58FG1 418 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 SLC30A9Q6PML9 568 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 TRMT44Q8IYL2 757 aaKnown RBP13.39□□□□□ -0.27
CAPN3-221ENST00000638141 KRI1Q8N9T8 703 aaKnown RBP13.39□□□□□ -0.27
CAPN3-221ENST00000638141 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
CAPN3-221ENST00000638141 CAGE1Q8TC20 777 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 THOC1Q96FV9 657 aaKnown RBP13.39□□□□□ -0.27
CAPN3-221ENST00000638141 PURBQ96QR8 312 aaKnown RBP13.39□□□□□ -0.27
CAPN3-221ENST00000638141 SLF1Q9BQI6 1058 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 GUCA1BQ9UMX6 200 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 MAP3K2Q9Y2U5 619 aa13.39□□□□□ -0.27
CAPN3-221ENST00000638141 GMNCA6NCL1 334 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 LUC7L3O95232 432 aaKnown RBP13.38□□□□□ -0.27
CAPN3-221ENST00000638141 GCLCP48506 637 aaPredicted RBP13.38□□□□□ -0.27
CAPN3-221ENST00000638141 ROR2Q01974 943 aaKnown RBP13.38□□□□□ -0.27
CAPN3-221ENST00000638141 ITGB3BPQ13352 177 aaPredicted RBP13.38□□□□□ -0.27
CAPN3-221ENST00000638141 ZMYM1Q5SVZ6 1142 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 CPLX3Q8WVH0 158 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 NUP58Q9BVL2 599 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 STIM2Q9P246 746 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 ABLIM1O14639 778 aa13.38□□□□□ -0.27
CAPN3-221ENST00000638141 CPLX1O14810 134 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms