RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 NUP88Q99567 741 aaPredicted RBP11.37□□□□□ -0.59
SMARCA2-265ENST00000638139 RHOXF2Q9BQY4 288 aa11.37□□□□□ -0.59
SMARCA2-265ENST00000638139 TMEM51Q9NW97 253 aa11.37□□□□□ -0.59
SMARCA2-265ENST00000638139 PSD3Q9NYI0 1048 aa11.37□□□□□ -0.59
SMARCA2-265ENST00000638139 DISP2A7MBM2 1401 aa11.37□□□□□ -0.59
SMARCA2-265ENST00000638139 KCNJ18B7U540 433 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 ADAMTS3O15072 1205 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 CALM1P0DP23 149 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 CALM2P0DP24 149 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 CALM3P0DP25 149 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 CAPN2P17655 700 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 EIF5P55010 431 aaKnown RBP11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 TUBB4BP68371 445 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 SPAG1Q07617 926 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 KCNJ12Q14500 433 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 WHAMMP3Q1A5X7 153 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 SRBD1Q8N5C6 995 aaKnown RBP11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 NELFBQ8WX92 580 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 SLF1Q9BQI6 1058 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 SUGCTQ9HAC7 445 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 L1RE1Q9UN81 338 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 COL1A1P02452 1464 aaPredicted RBP11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 ERLIN1O75477 346 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 DDAH1O94760 285 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 GYG1P46976 350 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 VSNL1P62760 191 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 ZNF658Q5TYW1 1059 aaPredicted RBP11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 PIK3AP1Q6ZUJ8 805 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 IQCA1Q86XH1 822 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 SLAIN2Q9P270 581 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 MYO1AQ9UBC5 1043 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 A0A1B0GUL6 1792 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 ZNF804BA4D1E1 1349 aa11.36□□□□□ -0.59
SMARCA2-265ENST00000638139 CTAGE15A4D2H0 777 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 WTIPA6NIX2 430 aaPredicted RBP11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 FGRP09769 529 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 CTAGE8P0CG41 777 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 KRT9P35527 623 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 AMPD2Q01433 879 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 TRIM14Q14142 442 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 ZSCAN26Q16670 478 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 CTAGE6Q86UF2 777 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 CTAGE4Q8IX94 777 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 ZBTB9Q96C00 473 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 CHP1Q99653 195 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 BRIP1Q9BX63 1249 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 LAMB2P55268 1798 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 RPN1P04843 607 aaKnown RBP11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 VEGFAP15692 232 aaPredicted RBP11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 MCM7P33993 719 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 LMAN1P49257 510 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 PIP4K2BP78356 416 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 EVX2Q03828 476 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 RAD51AP2Q09MP3 1159 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 WWC2Q6AWC2 1192 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 CTR9Q6PD62 1173 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 MSL3Q8N5Y2 521 aaKnown RBP11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 NOA1Q8NC60 698 aaKnown RBP11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 ANKRD20A12PQ8NF67 263 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 BTG4Q9NY30 223 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 VPS18Q9P253 973 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 MYO6Q9UM54 1294 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 MAPK8IP1Q9UQF2 711 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 GDAQ9Y2T3 454 aa11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 REXO2Q9Y3B8 237 aaKnown RBP11.35□□□□□ -0.59
SMARCA2-265ENST00000638139 A0A0U1RQG5 324 aaPredicted RBP11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 NMT2O60551 498 aa11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 N4BP1O75113 896 aaKnown RBP11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 PRCPP42785 496 aa11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 TRAPPC10P48553 1259 aa11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 NLRP5P59047 1200 aa11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 INTS5Q6P9B9 1019 aaKnown RBP11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 ZNF384Q8TF68 577 aa11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 PYM1Q9BRP8 204 aaKnown RBP11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 EPN1Q9Y6I3 576 aaPredicted RBP11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 TAF1P21675 1872 aa11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 NTSR2O95665 410 aa11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 SCG2P13521 617 aa11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 UBXN1Q04323 297 aa11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 NCAPH2Q6IBW4 605 aa11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 IRF2BP1Q8IU81 584 aa11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 RMND1Q9NWS8 449 aa11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 TRIM10Q9UDY6 481 aa11.34□□□□□ -0.59
SMARCA2-265ENST00000638139 USP17L12C9JPN9 530 aa11.33□□□□□ -0.59
SMARCA2-265ENST00000638139 USP17L21D6R901 530 aa11.33□□□□□ -0.59
SMARCA2-265ENST00000638139 EIF3JO75822 258 aaKnown RBP11.33□□□□□ -0.59
SMARCA2-265ENST00000638139 CAMTA2O94983 1202 aa11.33□□□□□ -0.59
SMARCA2-265ENST00000638139 NDUFA10O95299 355 aa11.33□□□□□ -0.59
SMARCA2-265ENST00000638139 PARP10Q53GL7 1025 aa11.33□□□□□ -0.59
SMARCA2-265ENST00000638139 C4orf32Q8N8J7 132 aa11.33□□□□□ -0.59
SMARCA2-265ENST00000638139 CTCFLQ8NI51 663 aaPredicted RBP11.33□□□□□ -0.59
SMARCA2-265ENST00000638139 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.33□□□□□ -0.59
SMARCA2-265ENST00000638139 TTC26A0AVF1 554 aa11.33□□□□□ -0.6
SMARCA2-265ENST00000638139 TRIM49BA6NDI0 452 aa11.33□□□□□ -0.6
SMARCA2-265ENST00000638139 PARP1P09874 1014 aaKnown RBP11.33□□□□□ -0.6
SMARCA2-265ENST00000638139 PCP11498 1178 aaKnown RBP11.33□□□□□ -0.6
SMARCA2-265ENST00000638139 CASP8Q14790 479 aa11.33□□□□□ -0.6
SMARCA2-265ENST00000638139 PFKFB3Q16875 520 aaPredicted RBP11.33□□□□□ -0.6
SMARCA2-265ENST00000638139 GOLGA5Q8TBA6 731 aa11.33□□□□□ -0.6
SMARCA2-265ENST00000638139 GBP3Q9H0R5 595 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms