RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
CTSD-207ENST00000636571 TTBK2Q6IQ55 1244 aa18.15■□□□□ 0.5
CTSD-207ENST00000636571 CCDC144CPQ8IYA2 1237 aa18.15■□□□□ 0.5
CTSD-207ENST00000636571 ZNF654Q8IZM8 581 aa18.15■□□□□ 0.5
CTSD-207ENST00000636571 TANGO6Q9C0B7 1094 aa18.15■□□□□ 0.5
CTSD-207ENST00000636571 CPVLQ9H3G5 476 aa18.15■□□□□ 0.5
CTSD-207ENST00000636571 ST18O60284 1047 aa18.14■□□□□ 0.5
CTSD-207ENST00000636571 SLC1A4P43007 532 aa18.14■□□□□ 0.5
CTSD-207ENST00000636571 AK2P54819 239 aa18.14■□□□□ 0.5
CTSD-207ENST00000636571 ANKRD23Q86SG2 305 aa18.14■□□□□ 0.5
CTSD-207ENST00000636571 NUP133Q8WUM0 1156 aa18.14■□□□□ 0.5
CTSD-207ENST00000636571 LPAR1Q92633 364 aa18.14■□□□□ 0.5
CTSD-207ENST00000636571 MTA3Q9BTC8 594 aa18.14■□□□□ 0.5
CTSD-207ENST00000636571 AGXT2Q9BYV1 514 aa18.14■□□□□ 0.5
CTSD-207ENST00000636571 GPCPD1Q9NPB8 672 aa18.14■□□□□ 0.5
CTSD-207ENST00000636571 KLF18A0A0U1RQI7 1052 aa18.14■□□□□ 0.49
CTSD-207ENST00000636571 CCDC69A6NI79 296 aa18.14■□□□□ 0.49
CTSD-207ENST00000636571 WDR46O15213 610 aaKnown RBP18.14■□□□□ 0.49
CTSD-207ENST00000636571 SNHG28P0DPA3 235 aa18.14■□□□□ 0.49
CTSD-207ENST00000636571 TROAPQ12815 778 aa18.14■□□□□ 0.49
CTSD-207ENST00000636571 CCDC96Q2M329 555 aa18.14■□□□□ 0.49
CTSD-207ENST00000636571 POTEEQ6S8J3 1075 aa18.14■□□□□ 0.49
CTSD-207ENST00000636571 SGMS1Q86VZ5 419 aa18.14■□□□□ 0.49
CTSD-207ENST00000636571 STAG2Q8N3U4 1231 aa18.14■□□□□ 0.49
CTSD-207ENST00000636571 GMCL1Q96IK5 515 aa18.14■□□□□ 0.49
CTSD-207ENST00000636571 R3HDMLQ9H3Y0 253 aa18.14■□□□□ 0.49
CTSD-207ENST00000636571 NAP1L2Q9ULW6 460 aaPredicted RBP18.14■□□□□ 0.49
CTSD-207ENST00000636571 SYNPO2Q9UMS6 1093 aa18.14■□□□□ 0.49
CTSD-207ENST00000636571 BAZ2BQ9UIF8 2168 aaKnown RBP18.14■□□□□ 0.49
CTSD-207ENST00000636571 BMP3P12645 472 aa18.13■□□□□ 0.49
CTSD-207ENST00000636571 SLC16A2P36021 539 aa18.13■□□□□ 0.49
CTSD-207ENST00000636571 APOA5Q6Q788 366 aa18.13■□□□□ 0.49
CTSD-207ENST00000636571 CATSPERGQ6ZRH7 1159 aa18.13■□□□□ 0.49
CTSD-207ENST00000636571 MICU3Q86XE3 530 aa18.13■□□□□ 0.49
CTSD-207ENST00000636571 ASCC2Q9H1I8 757 aaPredicted RBP18.13■□□□□ 0.49
CTSD-207ENST00000636571 TMEM232C9JQI7 657 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 HOXA7P31268 230 aaPredicted RBP18.12■□□□□ 0.49
CTSD-207ENST00000636571 INHBEP58166 350 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 CATIPQ7Z7H3 387 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 P2RX7Q99572 595 aaKnown RBP18.12■□□□□ 0.49
CTSD-207ENST00000636571 SLC12A7Q9Y666 1083 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 COL11A1P12107 1806 aaPredicted RBP18.12■□□□□ 0.49
CTSD-207ENST00000636571 USP17L15C9J2P7 530 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 USP17L13C9JLJ4 530 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 USP17L11C9JVI0 530 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 USP17L18D6R9N7 530 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 USP17L22D6RA61 530 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 USP17L17D6RBQ6 530 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 USP17L19D6RCP7 530 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 USP17L20D6RJB6 530 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 FLOT1O75955 427 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 ZNF543Q08ER8 600 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 USP17L24Q0WX57 530 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 HSCBQ8IWL3 235 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 DCAF4Q8WV16 495 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 UBA5Q9GZZ9 404 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 RNF186Q9NXI6 227 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 MAD2L2Q9UI95 211 aa18.12■□□□□ 0.49
CTSD-207ENST00000636571 DTNBO60941 627 aa18.11■□□□□ 0.49
CTSD-207ENST00000636571 TRPA1O75762 1119 aa18.11■□□□□ 0.49
CTSD-207ENST00000636571 SNAP25P60880 206 aa18.11■□□□□ 0.49
CTSD-207ENST00000636571 CRHR2Q13324 411 aa18.11■□□□□ 0.49
CTSD-207ENST00000636571 TAF1CQ15572 869 aaPredicted RBP18.11■□□□□ 0.49
CTSD-207ENST00000636571 SLC35G1Q2M3R5 365 aa18.11■□□□□ 0.49
CTSD-207ENST00000636571 CMTR1Q8N1G2 835 aaKnown RBP18.11■□□□□ 0.49
CTSD-207ENST00000636571 TMTC2Q8N394 836 aa18.11■□□□□ 0.49
CTSD-207ENST00000636571 FBXL16Q8N461 479 aa18.11■□□□□ 0.49
CTSD-207ENST00000636571 TSKSQ9UJT2 592 aa18.11■□□□□ 0.49
CTSD-207ENST00000636571 TPCN1Q9ULQ1 816 aa18.11■□□□□ 0.49
CTSD-207ENST00000636571 HPS5Q9UPZ3 1129 aa18.11■□□□□ 0.49
CTSD-207ENST00000636571 SPDYE16A6NNV3 312 aaPredicted RBP18.1■□□□□ 0.49
CTSD-207ENST00000636571 GOLGA8BA8MQT2 603 aa18.1■□□□□ 0.49
CTSD-207ENST00000636571 LARGE1O95461 756 aa18.1■□□□□ 0.49
CTSD-207ENST00000636571 TBC1D8O95759 1140 aa18.1■□□□□ 0.49
CTSD-207ENST00000636571 IRX3P78415 501 aaPredicted RBP18.1■□□□□ 0.49
CTSD-207ENST00000636571 GRM4Q14833 912 aa18.1■□□□□ 0.49
CTSD-207ENST00000636571 NBPF11Q86T75 865 aa18.1■□□□□ 0.49
CTSD-207ENST00000636571 SPRYD3Q8NCJ5 442 aa18.1■□□□□ 0.49
CTSD-207ENST00000636571 SNX21Q969T3 373 aa18.1■□□□□ 0.49
CTSD-207ENST00000636571 KIFC2Q96AC6 838 aa18.1■□□□□ 0.49
CTSD-207ENST00000636571 ATG4CQ96DT6 458 aa18.1■□□□□ 0.49
CTSD-207ENST00000636571 SMCHD1A6NHR9 2005 aa18.1■□□□□ 0.49
CTSD-207ENST00000636571 DDAH1O94760 285 aa18.09■□□□□ 0.49
CTSD-207ENST00000636571 PARP1P09874 1014 aaKnown RBP18.09■□□□□ 0.49
CTSD-207ENST00000636571 IKQ13123 557 aaPredicted RBP18.09■□□□□ 0.49
CTSD-207ENST00000636571 STK3Q13188 491 aa18.09■□□□□ 0.49
CTSD-207ENST00000636571 IPO9Q96P70 1041 aaKnown RBP18.09■□□□□ 0.49
CTSD-207ENST00000636571 ZBTB43O43298 467 aa18.09■□□□□ 0.49
CTSD-207ENST00000636571 PLEKHA8P1O95397 391 aa18.09■□□□□ 0.49
CTSD-207ENST00000636571 OSBPP22059 807 aa18.09■□□□□ 0.49
CTSD-207ENST00000636571 PDIA3P30101 505 aaKnown RBP18.09■□□□□ 0.49
CTSD-207ENST00000636571 CDC27P30260 824 aa18.09■□□□□ 0.49
CTSD-207ENST00000636571 HERVK_113P62684 666 aa18.09■□□□□ 0.49
CTSD-207ENST00000636571 CCT2P78371 535 aaKnown RBP18.09■□□□□ 0.49
CTSD-207ENST00000636571 BECN1Q14457 450 aa18.09■□□□□ 0.49
CTSD-207ENST00000636571 ALDH8A1Q9H2A2 487 aaPredicted RBP18.09■□□□□ 0.49
CTSD-207ENST00000636571 NCOA5Q9HCD5 579 aaKnown RBP18.09■□□□□ 0.49
CTSD-207ENST00000636571 TXNRD2Q9NNW7 524 aa18.09■□□□□ 0.49
CTSD-207ENST00000636571 FAM217BQ9NTX9 383 aaPredicted RBP18.09■□□□□ 0.49
CTSD-207ENST00000636571 SLC45A1Q9Y2W3 748 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms