RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 SLC26A6Q9BXS9 759 aa11.13□□□□□ -0.63
CACNA1A-223ENST00000636058 KIAA1683Q9H0B3 1180 aa11.13□□□□□ -0.63
CACNA1A-223ENST00000636058 VCPKMTQ9H867 229 aa11.13□□□□□ -0.63
CACNA1A-223ENST00000636058 AS3MTQ9HBK9 375 aa11.13□□□□□ -0.63
CACNA1A-223ENST00000636058 GOPCQ9HD26 462 aa11.13□□□□□ -0.63
CACNA1A-223ENST00000636058 KIF3AQ9Y496 699 aa11.13□□□□□ -0.63
CACNA1A-223ENST00000636058 MYH6P13533 1939 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 UNCXA6NJT0 531 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 UBE2Q2LH0YL09 131 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 STX6O43752 255 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 DEXIO95424 95 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 ITGBL1O95965 494 aaPredicted RBP11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 NUCB2P80303 420 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 FMR1Q06787 632 aaKnown RBP eCLIP11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 CCDC96Q2M329 555 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 LDLRAD1Q5T700 205 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 LARP1BQ659C4 914 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 MOB2Q70IA6 237 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 ARMC9Q7Z3E5 817 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 ZNF280CQ8ND82 737 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 RGS22Q8NE09 1264 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 WASF1Q92558 559 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 FEZ1Q99689 392 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 RBM27Q9P2N5 1060 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 ZDHHC9Q9Y397 364 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 CSADQ9Y600 493 aa11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 V9GY48 417 aaPredicted RBP11.12□□□□□ -0.63
CACNA1A-223ENST00000636058 USP17L10C9JJH3 530 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 RAD21O60216 631 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 BRD1O95696 1058 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 BMP3P12645 472 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 BACE1P56817 501 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 FKBP1BP68106 108 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 SPP2Q13103 211 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 MTMR2Q13614 643 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 ZYXQ15942 572 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 PKN1Q16512 942 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 TTBK2Q6IQ55 1244 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 KCTD1Q719H9 257 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 SPICE1Q8N0Z3 855 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 LPAR1Q92633 364 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 NUP88Q99567 741 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 ALG1Q9BT22 464 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 UBA5Q9GZZ9 404 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 CPVLQ9H3G5 476 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 RIOX1Q9H6W3 641 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 GPCPD1Q9NPB8 672 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 MTMR6Q9Y217 621 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 AFG3L2Q9Y4W6 797 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 ZHX2Q9Y6X8 837 aa11.11□□□□□ -0.63
CACNA1A-223ENST00000636058 WDR33Q9C0J8 1336 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 TRPM7Q96QT4 1865 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 PTPRFP10586 1907 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 SPDYE5A6NIY4 337 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 TRIM75PA6NK02 468 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 C19orf81C9J6K1 198 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 KIF3CO14782 793 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 USP14P54578 494 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 AKAP17AQ02040 695 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 PPATQ06203 517 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 PFKFB3Q16875 520 aaPredicted RBP11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 BTNL9Q6UXG8 535 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 ERO1BQ86YB8 467 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 CLMNQ96JQ2 1002 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 C8orf76Q96K31 380 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 C12orf42Q96LP6 360 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 AIFM3Q96NN9 605 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 ZNF408Q9H9D4 720 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 EMILIN3Q9NT22 766 aa11.1□□□□□ -0.63
CACNA1A-223ENST00000636058 LOC285556D6RIA3 1793 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 hCG_1642624A0A1W2PR95 340 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 WDR46O15213 610 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 PLA2G6O60733 806 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 CELF2O95319 508 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 ZSCAN22P10073 491 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 SCG2P13521 617 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 SLC16A2P36021 539 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 SH3D19Q5HYK7 790 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 FAM83BQ5T0W9 1011 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 ADGRF4Q8IZF3 695 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 FBXO18Q8NFZ0 1043 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 CNKSR2Q8WXI2 1034 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 MTMR8Q96EF0 704 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 RRP36Q96EU6 259 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 ELP3Q9H9T3 547 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 JMJD4Q9H9V9 463 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 GBA2Q9HCG7 927 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 GJB4Q9NTQ9 266 aa11.09□□□□□ -0.63
CACNA1A-223ENST00000636058 PARP14Q460N5 1801 aa11.08□□□□□ -0.64
CACNA1A-223ENST00000636058 VPS37CA5D8V6 355 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-223ENST00000636058 TMEM232C9JQI7 657 aa11.08□□□□□ -0.64
CACNA1A-223ENST00000636058 H3BQV1 296 aa11.08□□□□□ -0.64
CACNA1A-223ENST00000636058 VCAM1P19320 739 aa11.08□□□□□ -0.64
CACNA1A-223ENST00000636058 STAT2P52630 851 aa11.08□□□□□ -0.64
CACNA1A-223ENST00000636058 DGKZQ13574 1117 aa11.08□□□□□ -0.64
CACNA1A-223ENST00000636058 IFFO2Q5TF58 517 aa11.08□□□□□ -0.64
CACNA1A-223ENST00000636058 CST9Q5W186 159 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms