RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 MINDY4BA8MYZ0 360 aa6.02□□□□□ -1.45
SCN1A-211ENST00000635893 RPL10P27635 214 aaKnown RBP6.02□□□□□ -1.45
SCN1A-211ENST00000635893 ITGAEP38570 1179 aa6.02□□□□□ -1.45
SCN1A-211ENST00000635893 ZNF385BQ569K4 471 aa6.02□□□□□ -1.45
SCN1A-211ENST00000635893 FBXO33Q7Z6M2 555 aa6.02□□□□□ -1.45
SCN1A-211ENST00000635893 NLRX1Q86UT6 975 aa6.02□□□□□ -1.45
SCN1A-211ENST00000635893 SGPP1Q9BX95 441 aa6.02□□□□□ -1.45
SCN1A-211ENST00000635893 HDAC8Q9BY41 377 aa6.02□□□□□ -1.45
SCN1A-211ENST00000635893 MRS2Q9HD23 443 aa6.02□□□□□ -1.45
SCN1A-211ENST00000635893 PARD6AQ9NPB6 346 aa6.02□□□□□ -1.45
SCN1A-211ENST00000635893 ZMYM5Q9UJ78 669 aa6.02□□□□□ -1.45
SCN1A-211ENST00000635893 SLC22A31A6NKX4 558 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 RFXAPO00287 272 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 UBOX5O94941 541 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 GARTP22102 1010 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 KIR2DL1P43626 348 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-211ENST00000635893 KIR2DL2P43627 348 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-211ENST00000635893 GALK1P51570 392 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 TCERG1LQ5VWI1 586 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 FAM196AQ6ZSG2 479 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 WAPLQ7Z5K2 1190 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 ZNF655Q8N720 491 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-211ENST00000635893 FBXO27Q8NI29 283 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 TCTN2Q96GX1 697 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 MAP6Q96JE9 813 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.01□□□□□ -1.45
SCN1A-211ENST00000635893 CRTAC1Q9NQ79 661 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 VTI1BQ9UEU0 232 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 KCTD3Q9Y597 815 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 ROBO2Q9HCK4 1378 aa6.01□□□□□ -1.45
SCN1A-211ENST00000635893 SSU72P8A0A1W2PR75 194 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 HRKO00198 91 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 NRDCO43847 1150 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 RAG1P15918 1043 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 BMP7P18075 431 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 BUD31P41223 144 aaPredicted RBP6□□□□□ -1.45
SCN1A-211ENST00000635893 PCBP3P57721 371 aaKnown RBP6□□□□□ -1.45
SCN1A-211ENST00000635893 SLC14A2Q15849 920 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 CWF19L2Q2TBE0 894 aaKnown RBP6□□□□□ -1.45
SCN1A-211ENST00000635893 ARSHQ5FYA8 562 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 ADGRF1Q5T601 910 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 TMEM151BQ8IW70 566 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 SIRT2Q8IXJ6 389 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 LINC00116Q8NCU8 138 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 C20orf173Q96LM9 149 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 FOXP3Q9BZS1 431 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 ZCCHC4Q9H5U6 513 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 TCFL5Q9UL49 500 aa6□□□□□ -1.45
SCN1A-211ENST00000635893 TLR3O15455 904 aaKnown RBP5.99□□□□□ -1.45
SCN1A-211ENST00000635893 USP2O75604 605 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-211ENST00000635893 ATE1O95260 518 aa5.99□□□□□ -1.45
SCN1A-211ENST00000635893 EFEMP2O95967 443 aa5.99□□□□□ -1.45
SCN1A-211ENST00000635893 SRSF3P84103 164 aaKnown RBP5.99□□□□□ -1.45
SCN1A-211ENST00000635893 RAD51AP2Q09MP3 1159 aa5.99□□□□□ -1.45
SCN1A-211ENST00000635893 NBPF9Q3BBW0 867 aa5.99□□□□□ -1.45
SCN1A-211ENST00000635893 NBPF12Q5TAG4 269 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-211ENST00000635893 LRRC3Q9BY71 257 aa5.99□□□□□ -1.45
SCN1A-211ENST00000635893 KCNQ5Q9NR82 932 aa5.99□□□□□ -1.45
SCN1A-211ENST00000635893 GMIPQ9P107 970 aa5.99□□□□□ -1.45
SCN1A-211ENST00000635893 TMEM82A0PJX8 343 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 SSPNQ14714 243 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 FBXL19Q6PCT2 694 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 CEP128Q6ZU80 1094 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 ERMP1Q7Z2K6 904 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 TMC3Q7Z5M5 1100 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 AEBP1Q8IUX7 1158 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 RELTQ969Z4 430 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 SIGLEC10Q96LC7 697 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 KCNC2Q96PR1 638 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 BRMS1Q9HCU9 246 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 KBTBD4Q9NVX7 518 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 SIRT5Q9NXA8 310 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 MBD1Q9UIS9 605 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-211ENST00000635893 PCDHB14Q9Y5E9 798 aa5.98□□□□□ -1.45
SCN1A-211ENST00000635893 SYPP08247 313 aa5.97□□□□□ -1.45
SCN1A-211ENST00000635893 PNLIPP16233 465 aa5.97□□□□□ -1.45
SCN1A-211ENST00000635893 CDCP2Q5VXM1 449 aa5.97□□□□□ -1.45
SCN1A-211ENST00000635893 MARCH10Q8NA82 808 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-211ENST00000635893 HHIPL1Q96JK4 782 aa5.97□□□□□ -1.45
SCN1A-211ENST00000635893 SUPT16HQ9Y5B9 1047 aaKnown RBP5.97□□□□□ -1.45
SCN1A-211ENST00000635893 IRAK3Q9Y616 596 aa5.97□□□□□ -1.45
SCN1A-211ENST00000635893 SIGLEC6O43699 453 aa5.96□□□□□ -1.46
SCN1A-211ENST00000635893 GREM1O60565 184 aa5.96□□□□□ -1.46
SCN1A-211ENST00000635893 FKTNO75072 461 aa5.96□□□□□ -1.46
SCN1A-211ENST00000635893 PI3P19957 117 aa5.96□□□□□ -1.46
SCN1A-211ENST00000635893 EIF4A3P38919 411 aaKnown RBP5.96□□□□□ -1.46
SCN1A-211ENST00000635893 CCNFP41002 786 aa5.96□□□□□ -1.46
SCN1A-211ENST00000635893 YBX1P67809 324 aaKnown RBP5.96□□□□□ -1.46
SCN1A-211ENST00000635893 TAGLNQ01995 201 aaKnown RBP5.96□□□□□ -1.46
SCN1A-211ENST00000635893 SNW1Q13573 536 aaKnown RBP5.96□□□□□ -1.46
SCN1A-211ENST00000635893 BBS9Q3SYG4 887 aa5.96□□□□□ -1.46
SCN1A-211ENST00000635893 OLFML2BQ68BL8 750 aa5.96□□□□□ -1.46
SCN1A-211ENST00000635893 CNNM2Q9H8M5 875 aa5.96□□□□□ -1.46
SCN1A-211ENST00000635893 EHMT1Q9H9B1 1298 aa5.96□□□□□ -1.46
SCN1A-211ENST00000635893 COPRSQ9NQ92 184 aa5.96□□□□□ -1.46
SCN1A-211ENST00000635893 TNFRSF10DQ9UBN6 386 aa5.96□□□□□ -1.46
SCN1A-211ENST00000635893 A0A0G2JLL6 359 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-211ENST00000635893 ABLIM1O14639 778 aa5.95□□□□□ -1.46
SCN1A-211ENST00000635893 N4BP3O15049 544 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms