RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 C19orf73Q9NVV2 129 aa4.1□□□□□ -1.75
PSPC1-208ENST00000635562 TMEM59LQ9UK28 342 aa4.1□□□□□ -1.75
PSPC1-208ENST00000635562 ZNRF3Q9ULT6 936 aa4.1□□□□□ -1.75
PSPC1-208ENST00000635562 MEIS3P2A8K0S8 358 aa4.09□□□□□ -1.75
PSPC1-208ENST00000635562 H3BS24 57 aa4.09□□□□□ -1.75
PSPC1-208ENST00000635562 BPNT1O95861 308 aa4.09□□□□□ -1.75
PSPC1-208ENST00000635562 CST3P01034 146 aaPredicted RBP4.09□□□□□ -1.75
PSPC1-208ENST00000635562 ETV3P41162 512 aa4.09□□□□□ -1.75
PSPC1-208ENST00000635562 GIPRP48546 466 aa4.09□□□□□ -1.75
PSPC1-208ENST00000635562 ZNF165P49910 485 aa4.09□□□□□ -1.75
PSPC1-208ENST00000635562 KCNA10Q16322 511 aa4.09□□□□□ -1.75
PSPC1-208ENST00000635562 TMEM201Q5SNT2 666 aa4.09□□□□□ -1.75
PSPC1-208ENST00000635562 TTLL10Q6ZVT0 673 aa4.09□□□□□ -1.75
PSPC1-208ENST00000635562 UBE3DQ7Z6J8 389 aa4.09□□□□□ -1.75
PSPC1-208ENST00000635562 DHX38Q92620 1227 aaKnown RBP4.09□□□□□ -1.75
PSPC1-208ENST00000635562 SRRTQ9BXP5 876 aaKnown RBP4.09□□□□□ -1.75
PSPC1-208ENST00000635562 TRIT1Q9H3H1 467 aaKnown RBP4.09□□□□□ -1.75
PSPC1-208ENST00000635562 ZNF408Q9H9D4 720 aa4.09□□□□□ -1.75
PSPC1-208ENST00000635562 SLAMF8Q9P0V8 285 aa4.09□□□□□ -1.75
PSPC1-208ENST00000635562 NCANO14594 1321 aa4.09□□□□□ -1.75
PSPC1-208ENST00000635562 PRR33A8MZF0 331 aa4.08□□□□□ -1.76
PSPC1-208ENST00000635562 PRRG2O14669 202 aa4.08□□□□□ -1.76
PSPC1-208ENST00000635562 KRT1P04264 644 aa4.08□□□□□ -1.76
PSPC1-208ENST00000635562 ETFBP38117 255 aa4.08□□□□□ -1.76
PSPC1-208ENST00000635562 IRX6P78412 446 aaPredicted RBP4.08□□□□□ -1.76
PSPC1-208ENST00000635562 ANKRD13AQ8IZ07 590 aa4.08□□□□□ -1.76
PSPC1-208ENST00000635562 LILRA2Q8N149 483 aa4.08□□□□□ -1.76
PSPC1-208ENST00000635562 MYLIPQ8WY64 445 aa4.08□□□□□ -1.76
PSPC1-208ENST00000635562 UBE2FQ969M7 185 aa4.08□□□□□ -1.76
PSPC1-208ENST00000635562 SYTL4Q96C24 671 aaPredicted RBP4.08□□□□□ -1.76
PSPC1-208ENST00000635562 DIRC2Q96SL1 478 aa4.08□□□□□ -1.76
PSPC1-208ENST00000635562 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
PSPC1-208ENST00000635562 PPT2Q9UMR5 302 aa4.08□□□□□ -1.76
PSPC1-208ENST00000635562 PCDHB14Q9Y5E9 798 aa4.08□□□□□ -1.76
PSPC1-208ENST00000635562 CORINQ9Y5Q5 1042 aa4.08□□□□□ -1.76
PSPC1-208ENST00000635562 B8ZZF3 427 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 NPIPB6E9PJ23 425 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 KLF4O43474 513 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 GRIN3BO60391 1043 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 DNAJA2O60884 412 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 HTR3BO95264 441 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 CBX7O95931 251 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 HPXP02790 462 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 IMPDH2P12268 514 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 NCLP19338 710 aaKnown RBP4.07□□□□□ -1.76
PSPC1-208ENST00000635562 GTF2F1P35269 517 aaKnown RBP eCLIP4.07□□□□□ -1.76
PSPC1-208ENST00000635562 PDE4BQ07343 736 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 SERINC3Q13530 473 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 PRAMEF13Q5VWM6 474 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 CCDC81Q6ZN84 652 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 ATG14Q6ZNE5 492 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 GK5Q6ZS86 529 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 TTC6Q86TZ1 520 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 IRF2BP1Q8IU81 584 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 TEX2Q8IWB9 1127 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 MRPL41Q8IXM3 137 aaKnown RBP4.07□□□□□ -1.76
PSPC1-208ENST00000635562 TAB3Q8N5C8 712 aaPredicted RBP4.07□□□□□ -1.76
PSPC1-208ENST00000635562 FAM169BQ8N8A8 192 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 OR6P1Q8NGX9 317 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 SLC6A17Q9H1V8 727 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 FBRSQ9HAH7 460 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 ZSWIM5Q9P217 1185 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 PRKAG3Q9UGI9 489 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 ADAM30Q9UKF2 790 aa4.07□□□□□ -1.76
PSPC1-208ENST00000635562 PLEKHD1A6NEE1 506 aa4.06□□□□□ -1.76
PSPC1-208ENST00000635562 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
PSPC1-208ENST00000635562 SMARCA5O60264 1052 aaPredicted RBP4.06□□□□□ -1.76
PSPC1-208ENST00000635562 STK10O94804 968 aaKnown RBP4.06□□□□□ -1.76
PSPC1-208ENST00000635562 SSBP05455 408 aaKnown RBP eCLIP4.06□□□□□ -1.76
PSPC1-208ENST00000635562 MCM4P33991 863 aa4.06□□□□□ -1.76
PSPC1-208ENST00000635562 EIF6P56537 245 aaKnown RBP4.06□□□□□ -1.76
PSPC1-208ENST00000635562 SETQ01105 290 aaPredicted RBP4.06□□□□□ -1.76
PSPC1-208ENST00000635562 NKG7Q16617 165 aa4.06□□□□□ -1.76
PSPC1-208ENST00000635562 NBPF6Q5VWK0 638 aa4.06□□□□□ -1.76
PSPC1-208ENST00000635562 SLC6A19Q695T7 634 aa4.06□□□□□ -1.76
PSPC1-208ENST00000635562 LSRQ86X29 649 aaPredicted RBP4.06□□□□□ -1.76
PSPC1-208ENST00000635562 OXR1Q8N573 874 aa4.06□□□□□ -1.76
PSPC1-208ENST00000635562 PDZD8Q8NEN9 1154 aa4.06□□□□□ -1.76
PSPC1-208ENST00000635562 ACSF2Q96CM8 615 aaPredicted RBP4.06□□□□□ -1.76
PSPC1-208ENST00000635562 NBPF4Q96M43 638 aa4.06□□□□□ -1.76
PSPC1-208ENST00000635562 DNAJC2Q99543 621 aaKnown RBP4.06□□□□□ -1.76
PSPC1-208ENST00000635562 HIRIP3Q9BW71 556 aaPredicted RBP4.06□□□□□ -1.76
PSPC1-208ENST00000635562 LNPKQ9C0E8 428 aa4.06□□□□□ -1.76
PSPC1-208ENST00000635562 ANTXR1Q9H6X2 564 aa4.06□□□□□ -1.76
PSPC1-208ENST00000635562 REV1Q9UBZ9 1251 aa4.06□□□□□ -1.76
PSPC1-208ENST00000635562 TJP2Q9UDY2 1190 aa4.06□□□□□ -1.76
PSPC1-208ENST00000635562 LOC102724159A0A0B4J2E5 919 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 FITM1A5D6W6 292 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 SLC22A31A6NKX4 558 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 TNFRSF10CO14798 259 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 NUAK1O60285 661 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 SEMA7AO75326 666 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 PLCG1P19174 1290 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 GRK4P32298 578 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 CASP7P55210 303 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 LINC00310P59036 64 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 TNK2Q07912 1038 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 PWP2Q15269 919 aaKnown RBP4.05□□□□□ -1.76
PSPC1-208ENST00000635562 NR0B2Q15466 257 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 LRRFIP1Q32MZ4 808 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms