RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 DMRTB1Q96MA1 342 aa4.32□□□□□ -1.72
SMARCB1-208ENST00000634926 PWWP2AQ96N64 755 aa4.32□□□□□ -1.72
SMARCB1-208ENST00000634926 PLCD4Q9BRC7 762 aa4.32□□□□□ -1.72
SMARCB1-208ENST00000634926 PDS5BQ9NTI5 1447 aa4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 UPK3BL1B0FP48 263 aa4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 UPK3BL2E5RIL1 263 aa4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 HRKO00198 91 aa4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 ETV3P41162 512 aa4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 PLCB3Q01970 1234 aa4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 CHRNEQ04844 493 aa4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 ENOX2Q16206 610 aaKnown RBP4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 ADGRG2Q8IZP9 1017 aa4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 GPR20Q99678 358 aa4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 KRTAP3-1Q9BYR8 98 aa4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 SCAND2PQ9GZW5 306 aaPredicted RBP4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 KLHL14Q9P2G3 628 aa4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 PPM1HQ9ULR3 514 aa4.31□□□□□ -1.72
SMARCB1-208ENST00000634926 CADPSQ9ULU8 1353 aa4.3□□□□□ -1.72
SMARCB1-208ENST00000634926 A0A1B0GTL3 188 aa4.3□□□□□ -1.72
SMARCB1-208ENST00000634926 PGRP06401 933 aa4.3□□□□□ -1.72
SMARCB1-208ENST00000634926 SLURP1P55000 103 aa4.3□□□□□ -1.72
SMARCB1-208ENST00000634926 ERICH6BQ5W0A0 696 aa4.3□□□□□ -1.72
SMARCB1-208ENST00000634926 ZPBP2Q6X784 338 aa4.3□□□□□ -1.72
SMARCB1-208ENST00000634926 FERMT3Q86UX7 667 aa4.3□□□□□ -1.72
SMARCB1-208ENST00000634926 LDHDQ86WU2 507 aa4.3□□□□□ -1.72
SMARCB1-208ENST00000634926 ANKRD24Q8TF21 1146 aa4.3□□□□□ -1.72
SMARCB1-208ENST00000634926 CCDC9Q9Y3X0 531 aaKnown RBP4.3□□□□□ -1.72
SMARCB1-208ENST00000634926 PCDHA5Q9Y5H7 936 aa4.3□□□□□ -1.72
SMARCB1-208ENST00000634926 TOP2AP11388 1531 aaKnown RBP4.3□□□□□ -1.72
SMARCB1-208ENST00000634926 CFTRP13569 1480 aa4.3□□□□□ -1.72
SMARCB1-208ENST00000634926 RBM47A0AV96 593 aaKnown RBP4.29□□□□□ -1.72
SMARCB1-208ENST00000634926 NRDCO43847 1150 aa4.29□□□□□ -1.72
SMARCB1-208ENST00000634926 SLC6A19Q695T7 634 aa4.29□□□□□ -1.72
SMARCB1-208ENST00000634926 MCATQ8IVS2 390 aaKnown RBP4.29□□□□□ -1.72
SMARCB1-208ENST00000634926 HHIPL1Q96JK4 782 aa4.29□□□□□ -1.72
SMARCB1-208ENST00000634926 CORINQ9Y5Q5 1042 aa4.29□□□□□ -1.72
SMARCB1-208ENST00000634926 TACC3Q9Y6A5 838 aa4.29□□□□□ -1.72
SMARCB1-208ENST00000634926 DUSP10Q9Y6W6 482 aa4.29□□□□□ -1.72
SMARCB1-208ENST00000634926 CEP164Q9UPV0 1460 aa4.29□□□□□ -1.72
SMARCB1-208ENST00000634926 URB2Q14146 1524 aaKnown RBP4.28□□□□□ -1.72
SMARCB1-208ENST00000634926 TMEM82A0PJX8 343 aa4.28□□□□□ -1.72
SMARCB1-208ENST00000634926 FSHBP01225 129 aa4.28□□□□□ -1.72
SMARCB1-208ENST00000634926 CEBPAP49715 358 aaPredicted RBP4.28□□□□□ -1.72
SMARCB1-208ENST00000634926 DUSP4Q13115 394 aa4.28□□□□□ -1.72
SMARCB1-208ENST00000634926 ZFYVE27Q5T4F4 411 aa4.28□□□□□ -1.72
SMARCB1-208ENST00000634926 TXNDC2Q86VQ3 553 aa4.28□□□□□ -1.72
SMARCB1-208ENST00000634926 AEBP1Q8IUX7 1158 aa4.28□□□□□ -1.72
SMARCB1-208ENST00000634926 USHBP1Q8N6Y0 703 aa4.28□□□□□ -1.72
SMARCB1-208ENST00000634926 WWC3Q9ULE0 1092 aa4.28□□□□□ -1.72
SMARCB1-208ENST00000634926 PLA2G2DQ9UNK4 145 aa4.28□□□□□ -1.72
SMARCB1-208ENST00000634926 USTQ9Y2C2 406 aa4.28□□□□□ -1.72
SMARCB1-208ENST00000634926 FANCD2Q9BXW9 1451 aa4.27□□□□□ -1.73
SMARCB1-208ENST00000634926 PATL2C9JE40 543 aaKnown RBP4.27□□□□□ -1.73
SMARCB1-208ENST00000634926 K7ESM1 405 aa4.27□□□□□ -1.73
SMARCB1-208ENST00000634926 MAGEA10P43363 369 aaPredicted RBP4.27□□□□□ -1.73
SMARCB1-208ENST00000634926 LIMS1P48059 325 aa4.27□□□□□ -1.73
SMARCB1-208ENST00000634926 ERVFRD-1P60508 538 aa4.27□□□□□ -1.73
SMARCB1-208ENST00000634926 ADAM17P78536 824 aa4.27□□□□□ -1.73
SMARCB1-208ENST00000634926 TTBK2Q6IQ55 1244 aa4.27□□□□□ -1.73
SMARCB1-208ENST00000634926 MAP6Q96JE9 813 aa4.27□□□□□ -1.73
SMARCB1-208ENST00000634926 CRTAC1Q9NQ79 661 aa4.27□□□□□ -1.73
SMARCB1-208ENST00000634926 TREHO43280 583 aa4.26□□□□□ -1.73
SMARCB1-208ENST00000634926 BUB1BO60566 1050 aaPredicted RBP4.26□□□□□ -1.73
SMARCB1-208ENST00000634926 SLPIP03973 132 aa4.26□□□□□ -1.73
SMARCB1-208ENST00000634926 PNLIPP16233 465 aa4.26□□□□□ -1.73
SMARCB1-208ENST00000634926 IGFBP6P24592 240 aaPredicted RBP4.26□□□□□ -1.73
SMARCB1-208ENST00000634926 RPL10P27635 214 aaKnown RBP4.26□□□□□ -1.73
SMARCB1-208ENST00000634926 VWA3BQ502W6 1294 aa4.26□□□□□ -1.73
SMARCB1-208ENST00000634926 CEP128Q6ZU80 1094 aa4.26□□□□□ -1.73
SMARCB1-208ENST00000634926 TMC6Q7Z403 805 aa4.26□□□□□ -1.73
SMARCB1-208ENST00000634926 CYB5D2Q8WUJ1 264 aa4.26□□□□□ -1.73
SMARCB1-208ENST00000634926 SORCS2Q96PQ0 1159 aa4.26□□□□□ -1.73
SMARCB1-208ENST00000634926 KCNH3Q9ULD8 1083 aa4.26□□□□□ -1.73
SMARCB1-208ENST00000634926 RSF1Q96T23 1441 aaPredicted RBP4.26□□□□□ -1.73
SMARCB1-208ENST00000634926 GRIN3BO60391 1043 aa4.25□□□□□ -1.73
SMARCB1-208ENST00000634926 BRD1O95696 1058 aa4.25□□□□□ -1.73
SMARCB1-208ENST00000634926 PLA2G1BP04054 148 aaKnown RBP4.25□□□□□ -1.73
SMARCB1-208ENST00000634926 KCNC1P48547 511 aa4.25□□□□□ -1.73
SMARCB1-208ENST00000634926 WAPLQ7Z5K2 1190 aa4.25□□□□□ -1.73
SMARCB1-208ENST00000634926 NPM2Q86SE8 214 aaKnown RBP4.25□□□□□ -1.73
SMARCB1-208ENST00000634926 Q8N1X5 172 aa4.25□□□□□ -1.73
SMARCB1-208ENST00000634926 RNF141Q8WVD5 230 aa4.25□□□□□ -1.73
SMARCB1-208ENST00000634926 SPATA25Q9BR10 227 aa4.25□□□□□ -1.73
SMARCB1-208ENST00000634926 FOXP3Q9BZS1 431 aa4.25□□□□□ -1.73
SMARCB1-208ENST00000634926 USP17L7P0C7H9 530 aa4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 FBLN1P23142 703 aa4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 RANGAP1P46060 587 aaPredicted RBP4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 KCNA1Q09470 495 aa4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 SLC14A2Q15849 920 aa4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 ZNF827Q17R98 1081 aa4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 UBXN11Q5T124 520 aa4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 NT5DC1Q5TFE4 455 aa4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 SV2BQ7L1I2 683 aa4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 DDX1Q92499 740 aaKnown RBP4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 KREMEN1Q96MU8 473 aa4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 RBM15Q96T37 977 aaKnown RBP eCLIP4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 MENTQ9BUN1 341 aa4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 HDAC8Q9BY41 377 aa4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 SRCIN1Q9C0H9 1055 aa4.24□□□□□ -1.73
SMARCB1-208ENST00000634926 ZMYM5Q9UJ78 669 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms