RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 FAM47AQ5JRC9 791 aa23.24■■□□□ 1.31
SMARCA2-227ENST00000634760 KRT26Q7Z3Y9 468 aa23.24■■□□□ 1.31
SMARCA2-227ENST00000634760 TRIM6Q9C030 488 aaPredicted RBP23.24■■□□□ 1.31
SMARCA2-227ENST00000634760 METTL14Q9HCE5 456 aaKnown RBP23.24■■□□□ 1.31
SMARCA2-227ENST00000634760 XRCC5P13010 732 aaKnown RBP23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 ELF2Q15723 593 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 GPBP1Q86WP2 473 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 CCDC125Q86Z20 511 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 SLF1Q9BQI6 1058 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 SAR1BQ9Y6B6 198 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 NDUFAB1O14561 156 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 HPDP32754 393 aaPredicted RBP23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 TRAPPC10P48553 1259 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 CACNA2D3Q8IZS8 1091 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 SLAIN2Q9P270 581 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 PPP6R2O75170 966 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 PRPF6O94906 941 aaKnown RBP23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 SERPINA10Q9UK55 444 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 hCG_1984214I3L0E3 225 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 U2AF2P26368 475 aaKnown RBP eCLIP23.23■■□□□ 1.311e-6■■■■■ 37.6
SMARCA2-227ENST00000634760 TPD52P55327 224 aaPredicted RBP23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 RRAGAQ7L523 313 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 CEP57Q86XR8 500 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 ZNF713Q8N859 430 aaPredicted RBP23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 TPCN1Q9ULQ1 816 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 HYOU1Q9Y4L1 999 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 CFBP00751 764 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 HSPA2P54652 639 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 TMEM63CQ9P1W3 806 aa23.23■■□□□ 1.31
SMARCA2-227ENST00000634760 MAGI3Q5TCQ9 1506 aa23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 NELFCDQ8IXH7 590 aa23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 EAF2Q96CJ1 260 aaPredicted RBP23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 RUNDC3BQ96NL0 473 aa23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 LSG1Q9H089 658 aaKnown RBP23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 ATG3Q9NT62 314 aa23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 DDX39AO00148 427 aaKnown RBP23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 PSTPIP2Q9H939 334 aa23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 NT5C2P49902 561 aa23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 PPP1R21Q6ZMI0 780 aa23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 MAGI2Q86UL8 1455 aa23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 M0QZ92 97 aa23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 POLR2MP0CAP2 368 aa23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 HHATQ5VTY9 493 aa23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 NSMCE1Q8WV22 266 aa23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 SAMD9LQ8IVG5 1584 aa23.22■■□□□ 1.31
SMARCA2-227ENST00000634760 STAT1P42224 750 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 MIS12Q9H081 205 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 MAP7Q14244 749 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 TMC4Q7Z404 712 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 TYW1BQ6NUM6 668 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 CCDC105Q8IYK2 499 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 TNKSO95271 1327 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 USP17L12C9JPN9 530 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 USP17L21D6R901 530 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 I3L4J1 428 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 GOLGA8KD6RF30 607 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 MAPK8IP2Q13387 824 aaPredicted RBP23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 SPATA1Q5VX52 437 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 DENND2CQ68D51 928 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 RTEL1Q9NZ71 1219 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 TBC1D7Q9P0N9 293 aa23.21■■□□□ 1.31
SMARCA2-227ENST00000634760 GBP6Q6ZN66 633 aa23.2■■□□□ 1.31
SMARCA2-227ENST00000634760 PANK4Q9NVE7 773 aa23.2■■□□□ 1.31
SMARCA2-227ENST00000634760 SLC5A4Q9NY91 659 aa23.2■■□□□ 1.31
SMARCA2-227ENST00000634760 RASA3Q14644 834 aa23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 MFSD14BQ5SR56 506 aa23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 CEP85LQ5SZL2 805 aa23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 FOSP01100 380 aaPredicted RBP23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 FAM98CQ17RN3 349 aaKnown RBP23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 MAP4K1Q92918 833 aa23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 CARD10Q9BWT7 1032 aa23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 FOXP1Q9H334 677 aaPredicted RBP23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 KIF11P52732 1056 aa23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 NOD1Q9Y239 953 aa23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 ZNF500O60304 480 aaPredicted RBP23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 LONRF2Q1L5Z9 754 aa23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 TPH2Q8IWU9 490 aa23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 DEPTORQ8TB45 409 aa23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 TEKT3Q9BXF9 490 aa23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 NDUFB9Q9Y6M9 179 aa23.2■■□□□ 1.3
SMARCA2-227ENST00000634760 ZMYM1Q5SVZ6 1142 aa23.19■■□□□ 1.3
SMARCA2-227ENST00000634760 CCDC62Q6P9F0 684 aa23.19■■□□□ 1.3
SMARCA2-227ENST00000634760 KLHL7Q8IXQ5 586 aa23.19■■□□□ 1.3
SMARCA2-227ENST00000634760 UBE2Q2Q8WVN8 375 aa23.19■■□□□ 1.3
SMARCA2-227ENST00000634760 IGSF1Q8N6C5 1336 aa23.19■■□□□ 1.3
SMARCA2-227ENST00000634760 CDK12Q9NYV4 1490 aaPredicted RBP23.19■■□□□ 1.3
SMARCA2-227ENST00000634760 NEDD9Q14511 834 aa23.19■■□□□ 1.3
SMARCA2-227ENST00000634760 PNMA1Q8ND90 353 aa23.19■■□□□ 1.3
SMARCA2-227ENST00000634760 PREX2Q70Z35 1606 aa23.19■■□□□ 1.3
SMARCA2-227ENST00000634760 USP28Q96RU2 1077 aa23.19■■□□□ 1.3
SMARCA2-227ENST00000634760 DDX25Q9UHL0 483 aaKnown RBP23.19■■□□□ 1.3
SMARCA2-227ENST00000634760 CCDC160A6NGH7 325 aa23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 RPN1P04843 607 aaKnown RBP23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 INPP5BP32019 993 aa23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 C10orf67Q8IYJ2 551 aa23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 TRMT44Q8IYL2 757 aaKnown RBP23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 TBC1D31Q96DN5 1066 aa23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 TRPC6Q9Y210 931 aa23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 C2CD5Q86YS7 1000 aa23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 HAUS4Q9H6D7 363 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms