RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 POLR3KQ9Y2Y1 108 aaPredicted RBP7.98□□□□□ -1.13
LINC00254-202ENST00000633813 PCDHGB7Q9Y5F8 929 aa7.98□□□□□ -1.13
LINC00254-202ENST00000633813 KANK1Q14678 1352 aa7.97□□□□□ -1.13
LINC00254-202ENST00000633813 ANKRD30BQ9BXX2 1392 aa7.97□□□□□ -1.13
LINC00254-202ENST00000633813 PRNPP04156 253 aa7.97□□□□□ -1.13
LINC00254-202ENST00000633813 CEACAM5P06731 702 aa7.97□□□□□ -1.13
LINC00254-202ENST00000633813 ZNF165P49910 485 aa7.97□□□□□ -1.13
LINC00254-202ENST00000633813 OXCT1P55809 520 aa7.97□□□□□ -1.13
LINC00254-202ENST00000633813 IFI16Q16666 785 aaKnown RBP7.97□□□□□ -1.13
LINC00254-202ENST00000633813 SEZ6Q53EL9 994 aa7.97□□□□□ -1.13
LINC00254-202ENST00000633813 SFRP5Q5T4F7 317 aa7.97□□□□□ -1.13
LINC00254-202ENST00000633813 DPH2Q9BQC3 489 aaPredicted RBP7.97□□□□□ -1.13
LINC00254-202ENST00000633813 BRMS1Q9HCU9 246 aa7.97□□□□□ -1.13
LINC00254-202ENST00000633813 DDX41Q9UJV9 622 aaKnown RBP7.97□□□□□ -1.13
LINC00254-202ENST00000633813 FRMPD1Q5SYB0 1578 aa7.97□□□□□ -1.13
LINC00254-202ENST00000633813 YEATS2Q9ULM3 1422 aa7.96□□□□□ -1.13
LINC00254-202ENST00000633813 ATP10AO60312 1499 aa7.96□□□□□ -1.13
LINC00254-202ENST00000633813 MCM4P33991 863 aa7.96□□□□□ -1.14
LINC00254-202ENST00000633813 ETV3P41162 512 aa7.96□□□□□ -1.14
LINC00254-202ENST00000633813 CRKP46108 304 aa7.96□□□□□ -1.14
LINC00254-202ENST00000633813 FAM214BQ7L5A3 538 aa7.96□□□□□ -1.14
LINC00254-202ENST00000633813 SLFN12Q8IYM2 578 aa7.96□□□□□ -1.14
LINC00254-202ENST00000633813 REXO1Q8N1G1 1221 aaKnown RBP7.96□□□□□ -1.14
LINC00254-202ENST00000633813 CYB5D2Q8WUJ1 264 aa7.96□□□□□ -1.14
LINC00254-202ENST00000633813 HEXIM2Q96MH2 286 aaKnown RBP7.96□□□□□ -1.14
LINC00254-202ENST00000633813 KLHL3Q9UH77 587 aa7.96□□□□□ -1.14
LINC00254-202ENST00000633813 PCDHB14Q9Y5E9 798 aa7.96□□□□□ -1.14
LINC00254-202ENST00000633813 UNC13BO14795 1591 aa7.96□□□□□ -1.14
LINC00254-202ENST00000633813 EIF2AK4Q9P2K8 1649 aaKnown RBP7.96□□□□□ -1.14
LINC00254-202ENST00000633813 FAM135AQ9P2D6 1515 aa7.95□□□□□ -1.14
LINC00254-202ENST00000633813 TMEM265A0A087WTH1 108 aa7.95□□□□□ -1.14
LINC00254-202ENST00000633813 ATE1O95260 518 aa7.95□□□□□ -1.14
LINC00254-202ENST00000633813 ITIH2P19823 946 aa7.95□□□□□ -1.14
LINC00254-202ENST00000633813 GGT6Q6P531 493 aa7.95□□□□□ -1.14
LINC00254-202ENST00000633813 METTL16Q86W50 562 aaKnown RBP7.95□□□□□ -1.14
LINC00254-202ENST00000633813 NT5DC4Q86YG4 428 aa7.95□□□□□ -1.14
LINC00254-202ENST00000633813 SLITRK4Q8IW52 837 aa7.95□□□□□ -1.14
LINC00254-202ENST00000633813 PLD6Q8N2A8 252 aaKnown RBP7.95□□□□□ -1.14
LINC00254-202ENST00000633813 EAF1Q96JC9 268 aaPredicted RBP7.95□□□□□ -1.14
LINC00254-202ENST00000633813 FBXL18Q96ME1 805 aa7.95□□□□□ -1.14
LINC00254-202ENST00000633813 CCDC39Q9UFE4 941 aa7.95□□□□□ -1.14
LINC00254-202ENST00000633813 DIP2CQ9Y2E4 1556 aa7.94□□□□□ -1.14
LINC00254-202ENST00000633813 ABCA6Q8N139 1617 aa7.94□□□□□ -1.14
LINC00254-202ENST00000633813 RBM25P49756 843 aaKnown RBP7.94□□□□□ -1.14
LINC00254-202ENST00000633813 HDLBPQ00341 1268 aaKnown RBP7.94□□□□□ -1.14
LINC00254-202ENST00000633813 C22orf34Q6ZV56 151 aa7.94□□□□□ -1.14
LINC00254-202ENST00000633813 HRASLS5Q96KN8 279 aa7.94□□□□□ -1.14
LINC00254-202ENST00000633813 SLC5A6Q9Y289 635 aa7.94□□□□□ -1.14
LINC00254-202ENST00000633813 SNX11Q9Y5W9 270 aa7.94□□□□□ -1.14
LINC00254-202ENST00000633813 IQGAP3Q86VI3 1631 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 LOC100996750A0A140TA64 210 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 UPK3BL1B0FP48 263 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 UPK3BL2E5RIL1 263 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 KIR3DL1P43629 444 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 CHMP4BP1P59074 171 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 RACK1P63244 317 aaKnown RBP7.93□□□□□ -1.14
LINC00254-202ENST00000633813 GK5Q6ZS86 529 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 CDH24Q86UP0 819 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 PHACTR4Q8IZ21 702 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 MFSD4AQ8N468 514 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 RIN3Q8TB24 985 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 SPATA32Q96LK8 384 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 CCDC74BQ96LY2 380 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 EHMT1Q9H9B1 1298 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 GMIPQ9P107 970 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 VAV3Q9UKW4 847 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 CEP131Q9UPN4 1083 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 WASHC2CQ9Y4E1 1318 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 VWDEQ8N2E2 1590 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 REREQ9P2R6 1566 aa7.93□□□□□ -1.14
LINC00254-202ENST00000633813 DEPDC5O75140 1603 aa7.92□□□□□ -1.14
LINC00254-202ENST00000633813 FAM155AB1AL88 458 aaPredicted RBP7.92□□□□□ -1.14
LINC00254-202ENST00000633813 CHURC1-FNTBB4DL54 471 aa7.92□□□□□ -1.14
LINC00254-202ENST00000633813 ZNF865P0CJ78 1059 aaPredicted RBP7.92□□□□□ -1.14
LINC00254-202ENST00000633813 TNNI2P48788 182 aa7.92□□□□□ -1.14
LINC00254-202ENST00000633813 CLCN7P51798 805 aa7.92□□□□□ -1.14
LINC00254-202ENST00000633813 GP2P55259 537 aaKnown RBP7.92□□□□□ -1.14
LINC00254-202ENST00000633813 PRKCQQ04759 706 aa7.92□□□□□ -1.14
LINC00254-202ENST00000633813 LRRFIP1Q32MZ4 808 aaKnown RBP7.92□□□□□ -1.14
LINC00254-202ENST00000633813 AGBL5Q8NDL9 886 aa7.92□□□□□ -1.14
LINC00254-202ENST00000633813 FLCNQ8NFG4 579 aa7.92□□□□□ -1.14
LINC00254-202ENST00000633813 TNKS2Q9H2K2 1166 aa7.92□□□□□ -1.14
LINC00254-202ENST00000633813 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.92□□□□□ -1.14
LINC00254-202ENST00000633813 TONSLQ96HA7 1378 aa7.92□□□□□ -1.14
LINC00254-202ENST00000633813 AGLP35573 1532 aa7.92□□□□□ -1.14
LINC00254-202ENST00000633813 PRDM15P57071 1507 aaPredicted RBP7.92□□□□□ -1.14
LINC00254-202ENST00000633813 BCORL1Q5H9F3 1711 aa7.92□□□□□ -1.14
LINC00254-202ENST00000633813 IMPDH2P12268 514 aa7.91□□□□□ -1.14
LINC00254-202ENST00000633813 RAG1P15918 1043 aa7.91□□□□□ -1.14
LINC00254-202ENST00000633813 C9orf131Q5VYM1 1079 aa7.91□□□□□ -1.14
LINC00254-202ENST00000633813 TP53INP2Q8IXH6 220 aa7.91□□□□□ -1.14
LINC00254-202ENST00000633813 BCL7CQ8WUZ0 217 aaPredicted RBP7.91□□□□□ -1.14
LINC00254-202ENST00000633813 TGIF2Q9GZN2 237 aa7.91□□□□□ -1.14
LINC00254-202ENST00000633813 PLAGL2Q9UPG8 496 aa7.91□□□□□ -1.14
LINC00254-202ENST00000633813 U3KQE9 123 aa7.91□□□□□ -1.14
LINC00254-202ENST00000633813 RPRD2Q5VT52 1461 aaKnown RBP7.91□□□□□ -1.14
LINC00254-202ENST00000633813 LMTK2Q8IWU2 1503 aa7.91□□□□□ -1.14
LINC00254-202ENST00000633813 RNF17Q9BXT8 1623 aaKnown RBP7.91□□□□□ -1.14
LINC00254-202ENST00000633813 MROH1Q8NDA8 1641 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms