RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 FAM160B2Q86V87 743 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 PRPF38AQ8NAV1 312 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 SHCBP1Q8NEM2 672 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 CHURC1Q8WUH1 139 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 DCAF4Q8WV16 495 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 SLF1Q9BQI6 1058 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 PAGR1Q9BTK6 254 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 NBPF3Q9H094 633 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 IL25Q9H293 177 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 ANO2Q9NQ90 1003 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 IL17RBQ9NRM6 502 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 RBPJLQ9UBG7 517 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 PPP1R9AQ9ULJ8 1098 aa16.48■□□□□ 0.23
SNRPA1-216ENST00000626000 NEDD4P46934 1319 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 PARP14Q460N5 1801 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 EPB41L2O43491 1005 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 KDM4AO75164 1064 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 REC8O95072 547 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 BMP3P12645 472 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 SLC1A4P43007 532 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 STAT2P52630 851 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 PTH1RQ03431 593 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 FAM83BQ5T0W9 1011 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 TRMT44Q8IYL2 757 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 LRRC47Q8N1G4 583 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 NCOA7Q8NI08 942 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 RAET1EQ8TD07 263 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 MTA3Q9BTC8 594 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 PNMA2Q9UL42 364 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 ADAMTS5Q9UNA0 930 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 HPS5Q9UPZ3 1129 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 CTDP1Q9Y5B0 961 aaPredicted RBP16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 RBM8AQ9Y5S9 174 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 IVNS1ABPQ9Y6Y0 642 aa16.47■□□□□ 0.23
SNRPA1-216ENST00000626000 ERICH2A1L162 156 aa16.46■□□□□ 0.23
SNRPA1-216ENST00000626000 B4E1Z4 1266 aa16.46■□□□□ 0.23
SNRPA1-216ENST00000626000 SLC25A27O95847 323 aa16.46■□□□□ 0.23
SNRPA1-216ENST00000626000 CYP21A2P08686 494 aa16.46■□□□□ 0.23
SNRPA1-216ENST00000626000 SLC9C1Q4G0N8 1177 aa16.46■□□□□ 0.23
SNRPA1-216ENST00000626000 SLAIN1Q8ND83 568 aa16.46■□□□□ 0.23
SNRPA1-216ENST00000626000 ANKS1AQ92625 1134 aa16.46■□□□□ 0.23
SNRPA1-216ENST00000626000 ZSCAN10Q96SZ4 725 aaPredicted RBP16.46■□□□□ 0.23
SNRPA1-216ENST00000626000 MROH8Q9H579 483 aa16.46■□□□□ 0.23
SNRPA1-216ENST00000626000 RLFQ13129 1914 aa16.45■□□□□ 0.22
SNRPA1-216ENST00000626000 STRNO43815 780 aa16.45■□□□□ 0.22
SNRPA1-216ENST00000626000 ZKSCAN1P17029 563 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-216ENST00000626000 OAZ1P54368 228 aa16.45■□□□□ 0.22
SNRPA1-216ENST00000626000 KIAA1755Q5JYT7 1200 aa16.45■□□□□ 0.22
SNRPA1-216ENST00000626000 PXYLP1Q8TE99 480 aa16.45■□□□□ 0.22
SNRPA1-216ENST00000626000 ARMC5Q96C12 935 aa16.45■□□□□ 0.22
SNRPA1-216ENST00000626000 NUDT12Q9BQG2 462 aa16.45■□□□□ 0.22
SNRPA1-216ENST00000626000 ARHGAP39Q9C0H5 1083 aa16.45■□□□□ 0.22
SNRPA1-216ENST00000626000 LSG1Q9H089 658 aaKnown RBP16.45■□□□□ 0.22
SNRPA1-216ENST00000626000 SPATC1LQ9H0A9 340 aa16.45■□□□□ 0.22
SNRPA1-216ENST00000626000 TXNRD2Q9NNW7 524 aa16.45■□□□□ 0.22
SNRPA1-216ENST00000626000 INCENPQ9NQS7 918 aa16.45■□□□□ 0.22
SNRPA1-216ENST00000626000 VWA5AO00534 786 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 ATP2A1O14983 1001 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 NMT2O60551 498 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 ZBED4O75132 1171 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 XRCC5P13010 732 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 CAPN2P17655 700 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 IKQ13123 557 aaPredicted RBP16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 KRT32Q14532 448 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 GPATCH4Q5T3I0 446 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 PLEKHH3Q7Z736 793 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 ATG4CQ96DT6 458 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 TMEM47Q9BQJ4 181 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 TEX13BQ9BXU2 312 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 KAT14Q9H8E8 782 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 SLC5A4Q9NY91 659 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 ZSWIM5Q9P217 1185 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 ISY1Q9ULR0 285 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 TACC3Q9Y6A5 838 aa16.44■□□□□ 0.22
SNRPA1-216ENST00000626000 E7EWF7 191 aa16.43■□□□□ 0.22
SNRPA1-216ENST00000626000 GRK4P32298 578 aa16.43■□□□□ 0.22
SNRPA1-216ENST00000626000 FLT3LGP49771 235 aa16.43■□□□□ 0.22
SNRPA1-216ENST00000626000 UBXN2AP68543 259 aa16.43■□□□□ 0.22
SNRPA1-216ENST00000626000 PRKCZQ05513 592 aa16.43■□□□□ 0.22
SNRPA1-216ENST00000626000 IFIT1BQ5T764 474 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-216ENST00000626000 SKAP1Q86WV1 359 aa16.43■□□□□ 0.22
SNRPA1-216ENST00000626000 ABRAQ8N0Z2 381 aa16.43■□□□□ 0.22
SNRPA1-216ENST00000626000 PTCH2Q9Y6C5 1203 aa16.43■□□□□ 0.22
SNRPA1-216ENST00000626000 TNKSO95271 1327 aa16.43■□□□□ 0.22
SNRPA1-216ENST00000626000 ZNF236Q9UL36 1845 aa16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 SLC15A5A6NIM6 579 aa16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 CNMDO75829 334 aa16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 MCCP23508 829 aa16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 CTGFP29279 349 aa16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 RGS2P41220 211 aa16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 PLS1Q14651 629 aa16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 NECTIN1Q15223 517 aa16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 CCDC96Q2M329 555 aa16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 GPR142Q7Z601 462 aa16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 RIOX2Q8IUF8 465 aa16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 ENAHQ8N8S7 591 aaPredicted RBP16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 PNMA1Q8ND90 353 aa16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 NUP88Q99567 741 aaPredicted RBP16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 BTBD7Q9P203 1132 aa16.42■□□□□ 0.22
SNRPA1-216ENST00000626000 FBXO40Q9UH90 709 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms