RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 CTR9Q6PD62 1173 aa17.23■□□□□ 0.35
LINC00552-201ENST00000625151 RASGRP2Q7LDG7 609 aa17.23■□□□□ 0.35
LINC00552-201ENST00000625151 MTRQ99707 1265 aa17.23■□□□□ 0.35
LINC00552-201ENST00000625151 BRIP1Q9BX63 1249 aa17.23■□□□□ 0.35
LINC00552-201ENST00000625151 FGRP09769 529 aa17.23■□□□□ 0.35
LINC00552-201ENST00000625151 ARFGAP3Q9NP61 516 aa17.23■□□□□ 0.35
LINC00552-201ENST00000625151 VEGFAP15692 232 aaPredicted RBP17.22■□□□□ 0.35
LINC00552-201ENST00000625151 TXLNAP40222 546 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 KRT31Q15323 416 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 IL17AQ16552 155 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 RREB1Q92766 1687 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 CCDC66A2RUB6 948 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 KIF5CO60282 957 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 DDAH1O94760 285 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 CALM1P0DP23 149 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 CALM2P0DP24 149 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 CALM3P0DP25 149 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 CHMP4BP1P59074 171 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 PDXDC2PQ6P474 469 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 PIK3AP1Q6ZUJ8 805 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 C3orf67Q6ZVT6 689 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 SRGAP1Q7Z6B7 1085 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 CNGA4Q8IV77 575 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 ACRBPQ8NEB7 543 aa17.22■□□□□ 0.35
LINC00552-201ENST00000625151 ZCCHC17Q9NP64 241 aaKnown RBP17.22■□□□□ 0.35
LINC00552-201ENST00000625151 GNL3LQ9NVN8 582 aaKnown RBP17.22■□□□□ 0.35
LINC00552-201ENST00000625151 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.22■□□□□ 0.35
LINC00552-201ENST00000625151 ITIH6Q6UXX5 1313 aa17.21■□□□□ 0.35
LINC00552-201ENST00000625151 USP17L12C9JPN9 530 aa17.21■□□□□ 0.35
LINC00552-201ENST00000625151 USP17L21D6R901 530 aa17.21■□□□□ 0.35
LINC00552-201ENST00000625151 RNF225M0QZC1 329 aaPredicted RBP17.21■□□□□ 0.35
LINC00552-201ENST00000625151 ABL1P00519 1130 aa17.21■□□□□ 0.35
LINC00552-201ENST00000625151 FECHP22830 423 aa17.21■□□□□ 0.35
LINC00552-201ENST00000625151 OAS2P29728 719 aaKnown RBP17.21■□□□□ 0.35
LINC00552-201ENST00000625151 CDC25AP30304 524 aa17.21■□□□□ 0.35
LINC00552-201ENST00000625151 ZNF569Q5MCW4 686 aa17.21■□□□□ 0.35
LINC00552-201ENST00000625151 RRAGBQ5VZM2 374 aa17.21■□□□□ 0.35
LINC00552-201ENST00000625151 IQUBQ8NA54 791 aa17.21■□□□□ 0.35
LINC00552-201ENST00000625151 CDC5LQ99459 802 aaKnown RBP17.21■□□□□ 0.35
LINC00552-201ENST00000625151 FUT8Q9BYC5 575 aa17.21■□□□□ 0.35
LINC00552-201ENST00000625151 PUF60Q9UHX1 559 aaKnown RBP17.21■□□□□ 0.35
LINC00552-201ENST00000625151 LAMB1P07942 1786 aa17.21■□□□□ 0.35
LINC00552-201ENST00000625151 ERVK-24P63145 666 aa17.21■□□□□ 0.35
LINC00552-201ENST00000625151 VPS16Q9H269 839 aa17.21■□□□□ 0.35
LINC00552-201ENST00000625151 LIMA1Q9UHB6 759 aaKnown RBP17.21■□□□□ 0.35
LINC00552-201ENST00000625151 MCM7P33993 719 aa17.2■□□□□ 0.34
LINC00552-201ENST00000625151 SMC1AQ14683 1233 aaKnown RBP17.2■□□□□ 0.34
LINC00552-201ENST00000625151 LINC00116Q8NCU8 138 aa17.2■□□□□ 0.34
LINC00552-201ENST00000625151 CDC23Q9UJX2 597 aa17.2■□□□□ 0.34
LINC00552-201ENST00000625151 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.2■□□□□ 0.34
LINC00552-201ENST00000625151 N4BP3O15049 544 aa17.2■□□□□ 0.34
LINC00552-201ENST00000625151 TFRCP02786 760 aaKnown RBP17.2■□□□□ 0.34
LINC00552-201ENST00000625151 FAM47AQ5JRC9 791 aa17.2■□□□□ 0.34
LINC00552-201ENST00000625151 CTCFLQ8NI51 663 aaPredicted RBP17.2■□□□□ 0.34
LINC00552-201ENST00000625151 CCDC51Q96ER9 411 aa17.2■□□□□ 0.34
LINC00552-201ENST00000625151 ANKZF1Q9H8Y5 726 aa17.2■□□□□ 0.34
LINC00552-201ENST00000625151 BTAF1O14981 1849 aa17.2■□□□□ 0.34
LINC00552-201ENST00000625151 SCG2P13521 617 aa17.19■□□□□ 0.34
LINC00552-201ENST00000625151 NLRP5P59047 1200 aa17.19■□□□□ 0.34
LINC00552-201ENST00000625151 UBE4AQ14139 1066 aa17.19■□□□□ 0.34
LINC00552-201ENST00000625151 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
LINC00552-201ENST00000625151 SLC35F6Q8N357 371 aa17.19■□□□□ 0.34
LINC00552-201ENST00000625151 FAM84BQ96KN1 310 aaPredicted RBP17.19■□□□□ 0.34
LINC00552-201ENST00000625151 ABHD10Q9NUJ1 306 aa17.19■□□□□ 0.34
LINC00552-201ENST00000625151 TAB2Q9NYJ8 693 aa17.19■□□□□ 0.34
LINC00552-201ENST00000625151 RWDD2AQ9UIY3 292 aa17.19■□□□□ 0.34
LINC00552-201ENST00000625151 CCDC151A5D8V7 595 aa17.19■□□□□ 0.34
LINC00552-201ENST00000625151 LRRC10BA6NIK2 292 aa17.19■□□□□ 0.34
LINC00552-201ENST00000625151 GTPBP6O43824 516 aaPredicted RBP17.19■□□□□ 0.34
LINC00552-201ENST00000625151 COPB1P53618 953 aaKnown RBP17.19■□□□□ 0.34
LINC00552-201ENST00000625151 PAK1Q13153 545 aa17.19■□□□□ 0.34
LINC00552-201ENST00000625151 LONRF2Q1L5Z9 754 aa17.19■□□□□ 0.34
LINC00552-201ENST00000625151 PCP11498 1178 aaKnown RBP17.18■□□□□ 0.34
LINC00552-201ENST00000625151 ST5P78524 1137 aa17.18■□□□□ 0.34
LINC00552-201ENST00000625151 CAVIN4Q5BKX8 364 aa17.18■□□□□ 0.34
LINC00552-201ENST00000625151 NELFBQ8WX92 580 aa17.18■□□□□ 0.34
LINC00552-201ENST00000625151 SMARCC1Q92922 1105 aaPredicted RBP17.18■□□□□ 0.34
LINC00552-201ENST00000625151 BRWD3Q6RI45 1802 aa17.18■□□□□ 0.34
LINC00552-201ENST00000625151 KIF4BQ2VIQ3 1234 aa17.18■□□□□ 0.34
LINC00552-201ENST00000625151 ERFEQ4G0M1 354 aa17.18■□□□□ 0.34
LINC00552-201ENST00000625151 TCP11X2Q5H9J9 407 aa17.18■□□□□ 0.34
LINC00552-201ENST00000625151 JAKMIP3Q5VZ66 844 aa17.18■□□□□ 0.34
LINC00552-201ENST00000625151 TMTC1Q8IUR5 882 aa17.18■□□□□ 0.34
LINC00552-201ENST00000625151 TTF2Q9UNY4 1162 aaKnown RBP17.18■□□□□ 0.34
LINC00552-201ENST00000625151 MAPK8IP1Q9UQF2 711 aa17.18■□□□□ 0.34
LINC00552-201ENST00000625151 GDAQ9Y2T3 454 aa17.18■□□□□ 0.34
LINC00552-201ENST00000625151 SBF2Q86WG5 1849 aa17.18■□□□□ 0.34
LINC00552-201ENST00000625151 KCNJ18B7U540 433 aa17.17■□□□□ 0.34
LINC00552-201ENST00000625151 CYP2D6P10635 497 aa17.17■□□□□ 0.34
LINC00552-201ENST00000625151 KLRK1P26718 216 aa17.17■□□□□ 0.34
LINC00552-201ENST00000625151 TRAPPC10P48553 1259 aa17.17■□□□□ 0.34
LINC00552-201ENST00000625151 KCNJ12Q14500 433 aa17.17■□□□□ 0.34
LINC00552-201ENST00000625151 PFKFB3Q16875 520 aaPredicted RBP17.17■□□□□ 0.34
LINC00552-201ENST00000625151 ZNF658Q5TYW1 1059 aaPredicted RBP17.17■□□□□ 0.34
LINC00552-201ENST00000625151 NHSQ6T4R5 1651 aa17.17■□□□□ 0.34
LINC00552-201ENST00000625151 CEP112Q8N8E3 955 aa17.17■□□□□ 0.34
LINC00552-201ENST00000625151 NSUN4Q96CB9 384 aaKnown RBP17.17■□□□□ 0.34
LINC00552-201ENST00000625151 PNKPQ96T60 521 aa17.17■□□□□ 0.34
LINC00552-201ENST00000625151 NUP88Q99567 741 aaPredicted RBP17.17■□□□□ 0.34
LINC00552-201ENST00000625151 KIAA1551Q9HCM1 1747 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms